Larimichthys crocea (large yellow croaker): 104922897
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Entry
104922897 CDS
T04659
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X2
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104922897
04020 Calcium signaling pathway
104922897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104922897
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104922897
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104922897
NCBI-ProteinID:
XP_019128391
LinkDB
All DBs
Position
IV:complement(4336900..4471736)
Genome browser
AA seq
2408 aa
AA seq
DB search
MARFAEDLPTRYGGGAGGGGRGGPGAGRGGARGGGAPGGQRVYKQSMAQRARTMAIYNPN
PVKQNCFTVNRSLFIFREDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPADD
KTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILAKV
GSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGV
EFYMGKFHSTCFKMDTGEKAEDWPCGQELPARTCPNGTVCREYWTGPNFGITNFDNILFA
VLTVFQCITMEGWVEILYNTNDVAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKER
ERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKSPLDGAWYKRKQN
LPVLKRSKAKKGKNDLISAEEGEDPFADISSVAPPGSPFGRASVKSSNKLDSSSYFRRKE
KRTRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPDWLTKALYTAEFVFLGLFLTE
MTLKMYGLGARNYFHSSFNCFDFGVIVGSICEVIWDMIKPGASFGISVLRALRLLRIFKV
TKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGHFNFDHQTPTTNFDT
FPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMPFSIYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPMSAANISIAAFVKQNRDALSRR
SSINSIQSLKEQQRSSKAMSVWEQRTNQLRRHNMRASSEALFNELDPEERLRVSSALHLH
PDMKTHLDRPLVVEARDGDKPSRPAEGGREEAGDPQQDGDNFHPQSRKHHRHRDKNGESR
DGGEGRGGRHHTHGSRSREHNTDGAQTKERRGDRSHSRDGGQGHRHHHHTGSPEDEANDV
RGRGEERGHRHHHSHRAQKEENGMIANGAQGERKGKGGGGMDSNGERKGRCSRMVRAQST
LDGDDCKRNKNGTKGHWERQPDAEVDGLASSPLQAMQSSLSLGEKQEDADNQKNSTRASQ
AGLNSNAIHIPVTITAPPGETTIIPMNNIDNFQLNEEKKDLEEAAAANGPRQILPYSSMF
IFGQTNPVRRLCHYVVNLRYFEMCILMVITMSSIALAAEDPVQANAPRNNVLKYLDYVFT
GVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSSLMGSQQSVARGTK
GKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIA
VQLFKGKFFYCTDESKGLEKDCRGHFLDYGRDDVAAQPREWKKYEFHYDNVLWAFLTLFT
VSTGEGWPVVLKHSVDATYEDRGPNPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQ
EQGDKAMSECSLEKNERACIDFAINAKPLTRYMPENKQSFQYKMWKFVVSPPFEYAIMTL
IALNTVVLMMKFYDAPVLYESMLKYLNIVFTALFTLECVLKIIAFGPLNYLKAAWNVFDF
VTVLGSITDILVTEIKTDKMINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPY
VCLLIAMLFFIYAIIGMQVFGNIELNEDTEINHHNNFQTFFQALTLLFRSATGESWHEIM
LGCLSNRPCDKLSGTVGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDAS
ILGPHHLDEFIRVWAEYDPAACGRMTYLDMYKMLRDMSPPLGLGKKCPPRVAYKRLVKMN
MPIADDNTVHFTSTLMALIRTALEIKLASGVLAQHLCDVDLKREINRVWPNLSQKTVNLL
