Larimichthys crocea (large yellow croaker): 104923144
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Entry
104923144 CDS
T04659
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104923144
04091 Lectins [BR:
lco04091
]
104923144
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104923144
Lectins [BR:
lco04091
]
C-Type lectins
Others
104923144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
SUEL_Lectin
Lectin_C
OTU
GPS
Motif
Other DBs
NCBI-GeneID:
104923144
NCBI-ProteinID:
XP_027146940
LinkDB
All DBs
Position
XVIII:5976419..6017450
Genome browser
AA seq
2424 aa
AA seq
DB search
MCQIYLHLLFLVTLSCPFCAENTTKITVPCPEEQKAFRGSCYEFVSLQRTFSGAQAWCEQ
RGGHLAFIPDEDTQYFLQRHLDPKKDMWFGAAPSTDLQIPPTVEGPFIWLNGSYITYSNW
VSSPQPGAACGHMLRDSGFQWEATIHCNREMAFICQFESGRSIVCAGRNTTLQCGSGQVL
MIDGGFYGRENNYYCRSTLSPPTTHKQYQCSWVDVVESLTAQCHGRSLCNITEVVESFSE
PCPQLGSYLSLDYHCNDGLTLSVSIVAAVFDDITISVKWLLHLPEGNLQCNLSPGDGLVI
YLHSPEGLESSMVHKYTHPGTFVVAVECTSRDIHITAQKIITIQEPIRQFGVIRCYAGKL
SFHGTNCRAYYEEQFQIQMEVKAGTNVTYRIQHGGTVLSGLSVVRGNIPQNATLTPEMVK
LFGPGCHQLTLYASNMVTFPEVAADLQMCVLEKVAGLQASVLTARDDCLDSPDITVGVSV
KGGAPVLLLFTFAGENISFSETRKMKTRKEIFHIGHQIQGSVQVKLRAWNIFSSLEVDVD
MFGSCGKDSALKQRKKHVRAVRSSLKITATPSASLNDKNEVIVLTINQDYKDPKKRYQWS
CMNPCKCSGNVDGLTHTIIKSCLPDPFEFNRYHFSVISKNGNSAEKSESVCITVTPQTKI
PHISLICVEGCHPIKQNTDAKIRMNCTGNTQCPNVRWYIEDPDDETSWPDETKQCYKDAN
QRPLVRRMDGGTEYTVSHSVLTKAKTKRQDVTVVLLSGKHLRCSKDNVLESVFLPLGDSS
SNHRLIIKATAKDKSFVAHTTITVQVLDYTDNSNSSVDGLKIVVEAAVARMNKLGILSGE
TLGQMFHSVGNQLNGQSDKKTKQKRQKLREQLLDTMIETVNEVPTKAPEEVQVASRGLSA
VILKDTELSSSAQEEASLFFANISLSLLHMQVNDSGEIQLAASSIVEAASNILDYSSSVS
KNISDALLLALHNTQSALLTFKGDNEEPIVIQKAHIGMLVNRVAPGSVQTKPINLPNNSS
SSFFLPKLPSNILSHRTVDVRMLSLDKNPFSWNDQGNISGLVGALSLTRKDGSDIPVENL
SEDIEILMPRPVGEEVTTSVLDLANYSTTVINISSVYTTLVLKMMPSKDPLPFKLFLGYM
DYPTDTNYIVMTEMPHQGATQEERYTWLVEPEKLKGNTGEHYLLVRPIVGPGIKSIEANL
SITSINTACQFWNATTLDWNSHGCRVGVNTTDSVTQCLCNHLTFFGSSFFVTPNLVDPSR
TAELFATFAENPVVVCFVGALFVVYLLVVVWARRKDVNDVAKVKVTVLEDNDPIDDYCYL
LSISTGYRRGASTSSQVTITLLGSEGNSEPHHLTDPKKCVFERGAVDMFLLTAPYSMGDL
QGIRLWHNNSGSHPDWYVGNVMVQDLQTEQKWHFLCNSWLAIDMGDCSLDKVFSVSTEMD
LKRFSNLFFMKTTKDFHDGHLWYSVISRPPSSTFTCVQRVSCCFSLLLCTMLTSIMFYGI
PADPSEQTMDLGQFEFTWQQFMIGVQSSLIMFPVNILIVSVFRNTRPWETACCKRKTEKP
DALEQTSSPKSATNNINVNVTLETVIKDITRIAHSLSKTVKSNIPCTEPEFGPGQQVDIN
TVLSVVEDFIKHKNKNNDTAQTKTQSLHNLVQPQLPEGSASKHPGSPVEAIQKKSNKTQY
LYRQLCHIDKELNQLGPSGFPTPHSYSQALQQVQGMKGFLEDQLFTFSCYYFTSFTSRLS
PTDSTDGHDRQKKRACCHGGLPWWFIFVGWLLVIATSCVAGYFTMLYGLKFGKQRSISWL
VSMIISFFQSILITQPLKVLCLAVFFALVIKKVDEEDFQNVVTVGNDNNQGDCKVQQTTR
ENNSVYEPPAPTDVEKMRRKKILEQKAFALLREILTYVGFMWMLLLVAYSERDPNAFFLN
QHIRNSFSGQISDSMNLGDVFIWAKTSLLNNLFGVYPGFITDGNSKLVGNARLRQLRVQK
