Larimichthys crocea (large yellow croaker): 104922558
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Entry
104922558 CDS
T04659
Symbol
fndc1
Name
(RefSeq) fibronectin type III domain-containing protein 1
KO
K24484
fibronectin type III domain-containing protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104922558 (fndc1)
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
104922558 (fndc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_DSCAM-DSCAML_C
CRLF2-like_D2
Pur_ac_phosph_N
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
104922558
NCBI-ProteinID:
XP_027140085
LinkDB
All DBs
Position
XI:complement(8527315..8564557)
Genome browser
AA seq
1839 aa
AA seq
DB search
MALAASRTLLALFVTFCAPGYGLTAEKPLRSNNGKQTAVDKGLRESWEPSIHLDGRPVDR
VISSSKPPKSHRFPKVGKDSRSHLLEDVDPEWVNLDGFAVLGGAPVSNSSAGPVRPPQIV
ARNQPSVQRATRVDRTARPLGVSNTRTHRRAPQSSSGPRQPERVLAGTPLLERRRQHHTK
PQSDQRNRRAQKLTSESVHVVSLQAQKSTGQSSPSNRAVATKTTTPEPPVYEARDISVRV
MSPQSVLISWVDPAVEMGKVDPDEPRSYTIRYREKGESARWEYKDNNQRRMMIDNLSADS
MYEFSVRISQREKQGKWSVSVFQRTPESAPSGPPENFEVKPLRGKGTAVIATWDPPEEPN
GRIREYILSYAPAMKPFGMKSVTHRGSTTSATIDGLTPGDRYIFKIRATNRRGQGPQSKV
LSVVMPGSSSSASSSKTSRRTSHTPSKQDTDHDESDNEPTEEPEEPTTPSQPRPAVNRRV
RPLSQTRSYHSIFSAVRGSVRNTGNRGKVQAREEEEEEENIPTTPPPVEETTTMEAVPET
TEPDNNVSPEEPLTTETPSLKVLTPSPTKPSHPKPPPRRPIKIRVHQKPKTGSSSSSSDS
SSSSTSSSGSSSSSTSSSGSSSSTSSSSSSGSSTSSSSSSSSPSSTSLSPSSRVQESAAS
RKDYVASTYPESKNSYDKPSITHAKPSTAVVKESNSQQTEPVSMGRGLTLAARTNGTGFG
SRYGYSRRYPGILSRGNSTRMLNGYKPAIVSQSNLPSRTQNQATSNTRTSATSQSTLPDR
TQNHRTSQTLNSATSRSTSQSGTHNQATSDPYNYDKSQSTSESRSQGSTTLQNSGTNPST
SQSSSNHPSNIDLSGSSRSTSHRGSHDSASSRNTQSSHTSPEQDTAVREGNDNRYQKNTD
AEVTKNEEPTLSSTPQHTEEEKREEEGKEKSNNGKTVVSRTRISPSLVERFPWLASRYPG
RFGTGTRASSTRQDSRTPLTRTSSSIGAGTPILRGTPTRVSGATGAAGVSRIQETSEDLR
NPSTLDSLKNGVGVSSVKPSLTNKNTASSDSRNPTTSSSSSSSSLNRGHGDSREPILRGT
SNDNDNDYNKESLNERSGDISGKNDKFADPTAAQKNPTVTSTDPHRNVEDNQSVDTSSRT
RSGSPSGVTPTHRRPGAGVNGRGRSPLLANRQFGGSRTPIRPQPVQNSRQGSSTSDSSLS
SPDTSSSSKLPQPVLTSDRDVGSGTTVTKTGGLIGGNSQSTSSASSSPSRDSFRGMGGRP
RYPILRGKPINGGQLKPVNGNGKNGRPNLTATNEKESSPSQGTSKAVGQRYITGPDGTKW
VVDLERGVLMNQDGQVLQDSQGKPKRVVLGEDGRTIFDRMGTPLVNEEGMALFGHGRDSR
PVVNPKDKVLMVGGKPLLGLDVSRSRTTTPTTTTTTTTTTMAPTTTPEPTTIDWYIEDST
TMLPYPTCPPGTFSKTDEYGYPMLDSEGILDCYPEEESSGMETDHMPDALGLEKDELIIQ
TTLPPTTTTTTTTTTTTTTTASTTTTTEITTPQRETKPLNKGPSSEFDLSGKKRFTASYV
NYIRKDPGAPCSLTEALEYLQVDVLENLIEKDSLAANQPPKNKPHNFTVVAMEGCHSFII
LDWGRPLKDDMVSGYMVHSASYDDVLNNRWSSRSSSGTHLPVENLKPNSRYYFKVQAKNV
FGLGPVSDTLTYVTESDDPLLIERPPGGEPIWVPFTFKYNSAHSSCKGSQYVKRTWYRKF
VGVVLCNSLRYKIFMGDGLREPFYSIGDTFGQGEDHCQFVDSYMDGRTGPAYLSNNLPTA
QGFYRAYRQEPVTFGVIGRRTSHPFVGWYECGVPIPGKW
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggctttagccgcaagcaggacgctcttggcgctattcgttacgttttgtgcaccggga
tacggattgacagcagagaagcccctgcggtcaaacaatgggaaacagacagctgtggac
aagggcctgagggagagctgggagccttctatccatctggatggaagacctgtggaccgc
