Larimichthys crocea (large yellow croaker): 104923485
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Entry
104923485 CDS
T04659
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104923485
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104923485
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104923485
NCBI-ProteinID:
XP_010734891
UniProt:
A0ACD3RCN7
A0A6G0I2T9
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Position
I:complement(27555443..27557361)
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AA seq
300 aa
AA seq
DB search
MYNMMETEIKTPLPQSNSGSAPGAKNNSVSDQERVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGASAVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHSMNSPQIQQM
HRYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTTSAMGLSSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSAEHSSLQSSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagatcaagaccccgctcccgcagtccaactcgggctcg
gcgccgggcgcaaagaacaacagtgtcagcgaccaggagcgggtgaagcggccgatgaac
gccttcatggtctggtcccggggacagcggaggaagatggcacaagaaaatcccaaaatg
cacaactctgaaatcagtaagcgtcttggggctgactggaaacttctgaccgacgctgaa
aagaggccattcatcgacgaggccaagcgtctacgcgctatgcacatgaaggagcatccg
gattataaataccgtccccgcaggaagaccaagaccttgctcaagaaagacaagtattct
ttgcccgggggactgttagcgccaggagccagcgccgtcaacaactcggtgtcggtgggg
cagaggatggacggttatgcgcacatgaacgggtggacaaacagtgcgtactcactcatg
caggaccagttggcctaccctcagcatcacagcatgaacagcccccagatccagcagatg
caccgatatgagatggcaggtctccagtaccccatgatgtcctcggcgcagacctacatg
aacgcggcttccacgtacagcatgtctccagcgtacacgcagcagaccaccagtgccatg
ggactgagctccatggcgtccgtgtgcaagaccgagccgagctcaccgccgccggccatc
acgtcccactctcagcgggcatgtttgggggacctgagggatatgataagcatgtacctg
cctcccggcggggacagcgcagagcattcctccctgcagagcagccggttacacagcgtc
catccgcactatcagaccgcagggactggcgtcaatgggacgctacctctcacccacatc
tga
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