NSCQIAGSMLQLIPDCHAPYSWELEDMGSYDPGWNHSARDNNCTSTSSPWEYQTQSQLRA
YPAWGKIALYRGGGFLTELGPDLQNANSILEYLFRNKWLDMYTRAIFVEFTVYNANVNLF
CIVTLLLESTGVGAFQFNSDLQSVRLYPSTGGLHIFVMIAEIIYLLFILYYMFLQGKLMK
QQRWAYFRSKWNLLELTIILLTWSAVAVFIQRTLLGNRDMTYYQNHKDQFPSFYETARAD
LLLQYLIAFLVLLSTIKLWHLLRLNPKMNMITATLQRAWSDISSFLVVIVIMLVAYSIAS
NVIYGWKISSYKTLADALVTIISLQIGIFNYDEVLNGTPLLGGLLFGSCIVFMTFVVLNL
LISVILVAFNQEQIYHKPSDEEEIVDLMLMKICNLFGIKYKNTKDTPGADVKGDSDLTLN
NGKNIINSSSAGVDIFSTDSSVNL
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgtgccagatatatttacacctgctgttcctggtgacactcagctgtccgttttgtgct
gaaaatacgacaaagattactgttccctgtccagaagagcagaaggcctttagaggttcc
tgctatgagtttgtgagtcttcagcgtactttttccggtgcccaggcttggtgtgaacag
cgtggtggacaccttgcgtttattccagatgaagacactcagtacttccttcaaagacac
ttggaccccaagaaggacatgtggtttggagcagcaccctctacagacctgcaaattcct
ccaactgttgaaggtcctttcatttggctgaatggctcatatatcacctactcaaactgg
gtgagcagcccacagcctggagctgcttgtggacacatgctgagagactcaggcttccaa
tgggaagcaacaatacactgcaacagagaaatggcttttatctgtcagtttgagtcaggg
agatccattgtatgtgcaggtcgtaacaccactctgcagtgtggttctggtcaagttttg
atgatagatggtggcttttatggtcgtgagaacaattattactgtcgatctactctgtct
ccaccaacaacacacaaacagtatcagtgcagctgggtggatgttgtggaatcgttaaca
gctcagtgtcacggccgtagcctctgcaacatcactgaggttgtggaatccttcagtgaa
ccctgtcctcaactggggagctacctgtctttggactaccactgcaacgatggacttaca
ctgtcagttagcattgtggctgctgtttttgatgacatcaccatcagtgtgaagtggctt
ttacatttgccagagggaaaccttcagtgcaatctgagtcccggagatggccttgttatt
tatctgcacagtccagaggggttggagagcagcatggtgcacaaatatactcatccaggt
acatttgttgtggcagttgaatgcaccagccgtgacattcacattacagctcagaaaata
attaccattcaagagcccattagacagtttggtgtcatcagatgctatgctggaaaactg
tcttttcatggaaccaactgcagagcctattatgaagagcaatttcaaattcaaatggaa
gtaaaagcaggtacaaatgtaacctacagaatccagcatggtggaacggtattgtctggt
ttatctgttgtcagagggaatattccccagaatgccacactgactccagaaatggtgaag
ctgtttgggcctggctgccaccagctgaccctttatgcatctaacatggtcacgttccct
gaagtggctgcagacctgcagatgtgtgtgttagagaaagtagccgggcttcaggcctct
gtgctgacagcgagggatgattgtctagactctccagatattactgttggtgtttccgtc
aaagggggggcaccggtgctgctcctcttcacttttgccggagagaatatttcattctct
gagaccagaaaaatgaaaacaaggaaggaaatctttcatattggacaccagattcaaggg
tctgtacaagtaaaactcagagcatggaacatcttctcctctttggaagtggatgtggat
atgtttggttcctgtggcaaggattcagctcttaaacagagaaagaaacatgtaagggct
gtcagaagttcactgaaaatcactgcaacgccttcagcatcattaaatgacaaaaatgaa
gttattgtgcttacaattaatcaagactacaaagacccaaagaaacgttatcagtggtca
tgcatgaatccctgtaaatgctctggaaatgtggatgggctgactcacaccattataaaa
agctgtctaccagatccatttgaatttaataggtatcattttagtgtgatatctaaaaat
ggcaactcagctgagaagtctgaatccgtatgcatcactgttacacctcagacaaagatt
ccacacataagtctcatttgtgttgaaggctgtcacccaataaagcagaacacggatgca
aaaattagaatgaattgtacagggaatacacagtgtccaaacgttcggtggtacattgag
gacccagatgatgaaaccagctggccagatgagacaaagcagtgctacaaagatgccaat
