Larimichthys crocea (large yellow croaker): 104922794
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Entry
104922794 CDS
T04659
Symbol
snx1
Name
(RefSeq) sorting nexin-1
KO
K17917
sorting nexin-1/2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104922794 (snx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104922794 (snx1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104922794 (snx1)
Membrane trafficking [BR:
lco04131
]
Endocytosis
Macropinocytosis
Sorting nexins
104922794 (snx1)
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
104922794 (snx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
Phage_T7_Gp13
Motif
Other DBs
NCBI-GeneID:
104922794
NCBI-ProteinID:
XP_010734028
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Position
VIII:3801010..3808465
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AA seq
527 aa
AA seq
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MAAISDRLAPFPAAEEPGAGAPDTADGDSDEGEDIFVCKSNPVAAVSRGVSQPEPPDLFS
EEDDEEEEEEAGANTPAKSNGVHSDDDNDLFAEAHVELSTDKPGNSDRKELSTSSSGLRP
ASSFTQSHAAMQPTSLEQLEDEEAKDSFDVDVAVTNPEKVGDGMNAYVAYKVSTRTSLPM
FRSKAFTVRRRYSDFLGLYEKLSVKQSLQGCIIPPPPEKSVVGMTKVKVGMDDPSSVEFV
ERRRAALERYLQRVVCHPSLLQDPDVREFLEREELPRAVSTQTLSGAGFLKMINRASDAV
NKMTIKMNESDTWFEDKFQEVENEEQQLRKLHALVDSLVNHRKELCGNTAVFAKSMAMLG
NSEDNTALSRALSQLAEVEDKMEQLHQEQAASDFFIFEELLADYIRLLGAMRGCFDQRIR
AWQRWQEAQGTLQKKREAEAKLLWANKPDKLQQAKDEITEWESRVTQYEREFDRVGMTVR
KEVLRFEKEKAKDFKSQIIKYLEAMLQSQQRLIKFWEAFLPEAKAIA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatctcggatcgtctcgctcctttccccgcagctgaggagcccggagccgga
gcgcccgacacggcagacggagacagcgacgagggggaggacatcttcgtctgtaagagt
aaccctgtggctgctgtgagtcgaggagtttctcagccggagcctccagatctcttcagt
gaggaggatgatgaggaggaagaggaggaggccggtgccaacacacctgccaaatccaac
ggggttcactctgatgatgacaacgacctgtttgctgaggcgcacgtggagctgagcaca
gacaagcccggcaactctgatcggaaggagctctccacctcctcctctggcctccgtcct
gcctcctcgttcactcagagccatgcagccatgcagcccacctccttagagcagctggag
gacgaagaagccaaggatagttttgatgtggatgtcgccgtcaccaaccctgagaaagtc
ggagacggcatgaatgcatatgtggcctacaaagtgtccaccaggacgtccttgcccatg
ttcaggagtaaagccttcactgtgaggaggcgttatagtgacttcctgggtctttatgag
aagctgtccgtcaagcagtcgctccaaggctgcatcatcccaccaccgcctgagaaaagc
gtcgtaggaatgacaaaagtgaaagtgggaatggacgacccgtcttcggtagagtttgta
gagagaagaagagcggctctggagaggtatcttcagagggtagtgtgtcacccgtcgtta
ctacaagatcccgatgtccgtgagttcttggagagagaagaattacccagagcagtgagc
acccagacactgagcggagctggcttcctcaaaatgatcaatagggcatcagatgctgtc
aacaagatgaccatcaagatgaatgagtctgacacttggtttgaggacaagttccaggag
gtggagaacgaggagcagcagctgaggaagctacacgctttggtcgactccctggtcaat
cacaggaaggagctgtgtgggaacacggcagtatttgccaaaagtatggccatgttggga
aactctgaggacaacacggccctgtcccgggctttatcccagctggcagaggtggaggac
aagatggagcagctgcatcaggagcaggcagccagtgacttcttcatctttgaggagctg
ctggctgactatatccgcctactaggtgctatgcgggggtgttttgaccagcgtatccgg
gcgtggcagcgatggcaggaggctcagggcacgctccagaagaagagggaggccgaggcc
aagctgctgtgggccaacaagcccgacaaactgcagcaggccaaagacgagatcactgag
tgggagtcgagggttactcagtacgagagagaattcgacagggtcggaatgactgtacgt
aaggaggttctcaggtttgagaaagaaaaagccaaggacttcaagagccagataatcaaa
tatttggaagcaatgctgcagtctcaacaacggcttataaagttttgggaggcgttcctg
cctgaggcaaaggcgatagcttaa
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