Larimichthys crocea (large yellow croaker): 104922758
Help
Entry
104922758 CDS
T04659
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lco03009
]
104922758 (ddx10)
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104922758 (ddx10)
Ribosome biogenesis [BR:
lco03009
]
Eukaryotic type
90S particles
Helicases
104922758 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
104922758
NCBI-ProteinID:
XP_027146249
LinkDB
All DBs
Position
XVII:25646120..25651760
Genome browser
AA seq
848 aa
AA seq
DB search
MEKKGSSSFGKKPKPAKMKDGADPVKNFEKWKKKYNKTKTRVKRERAQKKKPEWQVEREY
IDRLVSRYGDISNKDVVKFSDFPISKKTLLGLQEAQYRQPTEIQRQTVGFALQGKDVLGA
AKTGSGKTLAFLIPVLECLFRQQWTSMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSA
GLIIGGKDLKSESERIQHTNIVICTPGRLLQHMDETATFHASNLHMLVLDEADRILDMGF
ADTLNAIVENLPKTRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQNY
VVCELHQKVNMLFSFIRSHLKKKIIVFFACCKEVQYLFRVFCRLRPGMPILALHGKQQQM
KRVEVYNDFLKKNNAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEG
GEALLLLLPSEEKGMTSQLQEKKVPINKIQVNAEKLQNVQQKLEAFLAQEKEQKERAQRC
FVSYLRSVYLMKNKEVFDVFKLQLHEYALSLGLAVAPRVRFLNKAQAQRAEKGGQREEEE
EESEEEEDLKSFKAQLRGKVPHKESQSSESEDSGDDEESGDEKEADQSKALLLGVDGDSE
DDDDLKDLELLTVKRKDVFNLTGGQETEEEDSDTDSKKKTVKETKFKEAKKALKRNFQLN
TKVTFSEEGQAVQLWPPVQKSATAEEEDEEEEVSGINVEKAKERLRREDQEFDKQEYRRK
VKAKHKEQKLKAKAARREASKQQGKNSDEEEEDDVVAYLANHSEDEFDPSTLPDPDKPRS
EDEEEEDEEDQIKSAKRQYSSESSDEEELTVAKKKRVRQQEEEGAVLDTGLSLAEDEELV
LHLLGGRR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaggctcgagctccttcgggaagaagcccaagcccgcgaagatgaaagat
ggcgccgaccccgtgaaaaacttcgagaagtggaagaaaaaatacaacaagacgaaaaca
cgcgtgaagagggagagggcgcagaagaagaagcccgagtggcaggtggagcgggagtac
atcgacaggctggtcagcaggtacggcgacatcagcaacaaggacgtggtcaagttctca
gacttccccatctcgaagaagaccctgctgggcctgcaggaggctcagtaccggcagccc
accgagatccagaggcagaccgtcggcttcgctctgcaggggaaagacgtcctcggcgcg
gctaagaccggctctgggaagacgttagccttcctcataccggtgctggagtgtctgttc
cgccagcagtggacctccatggacggcctcggtgctctcatcatatcccccaccagagag
ctcgcctatcagaccttcgaagtcctccgcaaggtgggcaagaaccacgagttctctgcg
gggctcatcatcggcggcaaagacctcaagagcgagtcggagaggatccagcacaccaac
atcgtcatctgcaccccgggccggctgctccagcacatggacgagacggccaccttccac
gcctccaacctccacatgctggtcctggatgaggcggaccgcatcctggacatgggcttc
gctgatacgctcaacgccatcgtggagaacctcccaaagaccaggcagacgctgctgttc
tccgccacgcagaccaagtcggtcaaagacctggcccggctcagcctcaaagacccggag
tacgtgtgggttcacgagaaggccaagttcagcaccccggccacgctggagcagaactac
gtggtgtgtgagctccatcagaaggtcaacatgctcttctcgttcatcaggagccacctg
aagaagaagatcatcgtcttctttgcctgctgcaaggaggtgcagtacctgttccgggtc
ttctgccgcctcagacccgggatgcccattctggctctgcacggcaaacagcagcagatg
aagagagtggaggtctacaacgacttcctcaagaagaacaacgccgtgctcttcgccacc
gacatagccgccagaggcctggacttccccgccgtcaactgggtgctgcagttcgactgt
ccggaggacgcagacacctacatccacagggtgggccgcaccgccaggtacaaggagggc
ggagaggccctgctgctgctgctgccctcagaagagaaaggcatgaccagccagctgcag
gagaagaaggtccccatcaataagatccaggtgaatgcagagaagctgcagaacgtccag
cagaagctggaggccttcctggctcaggagaaggagcagaaggagagagctcagaggtgt
tttgtttcctacctgcgctccgtctacctgatgaagaacaaagaggtgtttgatgtcttt
aaacttcagctccacgagtacgcgctctctctgggcctcgctgtggctccgagggtgcgc
ttcttgaacaaagcccaggcccagagagctgagaaaggaggacagagggaggaagaggag
gaggagtctgaagaagaggaagatctgaaaagctttaaggcccagctgagaggaaaagtt
cctcacaaggaaagccagagctccgagtcagaagattcaggcgacgacgaggaaagcggt
gatgaaaaagaggcggatcagtccaaggctctgctcctgggtgtggatggcgacagcgaa
gacgatgacgatttaaaagatctggagctgctgacagtcaaaagaaaggacgtctttaac
ctgacggggggtcaggagacggaggaggaagactctgacacggattccaaaaagaaaact
gtaaaagagacaaagttcaaagaagccaaaaaggccctcaagagaaacttccagctcaac
accaaagtgactttcagtgaagaaggacaggccgtgcagctgtggccgcccgtccaaaag
tctgcgactgcggaagaggaagacgaggaagaggaggtttcgggtatcaacgtggagaag
gccaaggagaggctgagacgcgaggaccaggagttcgacaagcaggagtacaggcgcaaa
gtgaaggccaaacacaaggagcagaagctgaaggccaaggcagccaggagggaggccagc
aagcagcaaggaaagaactctgacgaggaagaggaggacgacgtggtggcttacctggcc
aatcacagcgaagacgaattcgaccccagcaccctgccagaccctgacaaaccgcgatct
gaggacgaggaggaggaggacgaggaggatcagataaagtcagctaaacggcagtacagc
agtgaaagcagcgacgaggaagagctcacggtagcgaagaagaagagagttaggcagcag
gaggaagagggcgctgtgttggacaccggactgtctctggctgaagacgaggagttagtc
ttacatttgctgggaggacggaggtag
DBGET
integrated database retrieval system
