Larimichthys crocea (large yellow croaker): 104923546
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Entry
104923546 CDS
T04659
Symbol
samd4b
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104923546 (samd4b)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104923546 (samd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
104923546
NCBI-ProteinID:
XP_010734981
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All DBs
Position
VII:21015614..21027854
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AA seq
677 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHILEA
EANNAAIVSQWHQEPKEKVVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYAPRAPSSPYHPRQGSDEWPSSA
EALDPGHAWHDKSPSSSTSPAGQNGHMPFPGGMSSPINSNNTGLAGQMQPSPLKKSMSVI
PSSPQACGSDWISQDDAGGRQNFISTDHAPLSPQSSVASSGSEQTEEQGSRNTFQEDGSG
MKDVPAWLKSLRLHKYASLFSQMTYEEMMILTEQHLESQNVTKGARHKIALSIQKLRERQ
SVLKSLEKDILEGGNLRNALQELQQIIITPIKAYSPPSAAQTAPDTATTPETASSSEATK
TGADKEPGSESFQSHNPPPCDGDSPATPISDGDIAGQFTRVMGKVCTQLLVSRPDEENIS
CYLQLIEKCLIHEAFSETHKKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWTYGSNSL
PTAGSVSGGVARRGQRQFQMTPRGLPAGRMGLLSPSGIGGASPRHTLTSPALAGQGRQNL
WFANPGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLMFQQQECQVPGADLEINPTLESLCL
SMTEHALGDGTDRTSTI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtaggtatcctcacagattggttcaagggctggaatgagtgt
gaacagacggtggcactgttgtccctcttgaagagggtgtcgcgcacccaagctcgcttc
ttacacatctgccttgaacactggctggcagactgcacagagatccacatcctagaagct
gaggccaacaatgcagcaattgtcagccagtggcatcaggagccaaaggagaaggttgtg
tccttgctgctgtcccatctgcctctgctgcagccgcggaacagcgaggccaaatgtgag
tacatgaagctgcttcagaaggtgttgagtcacactatcgagagtagcctgtttgtggaa
gaaagcagacagctgctctcctacgctctcatccaccctgccaccacactggatgaccgc
acctctctggccatgtggctaaaccacctggaggaacacctatctagtggctatgcaccc
agggccccatctagcccttaccacccgcgccaggggtcagatgaatggcccagctctgct
gaggctctggaccctggccacgcctggcacgacaagtccccttcatctagcacgtctccc
gcaggccagaacggacacatgcctttcccaggcgggatgtcttctccgatcaacagcaat
aacacaggtctggctggacagatgcagccgagccctctaaagaagtccatgtccgttata
ccttccagtccccaggcatgtggctctgactggattagccaggatgacgcagggggcaga
cagaacttcatttcaacagatcacgcacccctttcaccccagagcagcgtagcctcctca
ggcagcgagcagacagaagaacagggcagccgcaacacgttccaggaggatggcagtggc
atgaaagatgttcccgcatggttaaagagtctccgccttcataaatatgcatcacttttc
tcccagatgacctacgaggagatgatgattcttacagagcagcacctggagtcgcagaac
gtcaccaaaggagcacggcataagattgctttgagtatccagaaactgcgagagaggcag
agtgtgctcaagtctttagaaaaggatattttggaagggggaaacctgcgtaacgccctc
caagagctgcaacagatcatcatcacacccatcaaggcctacagcccacccagtgcagca
cagactgccccggacacagccaccactccggaaacagcctcctcttctgaagctacaaaa
acaggagcagacaaagagccgggctcagagagcttccagtcccacaacccacctccctgc
gatggagactccccagccacacccatctcagacggcgacattgctggacagttcacccgc
gtcatgggcaaagtgtgcacccagctgcttgtgtcaagaccagatgaggagaatatcagc
tgttaccttcagctcattgagaagtgtctgatacacgaggctttctcagaaactcacaag
aaaaggctggtctcctggaagcagcaggtcctgaaactgctccgcctgttccctcggaaa
gctatgctggacatgcctgtgtaccgacagaaaggctggacctatgggtccaactccctc
cccacagcaggatctgtgagcggaggtgtagcgcggcggggccagaggcagttccagatg
accccccgtggactcccagccgggcgcatgggtcttctcagtcccagcgggatcggggga
gcatctccacgccacacactcactagtcctgcgctggcaggccagggtagacaaaacctg
tggtttgccaaccctgggggcagtaacagcatgccaagtcagagtcgcagctccgtgcag
cggacccactcactccctgtccacacttccccacaaaccatgctcatgttccagcagcaa
gaatgccaagttccaggtgctgacctggagatcaaccccacgctggagtcactgtgcctc
agtatgacagagcatgccttaggggatggaacagaccggacgtcaacaatatga
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