Larimichthys crocea (large yellow croaker): 104923524
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Entry
104923524 CDS
T04659
Symbol
synrg
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104923524 (synrg)
Membrane trafficking [BR:
lco04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
104923524 (synrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
104923524
NCBI-ProteinID:
XP_027135841
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Position
VII:complement(20220735..20257739)
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AA seq
1461 aa
AA seq
DB search
MALRPGSGGGSSFMYPVGGGLGPPQGMVPMQQQQQQQQQQQGFPMVMQPNMQGMMGMNFG
GQMPPGAMPMQGGMAIGMQTPGMQFLGQPQFMGMRPPGPQYTADMQKQMAEEHQKRLEQQ
QKMLEEDRKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAKMHPTPS
SQTKKPDSSPSHPSVTTHSLPQALSEDNDEFSDFQGPLDAPASFPAPSSSCSSSSTSSTF
GLSSQAHVQPSSSAPKTGFSEEDDDFSDFVQGPVNAFPASNLHLSSQAQVQPSSPSLWAG
MPPSSSSLPQSLPLTVTQHSAVNTSSQSTFQGPSLEEKLFSSCDLTADKTAQISFRPKQS
LAKMGPRAKVSTQFQSSTKSRNWAAAPEDLSSVFVAEKLPEAPVSAPSVPPSAPDSPPQS
SSDSAGVGVYPQTEHIQPMLPGWIYNDSLVPEMFKKVLEFTMTPAGIDTAKLYPILMSSG
LPREALGQIWASANRTTPGMLTKEELYTVLALIGVAQSGLPAMNVEILSQFPSPPVPNLP
ALAMAMAPVMPQHQQPMMTKPPVSMSMSMPTPAPPVMAMTPAAPVQAPTNTNFVASFPPA
QATKADDDDFQDFQEAPKPGAGDQAFTEFQGESGGSFPTTIAPQHQNSAPAMLTPVSGSS
SASVTSSDKYAVFKQLSVDPPAEPTPPASDIGDKYSVFRQLEQPAEKKPVGEGFADFKSV
SADDGFTDFKTANSISPLDPSEQAKIFQPTFPPAFPNSQSLQHLPQQQQQQPAVSLSQPK
NPLNMADLNLFSSIAPSAPAPTETKPSTFPSVSVPPSLVLLPGGAKPPGGGADDFGDFAL
FGSSSDAAQASAAGGAVAAPQDDFADFMAFGSSGGEPKGESSSVGVQGETSTQQRPQQSS
DKYDVFKQLSLEGGLAYDDTKESGGGSFSSLKSDTDDFADFQSSKFCTALGASEKTLVDK
VAAFKQAKEDSASVKSLDLPSIGGSSVGKDDSEDALSVQLDMKLSDMGGDLKHVMSDSSL
DLPGLSAHQPPATEADDMKFDPFGTSGLSTLTSYDWSDREECLPGEVRKPQGSEGASLPS
LVPTQRKELTFGSTENITSSSVAKIITSFPAEDVSSTDDKFEPFADFGSGDQGSVDVEDD
FGDFASTVSEKSDSPAATAETGSEEASDEFGAFQGDKPKFGKSDFLKASAQAKVKSSEEM
IKNELATFDLCVQGSHKRSHSLGDKEIGRSPPSPAPEQAFRDRSNTLSEKPALPVIRDKY
KDLTGEVEESERYAYEWQRCLENALEVITKANNILNGISSSSVCTEVIQSAQGMEYLLGV
VEVYRVTRRVELGIKATAVCSGKLQQLLKDISRVWNNLMGFMSLAKLAPDESSLDFSSCI
LRHGIKNAKELACGVCLLNVDARSKNKEESAIGRLFKRAFNSETDNFKLLYGGHQYHASC
ANFWINCVEPKPPGLILPDLL
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggccgggatccggaggaggcagcagtttcatgtatcctgtcggaggaggc
ctgggacctccacaaggcatggtacccatgcagcagcagcagcagcaacagcaacaacag
cagggcttccctatggtcatgcagccgaacatgcagggcatgatgggaatgaactttgga
gggcagatgcctccgggagcgatgcctatgcagggtgggatggccatcgggatgcagacc
cctgggatgcagttcttgggtcagccacagtttatgggtatgagacctcctggacctcag
tacacagctgacatgcagaaacaaatggcggaggagcatcaaaaacgtctggagcagcag
cagaagatgctggaggaggacaggaaaagacgacagtttgaggagcagaaacagaagctg
aggctgctcagcagtgtcaaacccaaaacaggagaaaagagccgcgatgatgccttggag
gcgatcaaaggcaacctggatggcttcagcagagacgcgaagatgcacccgactccgtca
tcacagacaaagaagccagactcatcgccatcacacccgtctgtcaccactcactccctt
ccccaagctttgtccgaggacaatgacgagtttagtgactttcaggggcctttagacgcc
cccgcctccttccctgcgccctcctcctcctgctcctcctcctccacttcctccaccttc
ggcctctcctctcaggcccacgtccagccttcgtcctctgcccccaagacaggtttctct
gaggaggatgatgacttttctgactttgttcagggtcctgttaatgctttccctgcctcc
aacctccacctctcctcccaggcccaagtccaaccttcatccccttccctgtgggcaggt
atgcccccctcttcctcctccctccctcagtccctccctctcactgtcacccagcactct
gctgtcaacaccagctcccaatctacatttcaaggcccgtccttggaagagaagctattc
tcctcgtgcgatctcactgctgataagacggcccagattagctttaggcctaagcagagt
ttggctaaaatgggtcctagagctaaagtttcaacccagtttcaatccagcactaaatcc
aggaactgggctgcggcccccgaggacttgagttctgtcttcgtcgctgaaaagctacct
