Larimichthys crocea (large yellow croaker): 104923804
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Entry
104923804 CDS
T04659
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104923804
04020 Calcium signaling pathway
104923804
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104923804
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104923804
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
104923804
NCBI-ProteinID:
XP_027133978
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All DBs
Position
III:51023446..51144628
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AA seq
2410 aa
AA seq
DB search
MARFEDELSSRYGGTCPAGPARGASRQPGPPGVQRMYKQTMAQRARTMAIYNPIPVKQSC
LTVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPALDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRTCFKIDTGEQAADFPCGLEAPARTCYNGTTCKEYWIGPSFGITNFDNILFAVLTVFQ
CITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKSAEEKSLDGAWYKRKNNNSVLKRT
KKSKNDLINAEEGEDHFTDISSVGSPFARASVKSKNESSSYFRRKEKRIRFTIRRLVKSQ
SFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLAEMSMKMYGLGPQNYF
HSSFNCFDFGVIIGSIFEVIWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSL
LNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTG
EDWNAVMYHGIESQGGVHGGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE
EEQEEAINKKLALQKAKEVKEVSPMSAANISITAFLTRSRGNAHSSSSSICSVNSLSYVC
TPVHHYLSKEQQKSMKTMSVWEHRANQLRRQNRASCEALYCELEPEERLRLSTALHIRPD
MKTHLDRPLVVEPHDGPLLGGHQHHHHKPCMPEEAETAADPLPPSVPHQPRRHHRHRDRA
RVREETNDNGDTSKDGGHHVHHSRSKDHDGSRGKEGKSERSHSREGGRRHHHQSSVDDSG
GGGVTNEREHRHHHSHRQSRGGNGTVNSGGKGERRSRHRDGRSSNRDGDKNSKGESGANG
ARRRHRNHGSRGQSAVEGEESNGREKTHSNRDRFGDSEGESLATSPQQDSGGANWPPDRP
EDSDNQRNVRRTGQTSIQIPPVTVTSPPGETTLIQLNSIDCETMPMNEKTLEDLGQSGPK
PILPYRSMFMFGQTNPVRRLCHYIVTLRYFEMSILVVIAMSSIALAAEDPVWTNAPRNNV
LKYLDYAFTGVFTFEMVIKMVDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGR
SQQGVTRGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYI
LFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCKGQFLDYDKDEVAAMPREWKKYEFHYDN
VLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFPFFFVNI
FVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPENTQSFQYRMWKFVVS
APFEYSIMIMIALNTVVLMMKFHGAPDFYEAMLKNLNIVFTTLFSLECILKIIAFGPLNY
LKDAWNVFDFVTVLGSITDILVTEINTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLW
TFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNEDTAINHHNNFRTFLQALMLLFR
SATGEAWHEIMLSCLSHRACDERSGSHGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIM
DNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYQMLLHMSPPLGLGKKCPP
RVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELSTVW
PSLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRARRLQLQQQQQQSASGSQCKV
GALFKPLLPLTHMQEKDLPMVLNSVEPPSMLQPQSKSHAKSQPQTRPSSNSLNNGGTLPG
