Larimichthys crocea (large yellow croaker): 104922563
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Entry
104922563 CDS
T04659
Symbol
gen1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104922563 (gen1)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104922563 (gen1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
104922563
NCBI-ProteinID:
XP_019129562
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All DBs
Position
XI:8898156..8906801
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AA seq
923 aa
AA seq
DB search
MGVHDLWSIVEPVRESVPLYSLSGKTLAVDLSLWVCEAQHVQAMMGRVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKLKAETMSKRTEARYGGFKKAAAPKSAANTSRGRFKAVLRE
CADMLDYLGVPWVTAAGEAEAMCAYLDSQGLVDGCITNDGDAFLYGARTVYRNFNMNSKD
PQVDCYRTSRVQTELQLSRENLVGLAIFLGCDYIPKGIPGVGREQALRLIQTLKGQTLLQ
RFIQWKVENAGVLEGVVKKVAHCNVCRHPGSAKAHERGGCVLCDSKRFCQPQDFDYQCPC
DWHRYEQTRQAMSFEANIRKKTLASQQFPFTEIINEFLISKDKPVSHFKSRQPNMLLMQK
FASDKMEWPKHYTSEKLLVLMTYTELMNRKYGREMSSQIKPLRILKPRVRNAIACFEIIW
STPEHYVFPEDRPAEDQHEVRTVEEESLVRVAYPEMVESYLRDKALAEENKTKKRKPKSK
KEKPCEISDGISDLLAQMTLQSSSNTQQQTLLPTISTTEKLEVVVLDTPVNHKQCESKED
NSSAGDCPSTPLSRAESEATASPSVSVVIEALHLSDIDWDALSFTSSPTPQSAANHTAEP
KTTDSEAKEKEGTTTKRKTSSDVKETDPRSAPEFTECPLRDRVLMRNTAKAMNQMEIRND
AVSKQLTYEFKHTSSHNSNSKPTSQIPRLSSTDTKLSGNESAVNKKEPLADKRQHATNKT
ETETRCSKQQLRPQSKTKDKCNGSQKPPQKYKFVRTAISSSAAPPQRYHSDPGQSNKDKK
LPQTTKKSVCMIIGSSSEESDTENQQSRPQRKTQIKSVNKNKASSLSDVPLKPVSGSKTT
KPTAHNVQSLRLKPQSRSVNTEIKSIPVSTKSTHRDVSPANVDDVFLQTPASPAAVLDSD
DSVICSESPLPLAERLRLKFLKS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcacgatttgtggtctatcgtggagccggttcgtgagtcggtgccgctgtac
agtctgagcggaaagacgctggctgttgatctgagtttatgggtatgcgaggcccagcac
gtccaagcaatgatggggagagttaccaaaccccacctgaggaatctgtttttcagggtg
tcatccctcaccctcatgggggtgaagctcgtctttgtgatggaaggagaagcccctaaa
cttaaagcagaaaccatgagcaagaggacagaggcaagatatggaggattcaaaaaggca
gctgctccaaagtctgcagcaaacaccagcagagggcgctttaaagctgtgctgagagag
tgtgcagacatgttggactatctgggtgtgccgtgggtgactgcagccggggaggctgag
gccatgtgtgcctacctggactcacagggcctggtggacggctgcatcactaatgatgga
gacgcattcctgtatggagcccggacggtctacaggaacttcaacatgaacagtaaagac
cctcaggtggactgttacaggacctccagggtacaaacagagttacagctctccagagag
aatcttgtcggtctggccatctttcttggctgtgattatattcctaagggcataccaggc
gttggtagagagcaagctctgaggcttatacagacgctgaaaggacaaacacttctgcag
aggttcatccagtggaaggtggagaatgcaggcgtgcttgagggagtggtgaagaaggtt
gctcactgcaacgtatgtcgacatcctggctcagcgaaggcacatgagcgcggtggctgt
gtgctttgtgacagtaaacgtttctgtcagcctcaggacttcgactaccagtgtccctgt
gactggcaccgctatgaacagacgcgccaggccatgtcttttgaggctaacatcaggaaa
aaaacactggcaagccaacagttcccctttacagagatcattaatgagttcctgatttcg
aaggataagcctgtgtcacatttcaagagcaggcaaccaaacatgctgttgatgcagaaa
tttgcctctgataagatggagtggccgaagcactacacgagtgaaaagcttttagtcttg
atgacctacacagagctgatgaacagaaaatatggaagagagatgtcctctcaaatcaag
cccctcagaatattgaaaccaagggtgaggaacgccatcgcttgctttgaaatcatctgg
agcacaccagaacattatgtgtttcctgaggatcggcctgcagaggatcaacatgaggtg
aggactgtggaggaagagtctctcgtccgtgtggcctacccagagatggtggagagctac
ctgagagacaaagctctggctgaagagaacaagaccaagaagaggaaaccaaagagtaaa
aaggagaagccatgtgaaatctctgatggcatttcagacctcttggcccagatgaccctt
cagagttcctctaacactcagcagcagactcttctccctactatttcaaccacagagaaa
ctggaagtagtggttttggacactccagtgaaccataaacagtgcgagtcaaaagaggac
aacagcagtgctggtgattgcccgagtactcctctgtctcgtgcagaatcagaggctact
gcttcaccttctgtctctgttgtcatcgaggctctacacctgagtgacatcgactgggat
gctttgtccttcacatcctctccaactccacagtcagctgcaaaccacaccgctgagccc
aaaaccacagacagtgaggcaaaggaaaaagagggcacaaccaccaagcggaaaacctca
agcgacgtcaaagaaacagaccccagatctgctccagagttcacagagtgccctctaaga
gacagagtgctcatgaggaacacggctaaagctatgaaccagatggagatacgcaatgac
gcagtctcaaaacaactaacctatgagttcaaacacacttcttctcataactcaaactca
aaaccaactagtcagatccccaggttaagtagcactgacactaaactgtcaggaaatgaa
tctgctgttaacaaaaaagaaccgctcgctgacaaaaggcagcatgcaacaaataaaaca
gaaacagaaacccgctgttcaaaacagcagctgaggcctcagagtaagacaaaggacaaa
tgtaatggctcccaaaagcctcctcagaaatataaatttgtcagaacagccatttcatcg
tcagctgccccaccacagaggtaccactccgacccaggtcaaagcaataaggacaaaaaa
ctgccgcagaccaccaagaagagtgtgtgtatgatcataggttcatccagcgaggaaagc
gacacagagaaccagcagtcccgacctcaaagaaaaactcaaatcaagtccgtaaacaag
aacaaggccagctccctttcagacgtcccactgaaacctgtttctggatctaaaacgacc
aaaccgacagctcataatgttcagtcattacgactaaaacctcagagccgcagtgtaaat
acggagataaaaagcatacctgtatcaactaaaagcacacaccgggacgtctcaccagct
aatgtggacgacgtgttccttcagactccagcatcacctgccgctgtgttagatagtgac
gattcagtcatttgtagcgagagtccactgccactggcagagagactgagattgaagttc
ctgaagtcatga
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