Larimichthys crocea (large yellow croaker): 104923059
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Entry
104923059 CDS
T04659
Symbol
nbn
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03440
Homologous recombination
lco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104923059 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104923059 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lco03032
]
104923059 (nbn)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104923059 (nbn)
DNA replication proteins [BR:
lco03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
104923059 (nbn)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
104923059 (nbn)
BRCA1-C complex
104923059 (nbn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
DUF7813
DUF3712
Motif
Other DBs
NCBI-GeneID:
104923059
NCBI-ProteinID:
XP_010734343
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Position
XIII:16498475..16512070
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AA seq
857 aa
AA seq
DB search
MWILTPLQPGGETHYLLSSKDYVAGRKNCDILLPSDQSISRAHAHLTATDQTLTLKDTSK
YGTFVNGQQLTANTPVNLKSGDNVTFGVFESKFSVEHQKPVVCSSCLDNDGKTSLTQALL
AVGGKLVNTWTQDCTHLVMPTAKVTIKTICALLCCRPIVKPEFFSELGKAAQQKLPPPKA
ESFIPEIDEPSLSKEDVNLGAIPVRKQLFAGKTFIFLSAKQLKRLSAAVGFGGGRSQLLE
EGSLPRDVLESPQSCVIDATTGSSQPLLSSSTTEWANTVKNIVQRKGLRVIAESEIGLAA
IYASCDQYCNPSRLITDSESVPKVNPRIPSASMSQSVAVDETVLPAASQNITAYVANTEQ
SQGYHQAFTDTRPLTELSRVTGVTSVGETPEKKQNQNTSQLHGSKPVAPKTASQCIVADT
MSVSFNTVEDTYSQRKKPESKPTGAGSSGVRSQQSFPRTNGGPKTLLQRQSPQKPKNSAE
ASPQKQSTLTSFFQPVNKKRPLEDEFFFSDMSEPKRPALESSVSTRAPNTSVMSKETPSR
SGRVSAAASASDLFGGQSEVRAVAVKEEPRSRKRKEMEEEIQMDELESIMSEDMDCFDEQ
PSINEGKQAQPILFSSTGKKEGLDTVEASSSSKRPRVHLEENGTNKRPQLGLETESGSST
KKNSQKSEQRIVSIKTEPVDPLECRTTFNESSKRREVPSASTSTNIEPFEDDASFIEDLE
LLAVDICQPKEETKTVEIKQEVQESKIDEDENLPKKLVLVEFRSLTVGAPPKTKPQQPQN
NGYAKNFKCFRKNNVPGRERSSHIIGGSDLLVHNRGKNTDLDEWLKDAAEEERRSKRDET
IGDDLFRYNPTKLSKRR
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcctgacgccgctgcagcctggaggtgagacccactatctcctctccagtaaa
gactatgtggcgggccgcaagaactgtgacatcctcttacccagcgaccagtccatcagc
agggctcatgctcacctcactgctactgaccagacgctgactctgaaagacacctccaag
tatggtacatttgtcaacggccaacagttgacagcgaacacaccagtgaacctgaagtcc
ggggacaatgttacatttggtgtttttgaaagcaaattcagtgtggagcatcagaagcca
gtggtgtgttcgtcatgtttggacaacgatggcaagacatcgctcactcaggctttgctg
gccgtgggtggaaagctggtcaacacctggactcaggactgcacccatctggtcatgccc
actgctaaagtcaccatcaagactatttgtgctctgctgtgctgtcgtcccatcgtgaag
cctgagttcttctcagagctcggcaaagccgctcagcaaaagttaccccctcctaaagct
gagagtttcatccctgagatcgatgagcccagcttgagcaaagaggatgttaaccttgga
gcgattccagttcgcaaacagcttttcgctggaaagactttcatattcctcagtgccaaa
cagctaaagcgtctgagtgcagcagtgggtttcggaggtggcaggagtcagctgctggag
gagggctctctgccccgggatgtgctggagtctccacagagctgtgtgatcgatgctaca
acaggcagctcccaacctctgctttcttcctccaccacagagtgggcaaacactgtgaag
aacattgttcaaagaaaaggccttcgtgtcatcgcggagtctgaaattggtttggctgct
atctatgcttcttgtgaccagtactgcaatccatcccgtctaataacagactcggagtca
gtaccaaaagtgaatcccagaattccaagtgcttccatgtcacagagcgtggcggtggat
gagaccgtgttacctgctgcatctcagaacatcacagcttatgtagccaacacagagcag
tcacagggataccaccaagcattcacagacacgcgacctttgacagagctaagcagagtt
acaggggtgacgtcggttggagagactcctgaaaagaagcagaaccagaacacaagccag
ctccatggatctaaacctgttgctccaaagacagccagtcagtgcattgtggctgatacg
atgagcgtgtcgttcaacactgtagaggacacatactcccagaggaagaagccagagtcc
aaaccaacaggtgcaggcagtagtggcgttaggtcccagcaatccttccccaggaccaat
ggtggcccgaagacactcctacaaaggcaatctcctcagaaaccaaaaaactctgcagaa
gcttcgccacagaaacaatcaactctgaccagtttctttcaaccagtcaacaagaaacgg
cctttggaagacgagttcttcttctctgatatgtcagagccaaaacggcctgcactggaa
tcatccgtcagcacacgggcaccaaacacctcagtcatgtctaaagaaacaccctcacga
tcaggcagagtctctgcagcagcatcagcatctgatctttttggaggacagtcagaagtt
cgggcagtcgctgttaaggaggagccacggagcagaaagaggaaggagatggaagaagag
atacagatggatgaactggagtctatcatgtctgaggacatggactgcttcgatgagcag
ccttcaattaatgaaggcaagcaagcacagccaatattgtttagttcaactggaaagaaa
gaaggtttagatactgtggaggcttcatcttcaagcaagagaccaagggtccacctcgaa
gaaaatggaaccaacaaaaggccacagctgggcctcgaaacagagtcgggttcctctact
aagaaaaacagccaaaaatctgaacagcgtattgtctccatcaagacagagccagtcgat
cctctagaatgcaggacaacttttaatgaatccagcaaacgtcgagaagtgccatctgcc
agcacgagtacaaacatcgaaccatttgaagatgatgcgtctttcattgaggatctagaa
ctacttgcagtagatatttgccagcctaaagaagagaccaaaactgttgaaattaagcag
gaggtccaagagtcaaagattgacgaggacgaaaaccttcctaaaaagctggtgttagtg
gagtttcgatctctcaccgtgggcgcgcctcccaaaaccaaaccacagcagccgcagaac
aacggctacgcaaagaacttcaaatgtttccgcaagaataacgttccaggccgagagagg
tcatcccacattattggagggtctgatctgctggttcacaacaggggcaagaacactgat
ctggatgaatggctgaaagatgcagctgaggaggagcgtcgaagcaaacgggatgagact
ataggagatgacctctttaggtataaccccaccaaactgagcaagagaagatga
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