gaggcccccgtgtcggcacccagcgtccccccatcagctcctgactcgcctcctcaaagc
agtagtgacagtgcaggtgttggcgtgtacccacaaacagagcacatccagcccatgctg
ccaggctggatttataacgacagccttgttccagaaatgttcaagaaggttcttgaattc
accatgactccggcagggatcgacacagccaaactctacccaatactaatgtcatcaggt
cttcccagggaagcgctggggcaaatctgggcgtcagccaaccgcacaacacctggcatg
ctgaccaaggaggagctctacactgtacttgcactaattggcgtggcacagagtggcctc
ccggcaatgaatgtggaaatcctcagtcagttcccttctccaccagtgcccaacctgccg
gccttggctatggccatggcccccgtcatgccccagcaccagcaacccatgatgaccaag
cccccggtctccatgtccatgtccatgcccacaccagcaccaccagtcatggccatgacc
cccgcagcaccggttcaagctcccacaaacaccaacttcgtcgccagtttccctcctgcg
caggcgaccaaagccgatgacgacgacttccaggatttccaggaggctccaaagcctgga
gcaggagaccaggccttcaccgagttccagggggagtcaggtggaagtttccccaccacc
atcgcacctcagcaccaaaacagtgcgcctgccatgctgactccggtctctggttcctcc
tccgcttccgtcacgtcctctgataagtacgccgtcttcaagcagttgtctgtggatccg
cctgcggagcctacaccccccgcctcagatattggagacaaatacagtgtgttcagacag
ctcgagcaacccgctgaaaagaaaccagttggagaaggatttgcagatttcaagtctgtc
agcgctgatgatggcttcacagactttaaaaccgccaacagcatctctcctctagaccct
tcagaacaggccaagatctttcagcctacctttcctcctgcttttccaaactctcagtct
ctacaacatctaccgcagcagcaacagcaacagccagcagtgtctctttctcagcccaaa
aatcctctcaacatggccgacctgaaccttttctcttctatagctccctctgctcctgcc
cccactgagacaaaacccagcacattcccctcggtgtccgtgcccccttctctagtgctc
ctacccggtggtgccaaacctccagggggaggtgcagatgattttggtgactttgccctc
tttggctcttcctctgatgctgctcaagcttcggcagcaggaggagctgtggcggcacct
caggacgactttgcagacttcatggcgtttggtagttctggcggggagcccaaaggcgag
agcagcagtgtgggtgtccagggggagacctccactcagcagcgacctcagcagagctca
gacaagtacgacgtattcaaacagctctctctggagggaggcctggcctacgatgacaca
aaggagagcggcggtggctccttctcttctctcaagagcgacacagacgactttgctgac
tttcagtcctcgaagttctgcacggccctcggggcgtcggaaaagacactggtggacaaa
gtggccgctttcaagcaggccaaagaggactccgcctctgtcaagtccctcgacctcccg
tccatcggggggagcagcgtaggaaaggacgactccgaggacgcactctcagtgcagctg
gacatgaagctctcggacatgggcggagacctgaaacacgtgatgtcggacagctctctg
gatttgccgggtctctcggcccaccagccccccgctacagaagcagacgacatgaaattt
gacccctttgggacgtcgggcctcagcaccctgaccagctatgactggtcagaccgggag
gaatgtctacccggtgaggtcagaaagccacagggctcagagggagcttcccttccgtct
ttagtgccaacacagaggaaggagctgacctttggaagcactgaaaacatcacaagcagc
tccgtagcgaagatcatcacctccttccccgcagaggacgtctcatcgaccgatgacaag
ttcgaaccctttgctgattttggctccggcgatcagggcagtgtcgacgtcgaggacgac
ttcggggactttgcgagtactgtttccgagaagtccgactcgcccgccgccaccgctgag
acgggctccgaggaggcctctgatgagtttggagccttccagggagacaagcctaagttt
ggaaagtctgacttcctgaaagccagcgctcaggccaaagtcaagtccagcgaggagatg
atcaagaacgaactggcaacctttgatttgtgtgttcaaggctcccacaaacgcagtcac
agtttgggtgacaaggagattgggcgttcgcccccgtctccggctccagagcaggccttc
agagaccgatccaacaccctgagcgagaagcccgccctgcctgtcatcagggacaaatac
aaggacctgacaggggaggtggaggagagcgagcgctacgcgtacgagtggcaaaggtgt
ctggaaaatgccctggaggtcatcaccaaagccaacaacatcctgaacggcatcagcagc
tcctccgtctgcaccgaggtcatccagtctgctcagggcatggagtacctgctgggcgtg
gtggaagtgtatcgtgtcacccggcgcgtggagctgggcatcaaagcgacggccgtgtgc
tcggggaagctgcagcagctgctgaaggacatcagccgcgtgtggaacaacctcatgggc
ttcatgtcgctggccaagctcgctcctgatgaaagctccctcgatttctcctcctgtatt
ctgagacacggcattaagaacgccaaggagttggcttgtggggtgtgtctgctcaacgtt
gacgctcgcagcaagaacaaagaagaaagcgctattggacgtctgtttaaacgagcgttc
aactcggagacggacaacttcaagctgctgtacgggggccaccagtaccacgccagctgt
gccaatttctggattaactgtgtggagcccaaacccccgggcctcatactgcctgacctg
ctctga
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