Larimichthys crocea (large yellow croaker): 104922502
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Entry
104922502 CDS
T04659
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104922502
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104922502
Membrane trafficking [BR:
lco04131
]
Protein recycling
Others
Others
104922502
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
104922502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
PDZ_2
SNX17-31_F2_FERM
VirE3
USP7_C2
SNX17_FERM_C
Motif
Other DBs
NCBI-GeneID:
104922502
NCBI-ProteinID:
XP_010733640
UniProt:
A0A6G0IC13
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All DBs
Position
XIII:complement(15979495..15990092)
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AA seq
571 aa
AA seq
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MADVEGQGVCSSVPPLPQPSSRNGSGSGNVTPGTGGSCQTATTVTSGPRLVRIVKSDSGY
GFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGAT
HKQVVDLIRAGERELVLAVLSVPPQEADCLDPGDDVSAQSCYDYSDKQAVPISVPSYKHT
ELNQEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFVNFTFPKLPGKWPFSLSEQQLD
ARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTLTVRVRK
NSTTDQVYQAVVMKLGMDSVTASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIPGT
CLTLRKWLFTTEEEILLNDNQLAVNYFFHQAMDDVKKGFIKAEQKSYQLQKLAEQKKMSM
YLSLLRGCEGYNEIIFPHCSCDSRRKGHVITAISIHHFKLHACTEEGTLENQVIAFDWGE
MQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATD
KDNKNCSKDEYFPAVEAQKGWRHLGREIVTS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggacagggggtttgttcatcggtccctccgttgcctcagccttcc
tctcgtaacggctccggtagcggtaacgttacaccgggcaccggcggcagctgccagacg
gcaaccaccgttacctcaggcccacggctagtccggatagtgaagtccgactcgggatat
ggtttcaatgttcggggacaagttagtgaaggtgggcaactacggagtattaacggggaa
ctgtacgctccgctgcaacacgttagtgccgtgctaccgggaggtgccgccgacagagcc
ggtatctcgaagggggaccggatccttgaagttaatggcgtgaatgtagagggagcgacc
cacaagcaggtggtggacctgatccgggctggagagagggagctggtcctggccgtgctg
tcagtaccaccgcaggaggctgactgtctggatcccggagacgatgtttcagcacagtcc
tgctatgactactctgacaagcaggcagtcccgatctctgtgccgagctacaaacacact
gagctcaaccaagaaaaatttgtggtatataacgtgtacatggcaggcaggcagctatgc
tccaaacgttaccgcgagtttgtgatcctgcaccaaaacttaaagagggagtttgtcaac
tttacgttccccaagctacctgggaaatggccattttccctgtcggagcagcagttggac
gcgcgacgcagaggcctggaggaatacctggagaaagtgtgctctgtgcgggtaatcgga
gaaagtgacatcatgcaggagttcctctctgagtcagatgagaactataacggcgtgtcc
gatgtggagttgagaatagccatgcccgataaaaccacgctcactgtcagagttcgcaaa
aactccaccacagatcaggtctatcaggccgtggtcatgaaactagggatggacagtgta
acagccagctactttgctctttttgaggtcatcaaccacacctttgtgcgtaagcttgcc
cccaacgagttcccccacaaactctatgtacagaactatacctcagccatcccaggaacc
tgcctcaccttgcgcaagtggctctttactacagaagaggagattctgctcaacgacaac
cagcttgctgtgaactacttctttcaccaggcaatggatgatgtgaagaaaggcttcatc
aaagcagagcagaagtcctaccagctgcaaaagctagcagagcagaagaagatgtccatg
tacctcagtttgttgaggggttgcgaaggctacaatgagatcatattcccccactgttcc
tgtgactcccgacgcaaaggccacgtcattacagccatcagcattcaccacttcaagctg
cacgcctgcaccgaggaagggacactcgagaaccaggtgattgcgtttgactggggggag
atgcagaggtgggacacagatgaagagggcatggccttctgttttgaatatgcgcgagga
gagaagaaaccacgctgggtcaagatatttacgccctatttcaactatatgcatgagtgc
ttcgaaagagtcttctgtgagctgaagtggaggaaggaggtggaagaggaggctacagac
aaggacaataagaactgcagtaaagatgaatattttccagctgttgaggcacagaaggga
tggaggcacctaggaagggagatcgttacctcttaa
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