Larimichthys crocea (large yellow croaker): 104923440
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Entry
104923440 CDS
T04659
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104923440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104923440
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104923440
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ion_trans
Ank_3
Motif
Other DBs
NCBI-GeneID:
104923440
NCBI-ProteinID:
XP_019130505
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Position
XXII:complement(14357732..14368257)
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AA seq
776 aa
AA seq
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MDKSEMFGFSLETDDRTEEEKSRGKAAKKSGQGHVSPKAPMDTDYQEQMEETKPQIRFNL
NFDKGIRPVKEDGSKRNSETFDITRLFEAVASGDVTKLSTLHQYLHQNMKKLSNSLYKSY
GKTALMKALLHLKDGKNNTVELLIDISEKMGDINEFVNSAFTNSYYEGQTALHIAIERRS
LAYVKLLVSKKADVHAKACGKFFQPHDGPNFYFGELPLSLAACTNQPDVVDYLLENDYEK
ADPSVTDSHGNTVLHALVVVADNTKDNTEFITGMYDRIIKTTARLHPKLKLEEIENGRGL
TPLKLAAKTGKIGLFSHILQREFQESHTKHLSRKFTEWVYGPVTSSLYDLASVDSYEDNS
VLEILVYGSDIPNRHDMLQTELLNRLLESKWKSFAGRMFFFNFLFYVMYLIIFTVVAYNK
REGKPPFPIEHTRMGYLYLAGQLVTALSNCYFFVIGIKDMWRKRPKLRTLLIDGYYEILF
FLQGLLFILSTILYMLGCKEYLGFLVLCLALSWVNILYYSRGLIHMGVYSIMIQKMILSD
ILRFLFVYVVFLFGFSAAVVTLLIEPPPKNDTHTGKGRLFGPVGSGEDCVKPTFRNISYT
TLQLFKFTIGMGDMEFTEDYQYQAVFYVLLISYIILTYILLLNMLIALMNRTVERTAQES
TSIWKLQRAITILDMERRLTCCLRKRYRCGFNINLGRDDDRMCFRVEEVSWNKWNINLGK
INEDPGYWDRSEQPASDTNTSRPTRGRSWRGMLTGSRRHWQTHLSTEMNPLNTSPV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccgagatgttcggcttctccctggagacagacgacaggacggaggaagag
aaatcgcgggggaaagcagcaaaaaagtctggacagggccatgtgtcgcccaaggctccc
atggacacagattaccaagagcaaatggaggagaccaagcctcaaatcagattcaatctc
aattttgacaaaggtattcgacctgttaaggaggacggtagcaagagaaacagcgaaacg
tttgacatcactaggttgtttgaagctgtggccagtggcgacgtgacaaagctgagcacc
ctgcatcagtacctgcaccagaacatgaagaaactgtccaactctttgtataagtcgtac
ggtaaaaccgccctgatgaaggctctgctgcacctcaaagacggcaagaacaacacggtg
gagctgttaatcgacatctcagagaagatgggcgacattaatgagtttgtgaattcagcc
ttcaccaacagctactatgaaggccagacagctctccatatagccattgagaggaggagt
cttgcctatgtgaagctgctggtcagtaagaaagcggatgttcatgccaaagcttgcgga
aaattcttccaaccacatgacggccccaacttctactttggtgagctgcctctgtctctg
gcagcctgcaccaaccagcctgacgtggtggactacctcttggagaacgattacgaaaaa
gcagatcctagtgtgacagactctcatggtaacactgtgctgcacgctctggtagtggtg
gctgacaacactaaggataacacagagttcatcactggcatgtacgaccgcatcataaag
accactgcccgcctgcaccccaagctgaagctggaggagattgagaatggtagagggctg
acacccctcaagttggctgccaagaccggcaagattgggctcttttcacacatcctgcaa
cgagagtttcaagagagtcacaccaaacatttgtcccgtaaattcactgagtgggtttac
ggacctgtcacctcctccctgtacgacctggcctccgtggattcgtacgaggacaactct
gtgctggagatactggtctacggcagtgatattcctaaccgccatgatatgctccagacg
gagctcctgaaccggctgctggagtcaaagtggaagtcatttgcaggtcgaatgtttttt
tttaacttcctgttctacgtcatgtacctgatcatcttcactgtcgtcgcctataataag
cgggaaggaaagccgccatttcccatcgaacacaccagaatgggttatctgtatcttgca
ggccagctagtgacagcactgtcaaactgctatttctttgtcatagggatcaaagacatg
tggaggaaacgcccgaaactgcggacgttgctgattgatggatattatgagattcttttt
ttcttgcagggcctcctcttcattttgtcaactatactgtacatgctcggctgtaaagag
tacctgggcttcctggtactgtgccttgctctcagctgggtgaacatactctactactcc
cggggtctcatacacatgggcgtctatagcatcatgatacaaaagatgatcctcagtgat
atcctgcgctttctttttgtctacgtcgtcttcctttttggattttcagcagcggtggtc
accctgctcatagagcctcctccaaaaaatgacactcatactggtaaagggcgtcttttt
ggtcccgttggatccggtgaagattgtgtaaaacccaccttcagaaacatctcctacacg
acgctgcagctcttcaagttcaccatcggcatgggtgacatggagttcaccgaggactac
cagtaccaggcggtcttctacgttctcctcatcagctacatcattctcacctacatcctg
ctgctcaacatgctcatcgccctcatgaaccgcaccgtggagaggactgcacaggagagc
accagcatctggaagctacagagggccatcaccatcctggacatggaaagaaggctgacg
tgttgtctgaggaagaggtatcgctgtgggtttaacataaaccttggcagagacgacgat
cgcatgtgtttcagagtggaggaagtcagctggaacaaatggaacatcaacctgggcaaa
atcaatgaggatccagggtactgggatcgttccgaacagcctgcctcagacaccaacacg
agcaggcctaccagagggaggagctggagaggcatgctcacgggcagtcggcggcactgg
cagactcatctatccacagagatgaatcctttgaacacctcaccggtttaa
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