Larimichthys crocea (large yellow croaker): 104922770
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Entry
104922770 CDS
T04659
Name
(RefSeq) iroquois-class homeodomain protein irx-1-A-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104922770
Transcription factors [BR:
lco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
104922770
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
104922770
NCBI-ProteinID:
XP_010733998
UniProt:
A0A6G0HSP5
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Position
XIII:2531687..2535532
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AA seq
460 aa
AA seq
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MSFPQLGYPQFLSASHEVYGGERPASAREGGTEGGVSSSATAAAVGSMLGMYGSPWAAHN
YSAFLPYSGATDLALISQMGSQYELKDSPGSHTASLPVHAAQGFYPYGQYPYGDPSRAKT
ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTW
GRSAEDRDGRIFSSDNEDDHGKNGSDDEDEEEEIDLETVDIERPEEQRAVEQGSAKGEGE
AELAAREQASEPKSSDSSRTLSVEGLRGVEAALSLNRSPVVKLAVDHSPSRQECQRPQQS
KPKIWSLAETATAPDSSHKPSPAAHAHHPTLASAGHPALLPGHGIYTCQIGKLHNWANAA
FLNANSLLNMRSLLGGAPAGHLPLHGAVPVARHDALQAAAGPGTSGTEDDSDVESSGSFS
PKRDDEESDHRPDSLKSPFQLITDRPHHGTAPQRVLTTTS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctggggtacccccagttcctcagtgcctcccatgaggtatacggg
ggcgagcggccggcctctgcccgggaaggaggcaccgagggcggcgtgagctcgtccgct
accgccgcggctgtcggctccatgctggggatgtacgggagcccatgggcggctcataac
tacagtgcctttctgccgtacagcggagctacagacctcgccctcatatcccagatgggc
tcccagtatgagctaaaggacagcccggggtcccacacagcctctctacctgtccacgcc
gcccaaggcttctatccgtacggccagtatccatacggtgatccatcgagggccaagacg
gccactcgtgagaccacaagcaccctgaaggcctggctacaggaacaccagaagaacccc
tacccaacaaaaggagagaagataatgctggctatcatcacccggatgacactcacacag
gtgtcgacgtggttcgcgaacgcccgcagacgcctgaagaaggagaacaaggtaacgtgg
ggccgcagcgccgaggaccgggacggccgcatcttcagcagtgacaacgaggacgatcac
ggcaagaacggcagcgacgatgaagacgaagaggaggaaattgatttggaaactgtcgat
atcgagagacccgaggagcagcgagcagtagagcagggctccgcgaagggagaaggagag
gcagagctggccgccagagagcaggcctcagagccgaagagctcggacagcagcaggacg
ctttctgtagagggcctgagaggagtggaggcggctctttctctcaatagatcgcctgtt
gtcaaactcgcagtggatcattctccaagcagacaggagtgccagagaccgcagcagagc
aaacccaaaatctggtctctggctgagaccgccacggcccccgacagttcacacaaacct
tcccccgcggcccatgctcaccacccgactttggcctccgccggccacccggcattactc
ccgggtcatgggatatatacgtgccagattggcaagctgcacaactgggccaacgcggct
tttctgaatgccaactctcttttgaacatgaggtcgctcctcggaggagccccggccgga
cacctgcctctccacggcgcagtgccggttgcgcgtcatgacgcactacaggcggctgca
ggtcccggaacctcgggcacggaagatgacagtgatgtagaatcatcgggaagcttcagt
ccaaaaagagatgacgaagagagcgaccacaggcctgactccctgaagtcaccattccag
ctgatcactgacagacctcaccatgggacagcaccacagcgggttctgacaacgacatca
tga
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