gtcatcagctccagcaaacccccaaagtctcaccgcttccctaaagtgggaaaggacagt
cgctctcatctactggaggatgtagacccagaatgggttaacctggatggctttgcagtg
ttgggcggtgcacctgtcagcaactcatcagcaggtccagtcaggcctccgcaaattgtt
gccagaaatcagccgtctgtacagcgggccaccagggtggacagaacagctcgtccattg
ggcgtgtctaacaccaggacacataggagagcgcctcagtcctcatcaggtcccaggcag
cctgagagagttttggcagggacaccactactggaaaggagacgccaacaccacaccaag
cctcagtctgaccagagaaaccgacgcgcacaaaaactaacatctgagtccgttcatgtg
gtgtcactgcaggcacagaaatccacggggcagagctcaccgtccaacagagcagttgca
accaaaacaaccacaccagagccaccggtgtatgaggcccgggacatcagtgtcagggtc
atgtctcctcaatcagtcctcatctcctgggttgaccctgctgttgaaatggggaaggtc
gaccctgatgaacccagatcctacacaattagatacagggaaaagggtgagtcagcacgc
tgggagtacaaggacaacaaccagaggagaatgatgatagacaacctgtctgctgacagc
atgtatgagttttctgtcaggatctctcagagagaaaaacaagggaagtggagcgtctcc
gtcttccagaggacccccgagtcagcgccatctgggccaccagaaaactttgaggtcaag
ccactacgcgggaaaggaactgctgtcattgcaacatgggatccacctgaagaacccaat
ggaaggataagagagtacatcctttcatacgcccctgctatgaagccatttggtatgaaa
agtgttactcaccgtggcagcaccacctcagccaccatagatggcctcacaccgggagat
cggtacatcttcaagatcagagctaccaacaggagaggacaaggaccacagagcaaagtc
ttaagtgttgtcatgccaggatccagcagcagtgcctcatcgtcaaaaaccagccgcagg
actagccatactccttccaaacaggataccgaccatgatgaatctgacaacgagccaaca
gaggagccagaagaaccaacaacaccttctcagccacgtcctgctgtcaacaggcgtgta
cggcccctttctcaaacacgctcctatcacagcatcttctctgctgtaaggggttcagtc
aggaatacagggaacagaggaaaagttcaagctagagaagaggaggaagaggaggagaac
atacccacaacaccaccaccagtagaagagacaacaaccatggaggctgtaccagagaca
acagaaccagacaacaatgtttcccccgaagagcccttgactaccgagacccccagcctc
aaagttctgacaccctctccaactaaaccgtctcatcccaaaccaccacctagaagaccc
attaagatcagggtccatcagaaacctaagactggttcctcctcatcatcttctgactcc
tcttcttcttctacttcatcttctggctcctcttcttcctctacttcatcttctggctcc
tcttcttctacttcatcctcctcatcttctggttcctctacatcttcttcatcctcatca
tcctcaccttcttcaacctcattatctccctcctcacgtgttcaagagtcagcagccagt
agaaaagactatgtagcttccacatatccagagagcaaaaacagctacgataagcccagc
ataacacatgcaaaaccctccactgcagttgtaaaagagagcaattcacagcagacagag
cctgtatctatgggtagaggtttgactttagcagcgcgcactaatgggactgggtttggt
tctagatatggttacagtcgaagatatccaggtattttgtctagggggaattcaactcga
atgctcaatggttacaaacctgccattgtctcacagtcgaacttaccaagcagaactcaa
aaccaagcaacatcaaacactcgtacttcagcaacatcacagtctactttaccagacagg
actcaaaaccacagaacatcacaaactttaaattcagcaacatccagatccacttcacaa
agtggaacccataaccaggcaacatcagatccatataattatgacaaatcacaatccaca
tcagagtctaggtctcaaggctctacaactctacagaactcaggcaccaatccatccact
tcacagagcagctcaaaccacccgtcaaacatagacttatcaggctcttctcggtcaact
tcacacagaggatctcatgactctgcaagttcacgcaacacacagagttcacacacatca
cctgagcaggacacagcagtcagagagggaaatgataataggtatcagaaaaatacagat
gcagaagtaaccaaaaatgaagaacctactttaagctctaccccacaacatacagaggag
gagaaaagggaggaagaaggaaaggagaaaagcaataatggaaaaacggtggtttcacgt
acaagaattagcccctcattggttgaaagattcccttggctagctagtcgttacccaggt
