KEGG   Larimichthys crocea (large yellow croaker): 104922870
Entry
104922870         CDS       T04659                                 
Name
(RefSeq) ras-related protein Rab-33B
  KO
K07920  Ras-related protein Rab-33B
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104922870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lco04131]
    104922870
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lco04147]
    104922870
   04031 GTP-binding proteins [BR:lco04031]
    104922870
Membrane trafficking [BR:lco04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab GTPases
    104922870
 Others
  Specific organelles associated proteins
   Auto phagosome
    104922870
Exosome [BR:lco04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   104922870
GTP-binding proteins [BR:lco04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab33
    104922870
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 SRPRB PduV-EutP GTP_EFTU G-alpha RsgA_GTPase AAA_16 NACHT AAA_24 AAA_22 AAA_7 Sigma54_activat AAA nSTAND3 AAA_33 AAA_18 AAA_5 Septin ATP-synt_ab TniB
Other DBs
NCBI-GeneID: 104922870
NCBI-ProteinID: XP_010734125
LinkDB
Position
X:37350503..37353314
AA seq 242 aa
MESSLEFSSSLGSMSSLLTRCRTFKVLVIGDSGVGKTCLAHRLSAGEFPMRVEATIGVDF
RERVLDIDGERIKLQLWDTAGQERFRKSMVQHYYRNVHAVLFIYDVTCPASFRSLTSWIE
ECRQNSIGREIPRFLIGNKSDLRNACRTDGQVNQEWAMSFAKAHGMMFFETSAKDPPKTR
ASTRLSDGEVPHQQNEVEDIVVAVGAKLKRQKKPSVTSLPTYSGSFKLPNKKRPEKEVWT
CC
NT seq 729 nt   +upstreamnt  +downstreamnt
atggagtcatctcttgagttttccagctctttgggcagcatgtcttctctgctgactcgc
tgtcggacctttaaagtgctggtgattggagactccggggtggggaagacctgcctcgca
caccgactttccgccggagagttccccatgagagtggaggctaccatcggcgtggacttc
cgcgagagagtgctagatatagatggagagaggattaagctccagctgtgggacacggcg
ggacaggagcgtttccggaagtccatggtgcaacactactatcgtaacgtccacgctgtc
ctctttatatatgatgtcacctgtcctgccagcttcaggagcctgacttcctggatagaa
gagtgcaggcagaactctatcggaagggagatccccaggttcttgattgggaataagagt
gacctgcgtaatgcctgcaggaccgatggacaagtgaaccaggagtgggcgatgagcttc
gccaaagcccatggcatgatgtttttcgagacgtctgccaaggacccgccaaaaacacga
gcgagcactcgactgagtgatggggaggtgccgcatcagcagaacgaggtggaggacatc
gttgttgctgttggagccaaactgaagagacagaagaaaccttcagtgacaagccttccg
acgtacagcgggtcattcaaactcccaaacaagaaaagacctgagaaagaggtgtggacc
tgctgctga

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