VTPPKYNELTVGKVYAALMIFDYYKQNRAKRLQQQQSSGGPQSKLSALFRPVLPLTHILE
VEPPFPSPKQPLPPKPGPEPKPEAPPTTITTTATTATSVNRDTILNHRSAIKHSQSGDVS
QAAQRPKGRRKLQRGQSEDVPYSTRPQELVELKQVENISDTEGYPSQEGHCRAASLPRLN
AEYYRSHPRHAPGTHLAPIVDLSPIKRSASSLTQQHHQEAGLREYNLERPNLAQSSTGPG
QVQGQDRAHHHHHHHRCHRRRDKDKDKKQKSLDRATSVQPSSTVGSFTDPSAEGMSRERA
RERDRSRPHERRHHSSAGEKQRYYSCERYGSREQCHTKSAGPSRSTSPGEGQDAGLLKQH
GSSVVKGGLVMLPSGSSTPGRSRRQLPQTPLTPRPAVAYKTANSSPLPSGASTTMTGHQT
HFRRGLSEHDRLFGGLDESPMPITRIGSDPNLNRQSQVTSQQALLEDTEDFHDTVSSHGE
GLSARTTASSTASASHGTAAAPVSVPATHSRAGVVPNGYHFTVGVNSASGPGSRDTGRLR
ERDEEDWC
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgcagaagatctacccacccgctatggaggaggcgcaggcggcggaggg
agaggcggaccgggcgccgggagagggggagcccggggtggcggcgctccgggtggccag
cgggtgtacaagcagtcgatggcccagagagcccggacaatggccatttacaacccgaac
cctgtcaaacaaaactgcttcactgtcaaccgctccctcttcatcttccgcgaggacaat
gtcatcaggaagtacgcaaagcgaataaccgagtggcctccatttgagtacatgatcctt
gctacaattattgccaactgcatcgtcttggccctggagcagcacctaccggccgatgac
aagacgcccatgtcagaacgtctggacgacacagagccctactttattggaatattctgt
ttcgaggctgccattaagatcatcgccctgggctttgcatttcacaaaggctcctacctc
cgcaacggctggaatgtaatggacttcgtggtcgtcctcacaggaatcctggccaaggtg
ggttcggagtttgacctgcgaacactgcgggcggtgagagtgctgaggcctctaaaactt
gtgtcaggaatccccagtctccaggtggtgttgaagtccataatgaaagccatggttcct
ctgcttcagattggcctgctgctcttcttcgccattgtcatgtttgccatcatcggagtg
gagttctacatgggcaaattccacagcacctgcttcaagatggacactggtgagaaagca
gaggactggccttgtggtcaggagctcccagccaggacgtgtcccaatggcaccgtatgc
agagagtactggactggacccaactttggtattaccaattttgacaacatcctgtttgcg
gtgcttactgtgttccagtgcatcaccatggagggctgggtggagatcctctacaatacc
aatgatgtagcagggaacacctggaactggctctacttcattccgctcatcatcatcggc
tccttcttcatgctcaacctggtgctgggtgtcctatctggagaatttgccaaggagaga
gagcgtgtagagaagagacaggagttcctgaagcttcggaggcagcagcagatagagaga
gagctcaccggatacttggagtggatctgcaaagcagaggaggtgttgctggaggaggag
gatgagattgcagaggagaagtccccgctggatggtgcgtggtacaagaggaaacaaaac
cttccagtcttgaaaagaagcaaagccaagaaaggtaaaaatgacctgatcagtgcagag
gagggggaggatcctttcgcagacatctcctctgttgctcctccgggctctccctttggt
cgggccagtgtgaaaagcagcaataagttggacagctcctcctacttccggcgtaaagag
aagaggacacgattcttcatccgccgcatggtgaaagctcagagcttctactggatcgtt
ctgtgtttggtgggcctcaacactctgtgtgtggccatagttcactacgaccagcccgat
tggcttacaaaggccctctacacagcagagtttgtgtttctgggtttgtttctgactgag
atgaccttgaagatgtacggcctcggagcaaggaattatttccattcctcgttcaactgc
tttgactttggggtgattgtgggaagtatttgtgaggtgatctgggacatgattaaacca
ggagcatcgtttggtatcagtgtgttgagagccctgcgactgctcaggatattcaaagtc
accaaatattggaactcgttgaggaacctagtggtctcgctcctcaattccatgaagtcc
atcatcagcttgctcttcctcctcttcctcttcatcgtggtcttcgctctgcttggcatg
cagctcttcggaggacactttaactttgaccatcaaacgccaacaacaaactttgatacc
ttcccagcagccatcctcacggtgttccagattctgacgggtgaggactggaatgctgtc