aggtttggtacagggacaagagcgtcatctaccaggcaggatagtagaactcccttgacc
aggacttcatcctccattggggctggcacacctatcttaaggggaacacccaccagggtt
tcaggtgccacaggtgctgcaggagtgtccaggatacaggagactagtgaagatctgaga
aacccttccactcttgactcactaaagaatggggtaggggttagttcagttaagccttct
ttgactaataaaaatacagcatccagtgactctagaaacccaactacctcttcatcttca
tcatcttcctctttgaatcgtggacacggagactcaagggagcccatacttagaggaacc
tctaatgacaatgataatgattacaataaggaatctctcaatgagaggagtggagatatc
agtggaaaaaatgataaatttgcagaccccacagctgctcaaaaaaatcctactgtaact
tcaactgaccctcacagaaatgtagaggacaatcaaagtgtggatacttcttctaggaca
agatctggctcaccatctggagtcactccaacacatcgccgtcctggtgcaggagtgaat
gggaggggacgctctcctctgctggctaacaggcagtttggtggatctagaactcctatc
agaccacagccagtacagaactcaagacaaggttcttcaacatctgattcatccctatca
tcacctgatacctcttcttcctcaaagttgccccagccagttttgacctcagatcgtgac
gttggcagtggcactactgtgacaaagacaggaggattaattgggggcaactcccaatct
acatcctcagcatcttcatctccatctagagacagctttaggggtatgggtggtaggcct
cgctatcccatcctcagaggaaagcctattaatggaggacaactcaagcctgtcaatgga
aatggtaaaaatggacgacccaacctgacagcaacaaatgagaaagagtcctcgccctct
caaggaactagcaaggccgttggtcagaggtatatcactggaccagatggaaccaaatgg
gtggtagacttggagcggggagttcttatgaaccaggatggacaagttctccaggactcc
cagggcaaacccaagagagtggtgcttggagaggatggacgcacgattttcgaccgcatg
gggactcccctggtaaacgaggaaggtatggctctgtttggccatggcagagatagccgg
cctgtggtcaaccccaaagacaaggtcctcatggttggaggaaagcctctacttggcttg
gacgtttctcgctccaggaccaccactcccaccaccaccaccaccaccaccaccactacc
atggctcctaccaccacacctgaacccaccacgattgattggtatatagaggactctacc
acaatgctgccgtacccaacctgtccacctggaaccttctccaaaactgatgaatatgga
tatccaatgctggactcagagggaatattggactgttatccagaagaggaatcctcagga
atggaaacggaccacatgcctgatgctttaggtcttgagaaagatgagcttattatccag
accaccctgccacctacaaccaccactaccaccaccaccaccaccacaactacaacaact
gcctccaccaccaccaccacagagatcacgactccacagcgggagaccaagcccttaaac
aaaggcccttcatcagagtttgacctcagcgggaagaagcgatttacagcctcctatgtg
aactacatccggaaggacccaggtgctccttgctccttgacggaggctctggagtatctt
caggtcgacgtcctagaaaacctgatagagaaggacagtctggcagccaatcagcctccc
aaaaacaagcctcataacttcaccgttgttgccatggagggctgccactcatttatcatc
ctggactggggccgaccactgaaggacgacatggtgtcaggctacatggtccacagtgct
tcatatgacgacgtcctcaacaatagatggtcctccagatcctccagcgggacacacctg
cctgtggagaatctcaaaccaaactctaggtactacttcaaagtgcaggccaagaatgtg
tttggtttgggaccagtcagcgatacactcacctatgtcactgaatcagacgatcctctt
ctcatcgaaagaccacctggtggagaaccgatctgggtcccctttaccttcaagtataac
tcggcccacagcagctgtaagggcagccagtacgtcaagcggacgtggtacaggaagttt
gtgggtgtggttttgtgcaactcgctgcgatacaagatcttcatgggagatggtcttaga
gagcccttttacagtataggagatacattcggccagggagaggaccactgccagtttgtg
gactcatacatggacgggaggacaggcccggcctacctctcaaataatctgcccacagca
caaggattttatcgcgcgtacagacaggagccagtcacatttggagtcattggcagacgt
acatcccatccattcgtgggctggtatgaatgcggagtgccaatccccggcaagtggtaa
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integrated database retrieval system