caaaggccacttgtacggagaatggatggtgggactgaatacactgtgagtcattcagtt
cttacaaaagccaagactaaacgtcaggatgtcacagtggtgctactttctggtaagcat
ctgcgttgcagtaaagacaatgtattggagtctgtcttccttcctcttggcgacagcagc
tccaaccacagactgattatcaaagcaacggcaaaagacaaaagctttgtcgctcacacc
actataactgtacaggtgctggattacacagataactccaactcttcagtagatggtctt
aagattgtagtggaggctgccgtggctcggatgaacaaactcggtatactgtcaggagaa
accttgggacagatgttccattctgtgggcaatcaactgaacggccaatctgataaaaag
acgaaacagaagaggcaaaagcttcgtgagcagttgcttgatacaatgattgagacagta
aatgaagttcctaccaaggcgccagaagaagttcaggtggcatcaagaggactttctgct
gtcattctaaaagacactgaacttagctcttctgctcaggaagaggcttcattattcttc
gcaaacatcagcttatctctgctccacatgcaagtgaacgatagtggagaaatacagtta
gcagccagctccattgtggaagctgcaagcaatatcctggactattcttccagtgtgagt
aaaaacatctcagatgcccttctccttgctctacacaatacacagagtgcattgttaaca
tttaaaggtgataatgaggagccaattgtcatccaaaaagctcacattggaatgttggtt
aatagagtggcaccggggagtgtgcaaacaaagcctataaatcttcccaacaactccagc
tcctcattttttcttccgaagttaccatctaatattctttcacatagaacagtggatgta
cgcatgctgagtttagacaaaaacccgttttcctggaatgaccaagggaacattagtggc
ctggttggtgctctatcccttacaagaaaagatggctctgatattcctgtggagaacttg
agtgaggatattgagattctcatgccaagacctgttggagaggaggtgaccacctctgtt
ttggacctggcaaactacagcacaacagtcataaatatttcttcagtgtacactacactg
gtgttaaagatgatgccttcaaaggatcctttacccttcaaactgttccttggttatatg
gattaccctactgacaccaattatatagtaatgacagagatgcctcaccaaggagcaaca
caagaggagaggtacacttggctagtagaacctgagaagttgaagggaaacactggagag
cactatcttttggtgaggcccatagttggtccaggtatcaaatcaatcgaagccaattta
tcgattacctccatcaatactgcatgtcaattttggaatgcaacaacattggattggaac
agccatggatgcagggttggtgttaacaccacagattcagtcacccagtgcctctgcaac
cacctcactttctttgggagctctttttttgtcactcccaacctggtcgacccctcacgc
actgctgagctgtttgcaacttttgctgagaatcctgtggttgtctgcttcgtgggggca
ctctttgtggtctatctcttggtagttgtctgggcacgacgaaaagacgttaacgacgtg
gccaaggtgaaggtgactgtgctggaggacaacgaccccatagatgattactgctacttg
ttgagtatcagcactgggtataggagaggagcctccacttcctctcaggtgaccataact
ctgctgggttcagagggaaacagcgagccacaccacctgacagatccaaagaaatgtgtg
tttgagagaggtgcggtggatatgttcctgctcactgcaccgtactccatgggagacctg
cagggcatcagactgtggcacaacaactcaggaagtcatcctgactggtatgtaggcaat
gtcatggttcaggatttacagacggagcagaaatggcattttctctgtaactcctggctg
gctatagacatgggtgattgttccctggataaggttttttctgtttcaacagagatggat
ttgaagaggttcagtaacttgttcttcatgaagacaactaaggatttccatgatggacac
ctctggtactctgtgatcagtcgaccacctagcagcaccttcacttgtgttcagagagtt
tcctgctgcttttccctgctgctctgcactatgctgaccagcatcatgttttatggcatc
ccagcagatccctctgagcagaccatggacctgggtcaatttgagtttacctggcaacag
ttcatgattggagttcagagttccctcatcatgtttccagtgaatatcctcattgttagt
gtattcagaaacactcgtccctgggagactgcttgttgtaagcgcaaaacagaaaagcca
gatgcccttgaacagacttcctccccaaagagtgccactaacaacataaatgtcaatgtc
