KEGG   Larimichthys crocea (large yellow croaker): 104922838
Entry
104922838         CDS       T04659                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03050  Proteasome
lco03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    104922838 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    104922838 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lco03019]
    104922838 (sem1)
   04131 Membrane trafficking [BR:lco04131]
    104922838 (sem1)
   03051 Proteasome [BR:lco03051]
    104922838 (sem1)
   03400 DNA repair and recombination proteins [BR:lco03400]
    104922838 (sem1)
Messenger RNA biogenesis [BR:lco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     104922838 (sem1)
Membrane trafficking [BR:lco04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    104922838 (sem1)
Proteasome [BR:lco03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     104922838 (sem1)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     104922838 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 104922838
NCBI-ProteinID: XP_010734078
LinkDB
Position
XIII:47580419..47583815
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagacaagaaacagaccgtggacctgggtctactggaggaggatgatgagtttgaa
gaattcccagccgaggactggacggggctggatgaggacgaagatgctcatgtttgggaa
gacaactgggacgatgacaacgtagaggatgatttctcaaatcagctcagagctgagctg
gaaaaacatggctacaagatggagacgtcataa

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