Larimichthys crocea (large yellow croaker): 104923262
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Entry
104923262 CDS
T04659
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04136
Autophagy - other
lco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104923262 (wipi1)
04136 Autophagy - other
104923262 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104923262 (wipi1)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104923262 (wipi1)
Membrane trafficking [BR:
lco04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
104923262 (wipi1)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104923262 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
CPSF_A
Beta-prop_Vps41
EIF3I
Beta-prop_RSE1_2nd
Beta-prop_HPS5
Beta-prop_NWD2_C
BCAS3_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
104923262
NCBI-ProteinID:
XP_010734608
LinkDB
All DBs
Position
XVI:10372020..10380816
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AA seq
443 aa
AA seq
DB search
MESQDAPDGPEVHRGFICASFNQDTTSLSVGTKTGYRLFSVTAVDKLDCIHEGVECPDVY
IVERLFSSSLVVVVSLSMPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQRLVVCLEESI
YIHNIKDMKLLKTLLNTPINPSGLCALSVNHSNSYLAYPGSATIGEITVYDANNLSTLTL
IQAHDSPLAALTFNASGTKLASASEKGTVIRVFSIPEGQRLFEFRRGMKRYVSISSLSFS
ADAQFLCASSNTETVHIFKLEQHSPSQDEESPTWSAYVGKMFTAASTYLPAQVSDMMHQD
RAFATVRLNMFGLKNICALATIQKLPRLLVASSDGYLYIYNVDPQDGGECVLVQKHRLFD
FNEEVEQSEEDKPAEDVSPQPASQSYAATVALPSTPPSSTTLMGYSEDGGAQKGEVIPEH
EFAEGPVCLDDENEFPPVSNQSN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaggacgcgccggacggccccgaagtgcaccgaggcttcatatgtgcctcg
tttaaccaggacaccacgtctctgtcagtgggcaccaagactggctaccggctcttctca
gtcactgctgtggacaaactagactgtatacatgagggagtggagtgtccagatgtgtat
atagtggagcggctgttctccagcagtctggtggtggtggtcagtctgtccatgccacgg
cgaatgaacgtctaccatttcaagaaaggcacagagatttgtaactacagctactccaac
aacatcctctccgtcaggctcaacagacagcggctggtggtgtgtctggaggagtcaatc
tacatccacaatatcaaagacatgaaactactcaagaccctgctcaacacacccatcaac
ccctcaggtctctgcgctctctctgtcaaccacagtaactcctacctggcgtaccccggc
agtgccaccatcggagaaatcaccgtctacgacgccaacaacctgagcactctgacgctg
atccaagctcatgacagtcccctggcagccctcaccttcaatgcctctggcaccaaattg
gccagcgcatcagagaagggaaccgttatcagagtcttcagcattcctgaaggacagaga
ctgtttgaattccgcagagggatgaagagatatgtcagcatcagctcattgtccttcagc
gcagacgcccagttcctgtgtgcctctagtaacacagagacggtccatatctttaaactg
gagcagcacagccccagtcaagatgaggagtctcctacatggtcagcatatgtgggcaaa
atgttcacagcagccagcacctacttgcccgcgcaggtgtccgacatgatgcatcaggac
agagccttcgccactgtacgactcaacatgttcggcctgaagaacatctgcgccctcgct
acgattcagaagctccctcgcctgctggtggcgtcctcagacgggtatctctacatttat
aatgtggatccacaggatggaggcgagtgcgtcctggtccaaaaacacaggctgtttgac
ttcaacgaggaggttgaacagagtgaagaggacaaaccagcggaggatgtctctccccaa
ccagccagccaatcatacgcggctactgtggctctcccttcaacccctccctcctccacc
actctcatgggttactctgaggatggaggagcccagaagggtgaggtgatcccagagcac
gagtttgcagagggcccagtctgcctggatgacgagaacgagttccctccagtcagcaac
cagagtaactga
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