Larimichthys crocea (large yellow croaker): 104922999
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Entry
104922999 CDS
T04659
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X4
KO
K21072
A-kinase anchor protein 28
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104922999
Membrane trafficking [BR:
lco04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104922999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank_2
C1_2
SOS1_NGEF_PH
PH_13
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
104922999
NCBI-ProteinID:
XP_019120052
LinkDB
All DBs
Position
III:complement(35924079..35961548)
Genome browser
AA seq
1820 aa
AA seq
DB search
MELSRRKVPLYGQAKVFALLEGLDSVPEDAEVYIVLEGSTLVHVTRAQSDVMLCFIVPGH
NLAEVVSVQAYLCSATTPLTWVGGASLEYVQDDAQDLAEHLVIHGHCLTSTDHKELSSLF
NLGQESSRWAMDRRVALAMANLDIPQNWNVLGSQSGDEHTLRESPLHLAVRWGLYWLAEL
LLCQPGGLMAVSLPNEEGVTPLQLARTAGNTELLELLTHPPNPLATPPAGLSQVWADRSR
LLRFCHDTGNLTLTVRQNLRWSSEESRHADILLLRDRLRDDDFLREIKALRREHVETILE
KEELVDDPTENALYPDINGGTSAVEENDYEEPLMFCLNGEDEEDDPPQPDSEKNQSIRES
QASSPTLAAAARLSAMIHGKDRVYANTMLVDQVDGADIKYRSPGEDEVSPEPCVGSHHWD
SFSMTPPDLRNCSQNRHPSSPRNGERGIRGPSLENHREPSSCVSPPSPFASSPSFPSSPL
ASPFRLFEGAHRRQAHSCLPVSPALNRRGCSLTETSRGLSPSLECDSGEEDILGHSYPCS
SLKQQSILRSSSGEERDSFDTSPDFNRTHSDSTYPSTKNPEEAEVRLRSYSYSSPKAKPS
RPLLNRDAAISDLAEEQRAFSLTDTSREKRVLGFRKRAQSAEEESSASLQHLTLTEFLKE
IEDEEWDKYIIPSKVESEKYKVSRTFSFLKSRMSSTRNKTKVKGKEVKEGKEKSGAANGH
QFVPVSPSGPAPCVACDKPVSGKELLQCSNCFLNVHKNCRESVTACGKKPQERNALLIKS
KTLSLPQNSVKDNSPACVFSSSTSLPTMAREKRETVAPLSKSLSISIDSRRLSDAAGGDS
ECSVTACTNSSLSDEGTPVTVTPPSTEPPITAQDAVDASLLSDLSADLLGLEVESWSLAV
SPEFCRQHDRRTIKRQDVIYELMQTELHHIQTLTVMSEVFRRGMLEELQLDWDCVARIFP
CLDLLLVFHRNLFGALQECRQAAMQPDNPRNYLIRQIGDVLLQQFSDENAEKMKQVYGEF
CSHHTEAVNVFKELQQQNKKLQNFVKQQSNNSLVRRREVPEFILLVTQRITKYPVLLERI
LQYTQEGSQEHSDLSSALAQIRDIIATVDLTVSKYEKCQELQEVLARLENKSFAKLKNGK
VFRKQDLHSKHRDLQHKGLVYWKTATGRLKDTLVLLLTDVLVFLQEKDQRFIFAAVDQKP
PVIPLQKLIVREVANEERGMFLISASSVGPEMYEVHTTSRDERNAWMKHIRQAAESCPEE
EEEEERSPETEEARRAAEVRAQKITKFQETLLDQDQRICKSLEEKLQLYAELTELTLHSP
EPAPHRHLLVQSDTDSETPRQASSLLTAALREAENLMAILQARDSLSAQSQTSPVRGPEG
CSYNSHGSSVQESPSEPDYLSTLSMSSTSLGSDNELTGLDSVLWSSAVELRRGDTKATLL
KVAESVQSLTQLLYSLQAVVTLQDSCHEVQKLLLQEGERPQLRTLTSLQNSLEQEKHRSI
DKKKEEVEKKGLERKKEEVDEVQKLHVKLKQEQQRWDKECLAREKQQSEQESVLEQREQQ
CLLEAERLRCEREELEAQLLEYQQNLDRLREGQRSVEREKEKIEAQQRLLQSWRHNRQSS
LPVTIPLDGYKVSSHSRSGSLDGNCSVYENEAALFASLQQNHVHQPANNNQHQCLFSAPR
KNHDAPLHSSAYTANLGLSASLYNSLNTLLSQAHSKQPPDGVTYPDYSNNHGCPRPPNDS
IHPFSSRVTAPSQRTNNTDFSPLLDRQSLGPWRSEVTGHRLYKEDYSSSPSLTPLLPPQA
YLSLEGQNGEEAGEENIVYL
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagcaggaggaaagtgcctctgtatggccaggcaaaggtatttgcgttgctg
gagggtttagactcggtgccagaagatgcagaggtctacattgttttggaaggatccaca
ttggtccatgtaaccagggcccagagtgatgtcatgctctgctttatagtgcctggacat
