Larimichthys crocea (large yellow croaker): 104923121
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Entry
104923121 CDS
T04659
Name
(RefSeq) ubiquilin-4
KO
K04523
ubiquilin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104923121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104923121
03051 Proteasome [BR:
lco03051
]
104923121
Membrane trafficking [BR:
lco04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
104923121
Proteasome [BR:
lco03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104923121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
YukD
UBA_7
CUE
UBA_HOIP
Dsc3_N
UBA_NBR1_C
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
104923121
NCBI-ProteinID:
XP_019119895
UniProt:
A0A6G0HS41
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All DBs
Position
XIII:39711998..39718601
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AA seq
600 aa
AA seq
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MADQGAADPGNNNNNKPEASEGTIIKVTVKTPKDKEEIAIAEDASVTQFKEEISRRFKAK
QDQLVLIFAGKILKDGDSLSQHGIKDGLTVHLVIKTAHKAGDGGSTSASSSTSTQAGNTS
TSSPGTIPPPTAGSTGPAAPPTQTPNILTGFGDLAGLAGLGMGSANFMELQQQMQRQLMS
NPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMEL
ARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGSNPFSALGG
TSDSGVQPSRTENREPLPNPWGPPNSSNPSEGGGGTTGSTSTPGGTNPSVSNPLGINPGS
LGNGMFNSPGMQSLLQQISENPQLMQNMLSAPYMRSMMQSLAQNPELASQVLMNNPLFAG
NPQLQEQFRSQLPIFLQQMQNPEALSVMTNPRAMQALMQIQQGLQTLQTEAPGLMPSLMS
GGVPGIPTGGVPGIPTGGVPGIPTAGGMPTENPASSPSSAGTNAAQQQLMQQMLQMFAGG
GGGGGGGSATTQTPEVRFQSQLDQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaggcgccgcagatcctggtaataacaacaataataagcctgaagcgtcg
gagggaactattatcaaggtcacagtaaaaacccctaaagacaaagaagaaatcgccatc
gcagaggatgcctctgtcactcagtttaaagaagagatctcgaggcgattcaaagccaaa
caggaccagttggttctcatttttgcagggaagatcttgaaggacggcgacagcctcagc
caacacggcatcaaggatggcctgacagtacacctagtcataaagacagcacacaaggca
ggagatggcggtagcacctcggcctctagctcaacctccactcaagcaggcaatacctcc
acctcgagtccgggcaccatcccccctcccacagcaggatctactggccctgcggcacca
cccacacagacgcccaacatactgactggcttcggtgacctggctggtctggctgggctt
ggcatgggctcagctaacttcatggagctgcagcagcagatgcagaggcagctcatgtcc
aacccagagatgctctctcagatcatggagaacccgttggtgcagaacatgatgtccaac
ccggacctgatgagacagatgatcatggccaaccctcagatgcaacagctgatggaacgc
aaccctgagatctcccacatgctcaacaaccctgagctcatgagacagaccatggagctg
gccaggaaccctgccatgatgcaggaaatgatgcggaaccaggaccgtgctctgagcaac
ttggagagcatcccaggaggttacaatgccttgcggaggatgtacacagacatccaggaa
cccatgttcagcgctgccagggaacagttcggtagcaacccattctcggctctaggtggg
acctctgattctggtgtccagccatcaaggacagagaaccgtgagcccctgcccaatcca
tgggggccaccaaattcttctaacccctctgagggtggagggggcaccacaggaagcact
agcacccctgggggcaccaaccccagtgtgtccaaccctctgggtatcaatcctggcagt
ctgggcaatgggatgttcaacagcccgggcatgcagagcctactgcagcagatctcagaa
aaccctcagctgatgcagaacatgctgtctgctccctacatgcgcagtatgatgcagtca
ctggcccaaaacccagagttggcatcccaggttttgatgaataaccccttgtttgctgga
aacccacagctgcaggaacagttcagatctcagttgcccatctttctgcagcagatgcag
aacccagaagccctgtcagtcatgaccaatccccgggccatgcaagctctaatgcagatc
caacagggtttacagacactgcagacagaagcgccaggcctcatgcccagtttgatgtca
ggtggggttcctggcatacccacaggtggagttcctggcatacccacaggcggagttcct
ggcatacccacagcagggggcatgcccacagagaaccccgcctcctcacccagcagtgca
ggaacgaacgctgcccagcagcagctgatgcaacagatgctccagatgtttgctggtgga
ggaggaggaggaggaggaggaagcgcaacgacccagaccccagaggtgcggttccagtcc
cagctggaccagctgagcgccatgggcttcattaaccgcgaggccaacctgcaggccctc
atcgctactggaggagacatcaacgccgctattgagagactgctgggctcacagccctcg
taa
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