atgtaccatgggattgaatctcaaggaggtgttcgccgcggcatgcccttctccatctac
ttcatcgtcctcacactctttggaaactacaccctcctaaatgtcttcttggctatcgct
gtcgataacctcgcaaatgcacaggagttgactaaggatgaagaggagcaggaggaggca
gccaataagaagcttgccctgcagaaggctttggaggtgaaggaagtcagtccaatgtca
gcagccaacatctcaattgctgcttttgtaaagcaaaatcgagatgcactctctcgcagg
tcgtccatcaacagcattcagtcacttaaggagcaacagcggtcatcaaaggccatgtca
gtgtgggagcagaggaccaaccagttaaggagacacaacatgagggcgagcagcgaggct
ttgttcaatgaactcgatccagaagagcgcctccgcgtgtcctctgccctccacctgcat
cctgacatgaagactcacctggaccggccacttgtagtggaggccagggacggtgacaaa
cccagtaggcctgctgaaggaggacgagaggaggcaggggatccccagcaggatggggac
aatttccacccgcagtccaggaagcatcaccggcaccgcgacaagaatggggagagtagg
gatggaggcgagggccggggagggcggcaccacactcatggcagccggagcagagagcac
aatacagatggtgctcagacaaaggagaggagaggggacaggagccacagccgtgatgga
gggcagggtcacagacaccaccatcatactggttctcctgaggacgaggccaatgatgtg
cgaggacgaggagaggaaagggggcatcgccatcatcactcccaccgtgctcaaaaagag
gaaaatgggatgatagcaaatggtgcacagggagaacgcaaggggaagggaggaggagga
atggacagtaatggagagaggaagggacgctgctcacgtatggtcagagctcagtcaaca
ctggatggagacgactgcaagagaaacaagaatggaaccaaaggtcactgggagaggcag
ccagatgctgaggtggatggccttgcctccagtcctctgcaggcaatgcagagtagcctg
agtcttggagaaaagcaagaggatgctgacaaccagaaaaactccaccagggccagccag
gccggcctcaacagcaatgctatccacatccctgtcaccatcaccgccccgcctggagaa
accaccatcatacccatgaacaacattgacaacttccagctcaatgaggagaagaaagat
ctggaggaggcggcggccgctaatgggcctcgacagatccttccctacagctccatgttc
atctttgggcaaacaaacccggtgcggcggctgtgtcattacgtggtcaacctacgttac
tttgagatgtgcatcctgatggtcattaccatgagcagcatcgcactggcagctgaggac
cccgttcaagccaacgcaccacgcaacaacgttcttaaatatctggattacgtctttact
ggagtcttcacttttgagatggtgattaagatgatcgacttgggactgctcctccatcct
ggttcttattttcgtgacctgtggaacattctggacttcattgtggtcagcggtgctctg
gttgcctttgcctgctcgagccttatgggatcgcaacaaagcgtggccagagggacgaaa
ggcaaggacatcaacaccatcaagtccttgagggttcttcgagtcctgcggccactcaag
accattaaacggctgcccaagctgaaggcggtgttcgactgtgtcgtaaactctctgaag
aatgttcttaacatcctcatcgtctacatcctcttcatgttcatcttcgctgttatcgct
gtgcagctatttaagggcaaattcttctactgcactgacgagtccaagggcctggagaaa
gactgcaggggtcattttctggactatggcagagatgacgtagcagctcagcccagagag
tggaagaaatatgagttccactacgacaacgtcctctgggcctttctaacgctctttact
gtctccaccggagagggctggccagtggtcctgaagcattctgtggatgccacttatgag
gacagaggccccaacccaggcttccgcatggagacatccatcttttatgtggtctacttt
gtggtgttccccttcttctttgtcaacatattcgtggctttgatcatcattaccttccag
gagcagggagacaaggccatgtcagagtgtagcctggagaaaaatgagagggcttgtatc
gactttgcaatcaacgccaagccactgacaagatacatgccagagaacaagcagtccttc
cagtacaagatgtggaaatttgtggtgtcgcctcctttcgagtacgccatcatgacctta
atcgccctaaacacagttgtgctgatgatgaagttctacgacgctccagtgctgtacgag
tccatgctgaaatacttaaacatcgttttcacagccctcttcacgctcgagtgcgtcctc
aagattattgccttcggtccactgaattacctgaaagcagcctggaacgtgtttgacttt
