Larimichthys crocea (large yellow croaker): 104923351
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Entry
104923351 CDS
T04659
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like isoform X2
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
lco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104923351
04120 Ubiquitin mediated proteolysis
104923351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lco03110
]
104923351
04131 Membrane trafficking [BR:
lco04131
]
104923351
04121 Ubiquitin system [BR:
lco04121
]
104923351
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104923351
Chaperones and folding catalysts [BR:
lco03110
]
Other chaperones and cochaperones
Others
104923351
Membrane trafficking [BR:
lco04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104923351
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
U-box type E3
104923351
Multi subunit type E3
STUB1-CHIC2 complex
104923351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
CHIP_TPR_N
TPR_2
TPR_1
ANAPC3
TPR_11
TPR_16
TPR_8
TPR_17
TPR_12
TPR_19
TPR_9
ARM_TT21_C
TPR_14
SRP_TPR_like
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
104923351
NCBI-ProteinID:
XP_010734720
LinkDB
All DBs
Position
XII:31452921..31456349
Genome browser
AA seq
394 aa
AA seq
DB search
MFVKHRRHELHELNVRHVSLSVTRESAGGQLVFTGGRSARSGPVRPGPALFGPSSELQLF
TLHRPRLISLIHSSSCSHGSDPIIRIGKQSEEAAAAGAASLVDKMSESPEKSASVSAQEL
KEQGNRLFLNRKYLEAAACYSKAIAHSPSVPAYYTNRALCYVKLQQYDKALADCRHALEL
DSQSVKAHFFMGQCHLEMESYDEAIGNLQKAYNLAKEQRLNFGDDIPSALRIAKKKRWNS
LEERRINQEGELHAYLTKLIQAEKKRELDGCRHREEDKSDDGRVQHSLNEIHSKHDKYLS
DMEELFCQVDEKRKKREIPDFLCGKISFELMREPCITPSGVTYDRKDIEEHLQRVGHFDP
VTRSPLTQDQLIPNLAMKEVIDAFILENGWVEDY
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgaaacatcggagacacgagctgcacgagctaaatgtgagacatgtcagtctg
tcggtgacgcgggagtctgcgggaggacagctcgtcttcaccggggggaggtcggcccgg
tccggccctgttcggcccggtccggccctgttcggcccctcctcggagctccagctgttt
actcttcaccgaccaagactgatcagcctgatccacagcagctcgtgttcacacggttct
gacccgatcatcaggatagggaagcaaagtgaagaggcggctgctgccggcgcagcgagc
ctggtggacaaaatgtcagagagtccggagaagagcgcctcggtgtcggctcaggagctg
aaggagcaggggaaccggctgttcctgaaccgcaagtacctggaggccgccgcctgctac
agcaaggccatagctcacagtccttcagtcccggcgtactacaccaacagagcgctgtgc
tacgtgaagctgcagcagtacgacaaagctctggcagactgccgccacgcgctggagctg
gacagccaatcggtgaaggctcacttcttcatgggtcagtgtcacctggagatggagagt
tatgacgaagccatcggcaacctgcagaaagcttacaacctggcgaaggagcagcggctg
aacttcggcgacgacatcccgagcgctctgcggatcgccaagaagaaacgctggaacagc
ctggaggagaggaggatcaaccaggagggcgagctgcacgcctacctcaccaaactcatc
caggcggagaaaaagagagaactggacggctgcagacacagagaagaagacaagtccgac
gacggcagagtccaacacagcctgaacgagatccacagcaaacacgacaagtatctgtcg
gacatggaggagctgttctgtcaggtggacgagaagaggaagaagcgggagatcccggac
ttcctgtgtggaaagatcagcttcgagctgatgagggagccgtgcatcactccgagcggc
gtcacctacgacaggaaagacatcgaagagcacctgcagcgagtcggccacttcgacccg
gtgacccgctctcctctgacccaggatcagctgatcccaaacctggccatgaaggaagtc
atcgacgcttttattctggagaacggatgggtggaggactactga
DBGET
integrated database retrieval system