HDHIKASSSWVMEKPKEVPRAKTKRTMSRGPSDDTPDTTVIQESVEMRKMETSASSTIPA
PSSGLENQGRAASMPRLNTDLQRSHSRHSPGIHLASVPDASPMKRSASTVAPQRPQEVNL
RDYTLEKPSQDRPHHHHHHHRCHHRRDRDKERDREKRQRSLDTPLGGQPPSSAGAPGEPA
SDPAATRERVHDRGRSHERKHHHSSADKQRYYSCDRYCSREHCQTKSATASCAASPSEGQ
ETSNKQGSGWVKGSPVALSSSSSTPSRGRRQLPQTPLTPRPGVAYKTANSSPVHFVSSQA
SLSPGRLSRGLSEHNALRHSGSRHFPCPVTRISSEPFLGQGHDEALGSLYGSLWDQLDVF
QDAASLTPSPRVRHSSRTALPRMMGALLPAPQQNLGVPNGYHFSFGGSTSPGSGVRAPRY
YQEAEEDEWC
NT seq
7233 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttgaagacgaactgtccagccgctatggaggcacctgtcccgcgggccct
gccagaggggccagccggcagccggggcctccaggggtacagaggatgtacaagcagacg
atggcccagagagccaggaccatggccatttacaaccccatccccgtcaaacagagctgc
ctcaccgttaaccgctccttgttcatcttcagtgaggataatatcatacggaaatatgcc
aaaaagatcaccgaatggcctccatttgagtacatgatcctggccaccattatagcaaac
tgcatcgtgctggccttggagcaacacctaccggccttagacaaaacaccgatgtcagag
cgtttggacgacacagagccctactttattggaatattttgttttgaggctggcatcaag
atcatcgccctgggctttgcctttcacaaaggctcctacctgcgtaatggctggaatgta
atggactttgtagtggtcctaacagggatcctggccactgtggggactgacttcgatcta
agaacactgagggcggtgagagtactacggccgctcaaactggtttccggcattccaagt
ctccaggtggtattgaagtctattatgaaagccatggtacctttgctccagatcggcctg
ctgctcttcttcgccatcctcatgttcgccatcatcggcctcgatttctacatgggcaag
ttccatcgcacctgcttcaagatagacacgggtgagcaggcagcagatttcccctgtggc
ctggaggccccggcgaggacctgttacaacggcaccacctgtaaggagtactggattgga
cccagctttggcatcaccaactttgacaatatcctcttcgctgttctcactgttttccag
tgcatcaccatggagggatgggtggatatcctctacaacgccaacgatgcctcggggaac
acgtggaactggctgtacttcatccccctcatcatcatcggctccttcttcatgctcaac
ctggtgctcggtgtgctgtcaggtgagtttgccaaggagagggagcgggtggaaaagagg
caagaattcctgaagctccgtagacaacagcaaatagagagagagttaactggctacctg
gagtggatctgcaaagcagaggaggtgatgctggctgaggaggacaagagcgcagaggag
aaatctctggatggagcgtggtacaaaaggaaaaacaacaactctgtgctgaagaggacc
aagaagagtaagaatgacctcatcaatgcagaggaaggcgaggaccacttcactgacatc
tcatctgttgggtcgccgttcgcccgggccagtgtaaaaagcaagaacgagagctcctcg
tacttcaggaggaaagagaagaggattcgctttaccatccgccgtctggtcaaatcccag
agcttctactggactgtgttgtgtctggttggcctcaacacgctgtgtgtagccatcgta
cactatgaccagcccgagtggctcacctatgcactatacctggccgagtttgtattcctg
ggcctgttcctggcagagatgtccatgaaaatgtacggcctcggaccccagaactacttc
cactcctctttcaactgttttgactttggggtgataattggcagtatttttgaggtgatc
tgggctgccatcaaacccggggcctcatttgggatcagtgtcctgcgggctctgagactg
ctcaggatctttaaagtcaccaagtactggaactctttgaggaatctggtggtatccctc
ctcaactccatgaagtctatcatcagcctgttgttcctactcttcctcttcatcgtggtc
ttcgctctgctgggcatgcagctgtttggtggccagtttaatttcgaagacgaaacgccg
acaaccaactttgacacattcccagcagccattctcaccgtcttccagatcctaaccggg
gaggactggaacgcagtcatgtaccacgggatcgaatcacagggaggcgttcacggggga
atgttctcctccatttatttcattgttctcactctctttggaaactacacactcctcaac
gtgttcttggccatcgctgttgataaccttgcaaatgcccaggaacttactaaggatgaa
gaggagcaagaggaggccatcaataaaaagcttgcgctccagaaggccaaggaggtaaag