aacctggctgaggtggtctcggtccaggcctacctgtgctctgcaaccacacccctcacc
tgggtgggcggggcttcattggagtatgtccaagatgatgctcaggacctggcagagcac
ctggtaatccatggacattgtctgacttccacggatcacaaggagctgagcagcctcttc
aacttgggccaggaaagctctcgctgggctatggatcgtcgtgtggccctggccatggcc
aacctggatatcccccaaaactggaatgtactgggaagccaaagtggagacgagcacact
ctcagagaatctcccctccacctggcagtgcgatggggtctgtattggttggcagagctg
ctgctttgtcagccagggggtctgatggctgtcagtctgccaaacgaagagggagtcacg
ccgctgcagctggcacggacagcaggcaacaccgagctcctggagctgctcacccaccca
cccaaccctctagcaacacctccagcaggtctgtcccaggtgtgggcagaccggtcccgc
ttgctaaggttctgtcatgatacggggaacctcactctaaccgtacgtcaaaacctgagg
tggagttcggaggagagccggcatgccgacatactgcttctcagagaccgcctcagagat
gatgacttcctcagagagatcaaagcactacgaagggaacatgtggagacaatcttagag
aaggaagaactggtggatgatcctacagagaatgcactgtatcctgatatcaatggagga
acctctgctgtagaggaaaatgactacgaggagccgctgatgttttgtctgaatggggag
gatgaagaggacgatccaccacagcctgactctgagaaaaatcagtccataagggagagc
caggcctcgtctccgactctggcggcagctgccagactgtcagcgatgatacatggcaaa
gaccgagtgtatgccaacaccatgctggtggatcaggtggatggcgctgacattaaatac
cgctctccaggggaggatgaggtgagccctgagccctgtgttggcagccaccactgggac
tccttctccatgactccccctgacttaaggaactgctcccagaatcggcacccatcctca
ccgcgcaacggggagaggggaatccgaggccccagcctggagaatcacagggagccatcc
tcttgcgtctctcccccctctccctttgcttcctccccgtcttttccttcctccccgctg
gcttcccccttccgtttgttcgagggagcacataggcgtcaggcgcactcgtgcctgcca
gtttctcctgctttgaatcgcagaggatgcagcttaacggagacgagccggggattgagt
cctagtctcgagtgtgacagtggagaagaggacatactgggacattcgtacccctgctcg
tctttaaaacagcagtcaatcctgcgatccagctcaggagaggagagggactctttcgac
acatcaccagactttaaccgcacacactctgacagcacgtacccgtccaccaagaaccca
gaagaagcggaagttcgtctgcgctcttactcctactcatcccccaaagcgaagccgtca
cggccgttgctaaaccgagacgcagccatcagtgacctggcagaagagcagagagcattt
agcctgactgatacttccagagaaaagagggttttgggtttccgtaagcgggcccagtca
gcagaggaggagagcagcgcatcactccaacatctcaccctcactgagttcctcaaagag
atcgaggacgaggagtgggacaaatacataatcccgtctaaagtcgagtcagagaagtac
aaagtcagtcggacctttagcttcctcaagagcaggatgtccagcactcgcaacaagacc
aaggtgaaggggaaagaggtgaaggagggaaaagagaagtcaggagccgctaatggacac
cagtttgttccagtgtctccatctggtcccgctccctgtgtggcctgtgataagcctgtt
tctgggaaagagctgctgcagtgctccaactgtttcctgaatgtacataaaaactgtcga
gagtctgtcacagcctgtggaaagaagccacaggagaggaatgcactgctgataaaaagc
aagaccttgtctctcccacagaactctgtaaaagacaactccccagcctgtgttttctct
tcttccacttcacttcccacgatggccagagaaaagagagaaacagtcgcccctctctcc
aaaagtctctctatctctatagacagcaggcggctgagtgacgcagcaggaggcgacagt
gagtgcagtgtgacagcttgcactaacagttcattgtctgatgagggaactccagtcaca
gtgactcccccgtcgacagagccgccaatcaccgcacaagatgctgttgatgcttctcta
ctgagtgacctgtcagctgacctgctgggactggaggtggagtcgtggagtctggcggtc
agtccggagttttgcaggcaacacgacaggcgcaccattaaacgacaggatgttatttat
gagctgatgcagacagagctgcaccacattcaaaccctgacggtcatgtcggaggtgttc