actttagaaactgtcattaaggatatcacaagaattgcccattcactgtccaagactgtc
aaaagcaacataccatgcacagagcccgagtttggccctggacaacaagttgatatcaac
actgtcctttccgtggtggaggactttatcaaacacaaaaacaaaaacaatgacactgcc
cagacaaaaactcagagccttcataatctcgttcagcctcagcttccagaaggcagtgct
agtaagcatcctgggtcaccagtggaggcgattcaaaagaagagcaacaaaacccagtat
ctatatcggcagctgtgtcatattgacaaagagctgaatcagcttggaccctctggcttc
cctaccccacacagctacagccaggctctgcagcaggtccagggcatgaagggctttctt
gaagatcagctcttcacattcagctgttattattttacttcttttacatccagattgagc
ccaacagacagcactgatggtcatgataggcagaagaaaagggcatgctgtcatggagga
ctaccatggtggttcatttttgttggttggctgcttgtgattgcaaccagttgtgtagca
ggatattttacgatgctttatgggttgaagtttggaaagcaacgctccataagctggttg
gtatccatgattatctccttttttcagagtatcctcatcactcagccattaaaggtgcta
tgtcttgcagtattctttgcacttgtaataaaaaaagtggacgaagaagatttccaaaat
gtggtaactgtaggaaatgacaataatcaaggtgattgtaaagtccaacaaacaaccaga
gagaataacagcgtctatgagcctcctgctccaacagatgttgagaagatgagaaggaaa
aaaatccttgaacagaaagcttttgctcttcttcgagagattttgacctacgtggggttt
atgtggatgttgctgttggtggcatacagcgagagagaccccaatgcttttttcctgaac
cagcacattcggaacagcttcagtggacagatttcggacagcatgaatcttggagatgtg
ttcatttgggccaaaacatctctactgaataacctttttggagtttatccaggattcatc
actgatggaaactccaagctagttggtaatgcccgccttcgacaattgagagtgcagaaa
aactcctgtcagattgccgggtccatgctgcagcttataccagactgtcatgctccctat
tcatgggagttggaggacatgggctcctatgaccctgggtggaaccactctgcaagggat
aataactgtacaagcacctccagcccgtgggagtaccagacacagtctcagctcagggct
taccctgcctggggcaaaatagcactatacaggggaggtggctttctcacagagcttggg
ccggatttacaaaatgctaacagcatccttgagtatctgttcaggaacaaatggctggat
atgtacactagggcgatctttgtagagttcactgtctataatgctaatgtgaacctcttc
tgcatcgtcacactcttgttggagtccacaggcgtaggagcgtttcagttcaacagtgac
ctgcagagtgtacggctttacccatcgacaggtggccttcacatcttcgttatgattgct
gagatcatatacctgcttttcattctctattacatgttcctacagggcaaattaatgaag
cagcagcggtgggcttacttcagaagcaagtggaaccttcttgagctgaccatcatccta
ctgacctggagcgctgtggctgttttcatccagaggaccctgcttgggaaccgtgatatg
acctattaccaaaaccacaaagaccaatttcctagtttttatgaaacagcccgagcagac
ttattgctccagtatctgatcgccttcttggtcctgctctccaccatcaaactgtggcac
ctgctcagactgaaccccaagatgaacatgatcactgctacactgcagcgagcctggagt
gacatatccagtttccttgtggtcatagtgatcatgcttgtggcgtattcgattgcatcc
aacgtgatttatggttggaagatttcctcatacaaaactttagcggatgctctcgtgacc
atcatcagtttgcagataggcatctttaactatgacgaggtcttgaacggcactcccctg
ctcggtggattactctttggttcctgtattgtgttcatgacgtttgtggtactcaatctc
ctcatctcagtgatccttgtggcattcaaccaggagcaaatatatcacaagccctcagac
gaggaggagattgtcgacttgatgctgatgaaaatctgcaatcttttcgggatcaagtat
aaaaacacaaaagacaccccgggggcggatgtgaagggagatagtgacctgaccctcaat
aatggcaaaaacatcattaacagttcctcagctggtgtagacattttttccactgacagc
tcagtaaacctctag
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