Larimichthys crocea (large yellow croaker): 104922639
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Entry
104922639 CDS
T04659
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104922639 (ssrp1)
03036 Chromosome and associated proteins [BR:
lco03036
]
104922639 (ssrp1)
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
104922639 (ssrp1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
104922639 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
104922639
NCBI-ProteinID:
XP_019129965
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Position
I:complement(29872032..29884325)
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AA seq
709 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNQAQWRRVCLGH
GIKLGTSSGHIYKYDGFRDTDFEKISEFFKANYKMELTEKDMCVKGWNWGTAKFSGPLLS
FDVNDNAAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQSDERQDPVE
AFAQSVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDEDQHDAYLERMKAEGKIREEGNDSDESDGESD
ESFNPGEEDDDIAEEYDSNASASDSSDDGDDSEDDSAKKKKKAKKAKVVKEKKERKPRKE
KKQKDTGGPKRPMSAYMLWLNASRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWDT
KAGEAKRQYDKAKKEYKESGGGSASSSKKESKKSGGKKEEKKRKSAGGDKDKDRGGGGND
SFKSREFIETSEESSSDSDHKSKSKRKKQKSEEEEEAVSTPASSEEESD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcaacgagatttaccaggaggtcaaaggctcctggaatgac
gggcggctgcgtttcagcaagcagaatgtggtttataagagcagcaagacggggaaagtg
gacagcatcccagctggtgaactcaaccaggcccagtggagacgagtgtgtttaggtcac
ggcatcaagctgggcacaagctcaggacacatctacaaatatgacggcttcagggacaca
gactttgagaagatctcagagtttttcaaggctaactacaagatggagctgacggagaag
gacatgtgtgtgaagggatggaactggggaacagcaaagttctcagggccgttgttatca
tttgatgtaaatgacaatgctgcgttcgagatcccgctgtccaacgtgtcccagtgcgcc
acggggaagaacgaagtcaccctggagtttcaccagaacgatgacaccgaggtctccctc
atggaggtccgattctacgtcccgcccagccaatccgatgaacggcaagaccccgtcgag
gcgtttgcccagagtgtgttgtctaaggctgatgtgatccaggccacaggagacgctgtg
tgtatcttcaaagagctgcagtgtcttacacccagaggaagatatgacatccgtatttac
ccgactttccttcacctccacggtaagacctttgactacaagattccctacaccaccgtc
ctccgtctattcctgctgccacacaaggatcagaggcagatgttcttcgtgatcagtctg
gatcctcccatcaagcagggtcagacgcgttatcacttcctcattctgctcttctccaaa
gaagaggacatcagcctcaccctcaacatgagcgaggaggacgtggagcgccggtttgag
ggcaagctcagtaaaaacatgtcagggtctctgtatgagatggtcagcagggtgatgaag
gctctggtcaaccgcaagatcaccgtgcctggaaacttccagggtcactctggcgctcag
tgcatcacctgctcctacaaggcgtcctcaggcctcctctaccctctggagagaggcttc
atctacgtccacaagccccccgtgcaccttcgcttcgaggaaatctcctgtgtcaacttc
gccagaggcaccaccacgacccgatcctttgactttgagatcgagaccaagcagggaaat
cagtacaccttcagcagcatcgagagggaggagtacggcaagctgtttgactttgtcaac
gccaagaagctcaacatcaagaacagagggttcaaagagaagaagggcatgaagggtaaa
attgacgagtacagtgactcagacgaggaccagcacgacgcctacctggagaggatgaag
gctgagggcaaaatcagagaggagggtaacgacagtgacgaatctgacggcgaaagtgat
gagtcttttaaccctggagaagaagatgacgacattgcagaagagtacgacagcaatgct
tcagcaagcgacagcagtgacgacggggatgatagtgaagatgacagcgcaaagaagaag
aagaaggccaagaaagccaaagtggtgaaggagaaaaaagaaaggaaaccacgtaaagag
aagaagcagaaagataccggcggccccaagaggccgatgagtgcctacatgctgtggctc
aacgccagtcgcgagcgaatcaagtcagagaatccaggcatctccatcacagagatttca
aagaaggccggagagatgtggagacaactgggcaaagacgagaaggaggagtgggacaca
aaggcaggagaggccaagaggcagtacgacaaagcaaagaaggagtacaaagagagcggc
ggaggatcagcctccagttccaagaaggagagtaaaaaatctggagggaaaaaggaggag
aagaaaaggaagtctgcagggggagataaggacaaggaccggggaggcggaggcaacgac
agcttcaagagtcgagagttcatcgagaccagcgaggagagttcatcagactccgaccac
aagagcaagtccaagaggaagaagcagaaatcagaagaagaggaagaggccgtgtccaca
cctgccagctcagaggaagagtctgactaa
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