aggagaggcatgctggaggagctgcagctcgactgggactgtgtggcccggatcttcccc
tgcttggacctcctgctagtctttcacagaaacctctttggagcactgcaagaatgccga
caggctgcaatgcaacctgacaaccctcgaaattacctcatccgacagattggagatgta
ctgcttcagcagttctcagatgaaaatgcagagaagatgaagcaggtatacggagagttc
tgcagtcatcacaccgaagctgtcaatgtcttcaaagagctgcagcaacaaaacaaaaaa
ctccaaaactttgtcaaacaacagagcaataactcgttagtcagacggagagaggtgcca
gaattcatcctgctggtcactcagcgcatcaccaagtatccagtgctgctggagaggata
ttacagtacactcaggaggggagtcaggaacactctgacctgtcaagtgccctggctcag
attcgcgacatcattgctacagtggacttgactgttagtaagtatgagaagtgtcaggag
ttgcaggaagtgcttgctcggctggagaacaagagcttcgccaagctaaagaacggcaag
gtgtttcgcaaacaggacctgcatagcaaacacagggatctgcagcataaagggctggtc
tactggaagactgccacgggacgtctaaaagatactttggttctcctgctcacagacgtt
ctggttttcctacaagagaaagatcagcgctttatatttgctgctgtggaccagaagccc
cctgtaatccctctgcagaagctaattgttagagaagtagccaatgaggagagaggcatg
ttccttatctctgcctcctcagtaggaccagagatgtatgaagttcacacaaccagcaga
gatgagaggaatgcatggatgaaacacatacggcaagctgcagagagttgtccggaggaa
gaggaggaggaggagcgaagtcctgagacagaggaggcaaggcgagcagcagaagtgaga
gctcaaaagatcaccaagtttcaagagacactgttggatcaggaccagcgaatctgcaag
agtctggaggagaagttacagctttacgctgagctaacagagttaacactccactcacca
gaacctgcaccacatcgccacctgctggtacaatcagacacagacagtgagacgccacga
caggcctcctcactgctcacagctgcactcagagaggcagagaacctgatggccattctg
caggcccgagacagcctttctgcacaaagtcaaacctctcctgtccgaggaccagagggc
tgcagctataacagccacggcagcagtgtccaggagtctccctctgagccagattatctg
agcacgctcagtatgagctccacctctcttggatcagacaacgaactgacagggctggac
agcgtgttgtggagctctgctgtcgagctgagaagaggagacaccaaagctacgttgtta
aaggtggcagagagtgtccagagtctgactcagcttctctatagtctgcaggctgtcgta
accctccaggacagctgccatgaagtccagaaacttcttctccaggagggagaaagacct
cagctccggaccctcacttctctccaaaacagtctggagcaggagaagcacaggagtatt
gacaagaaaaaagaggaagtagaaaagaagggtttagagaggaagaaagaagaggtggat
gaggtgcagaaacttcatgtgaagctgaaacaggagcagcagcgctgggacaaagagtgt
ttggccagagagaaacaacagagtgagcaggagagtgtgctggagcagcgagagcagcaa
tgcctcttggaggccgagcgtctgcgttgtgaacgcgaggagctggaggcccagctgctg
gagtatcagcaaaatctggaccgactgagggagggtcagaggagtgtggagagggagaaa
gagaagatcgaagcccagcagaggctgctgcagagctggagacacaaccgccagagtagc
ctgcctgtcacgataccactggatggttacaaggtgtccagccacagccgctcaggtagc
ctggatggtaactgctcagtatacgagaatgaggcggctttatttgcctccctacagcag
aaccacgtccaccagcctgccaacaacaaccagcaccagtgtctgttctctgcaccaagg
aagaaccatgacgcccctctgcacagttccgcctacaccgccaaccttggcctcagtgcc
agcctctacaacagcctcaacacccttctgagccaggcacacagcaaacagcctcctgac
ggtgtcacatacccagactacagtaacaaccacggctgcccacggcctcccaatgactcc
atacaccccttcagcagcagggtcactgcaccgtcacaaaggaccaacaacacagacttt
agcccactgttggacaggcaatccctgggtccctggaggtcagaggtcacgggtcacaga
ctttataaggaagactactcctcgtctccctctcttacccccctgcttcccccccaggct
tacctttccctagaaggacagaacggggaggaggcaggggaggagaacattgtttatctc
tga
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