gtgactgtgcttgggagcatcacagacatcttggtcacagagattaagacggacaagatg
atcaacttgagtttcctgaggctgttcagagcagctcgtctcatcaagctgctgcggcag
ggctacaccatccgcatcctgctatggacctttgttcagtccttcaaggctctgccgtat
gtctgcctactcattgccatgctgttcttcatctatgccatcattggaatgcaggtgttt
ggaaacatcgagctgaatgaagacaccgaaataaatcaccacaacaactttcagaccttt
ttccaggccttgacccttctcttcaggagtgcgacaggcgaatcatggcatgagatcatg
ttagggtgtctcagcaaccggccgtgtgataagctctcaggaaccgtggggaaggagtgt
ggaagtgactttgcctacttctactttgtttccttcatcttcctctgctccttcctgatg
ttgaatctttttgtcgctgtcatcatggacaactttgagtatttgaccagggacgcctcc
atcctggggcctcatcaccttgatgaattcatccgtgtgtgggcggagtatgaccctgct
gcctgtggccgcatgacatacctcgatatgtacaagatgcttcgcgacatgtcccctcca
ctaggtttgggaaagaaatgcccccctcgggtcgcatataagcgattggtgaagatgaac
atgcccattgcagacgacaacacagtgcacttcacctccacgctgatggccttgattcgc
acagccctggagatcaaactggcatctggggtcctggcgcagcatttgtgcgatgttgac
ctgaagagggagataaaccgagtctggcccaacctgtcgcagaagactgtcaacctgctg
gtgacgccacctaaatacaatgagttgactgtggggaaagtctacgcagctctaatgatc
tttgactactataagcaaaatcgtgccaagagactccagcagcagcagtcttcaggggga
cctcagagtaaactgtcggcgttattccgtcctgtgttgcccctcactcacatactggaa
gtagaaccaccgttccccagtcccaaacagcccctcccacccaagcctgggccagagcca
aagccagaggcaccacccaccaccatcaccaccactgccactactgccacctcggttaac
agggatacaatactaaaccatagaagtgccataaaacattcccagtccggagatgtttct
caggcagcacagaggcctaaaggccgaagaaaactacagaggggccagtcagaggatgtg
ccatattccaccagacctcaggaactggttgaactgaagcaggtggagaacatttcagac
acagaaggatatccaagccaggaaggccactgcagagcagcttctctgccccgactcaat
gctgagtattaccggagccaccctcgccacgcccctgggacccacctggcaccaattgtc
gacctcagtcctataaaacgctcagcgtcctcgttgacacagcagcaccaccaggaggcc
ggcctgagggagtacaacctggaacggcccaacttggcccagtcctcaacagggccaggg
caagtccagggccaggacagagcccaccaccatcaccaccaccaccgctgccatcgacgc
agggacaaggacaaagacaagaagcagaagtccttggatagagctacatcagtgcaaccg
tccagcactgttggttcctttaccgacccttcagctgaaggcatgtccagagaacgagcg
agggagcgggaccgcagccggcctcatgagagaaggcaccactcctcagcaggagagaag
cagcgctactactcttgcgagcgctacggcagcagggagcagtgtcacaccaagtcagct
ggtcccagtcgatccacatcccccggagagggacaggatgctggtttgcttaaacagcac
ggtagcagtgtggttaaaggtggccttgtaatgctcccctctggttcgagtactccgggc
cgcagtcgcaggcagctccctcagacgcccctcactcctcgtcctgctgtggcctataaa
actgccaactcctcacctctcccgtccggggccagcaccactatgacagggcatcagact
cacttccgccgtggcctttcagagcatgatcgcttattcgggggcctcgacgagtccccg
atgcccatcacccgcattggctcggaccctaatttaaaccggcagtcacaggtcacttct
caacaagccctccttgaagatacagaggacttccatgacactgtaagcagccatggagag
ggactctctgccagaaccactgcctcctctacagcttcagcttcacatggaactgctgct
gcacccgtctcagtgcccgccacacacagccgggcaggagtggtgcctaatgggtaccac
ttcacagtcggggtcaactctgcgtctgggcctgggagccgagacacaggaagactcagg
gagagggacgaagaggactggtgctaa
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