gaggtcagccccatgtcggccgctaacatctccatcacagcttttctaacacgcagtcga
ggtaacgcgcactctagcagctcatccatctgcagcgttaactcactgagttatgtctgc
accccagtccatcactacttgagtaaggagcagcagaagtcaatgaagacaatgtcggtg
tgggagcacagggccaaccagctgaggaggcagaaccgggcgagctgcgaggccctctac
tgtgagctggagcctgaggagcgtctccgcctgtccacggccctccacattcggcccgat
atgaagacccaccttgacaggccgcttgttgttgagcctcacgatggtcccttgctgggc
ggccaccaacaccatcatcacaagccctgcatgccagaggaggctgagactgccgctgac
cctcttccaccttctgtgcctcaccagccccgacgccaccaccgtcacagagacagggcc
agggttagagaggagacaaatgataatggcgacaccagtaaagacgggggccaccacgtc
catcacagccgctccaaagaccacgacggcagccgtggaaaagagggaaagagtgagagg
tcccacagccgagagggaggcaggaggcatcaccatcagagctcagtggacgacagtgga
ggtggaggagtcacgaatgagagagagcatcgccatcatcattcacaccgacagtcccga
gggggcaacgggactgtgaacagcggaggcaagggagagcgtagatcccgccacagagat
ggacgttcatctaacagggacggggataagaattccaaaggagaaagtggtgccaacgga
gcaaggagaagacatcggaatcatggatctaggggtcagtctgcagttgaaggagaggag
tccaacgggagagagaagacccacagtaacagggacaggtttggtgactcagagggggag
tccctcgccacctccccccagcaggactctgggggggccaactggcctcctgaccgacca
gaggactcagacaaccagcggaatgtcagacgaactggccaaacttccatccaaattcct
cctgtgaccgtcacctccccgccaggagagaccacactcatacaactgaatagcattgac
tgtgagacaatgcccatgaatgagaagaccctggaggatctaggtcaaagtggacccaaa
cccatcctgccttacaggtccatgttcatgtttggacaaaccaacccggtgagacggtta
tgccactacattgtgactctgcgttatttcgagatgtccatcctggttgtcattgctatg
agcagtatcgctctggcagcagaggaccctgtctggactaatgcccctcgaaacaatgtg
ctcaaatatctggactacgccttcactggtgtttttacttttgaaatggtgattaagatg
gtggacctgggtctgctgcttcatcctggagcctacttcagagacctatggaacattctg
gacttcatagtggtcagtggggcgctggtggcttttgcattttcgagcttcatgggtaga
tcgcaacaaggtgtgaccagggggaccaaaggcaaagacatcagcactatcaagtctctg
agggttctccgtgtgctcaggcctctcaagaccatcaaacgtctaccaaaactaaaggcg
gtgttcgactgtgtggtcaactctttgaagaacgtgctgaacatcctcatcgtttacatc
ctcttcatgttcatctttgctgtcatcgcagttcagctctttaagggaaaattcttctac
tgcacagacgagtccaagggcctggagaaggactgcaaaggacagttcctagactacgac
aaagacgaggtggccgccatgcccagagagtggaagaaatatgagttccactacgacaac
gtgctgtgggccttcctgaccctcttcactgtctccacaggggaaggctggccgactgtc
ttgaagcactctgtggatgccacctttgaagaccagggtcccagtccaggctaccggata
gaaatgtccatcttctatgtggtctactttgtggtcttccctttcttcttcgtcaacatc
tttgtcgccctgatcatcatcaccttccaggagcagggagacaaggctctgtcagagtgc
agcttggaaaagaacgagagggcttgtattgactttgccataaacgccaaacccctgaca
cgctacatgcccgagaacacgcagtctttccagtacaggatgtggaagtttgtggtctca
gctccttttgaatactccatcatgatcatgatcgctctcaacactgtggtactcatgatg
aagttccatggagctccagacttctatgaagcaatgctaaagaacctcaacatagtcttc
accactctcttctctctggagtgtatcctcaagattattgcttttggtccactgaattac
ctgaaggacgcctggaacgtgtttgactttgtcaccgtgttgggcagcatcactgacatc
ctggtgactgaaatcaatactacggacaggctgctgaacttgagcttcctcaggctgttc
agggctgctcggctcatcaagcttctgaggcagggttacaccatccgcatcctgctgtgg
accttcgtccagtcctttaaggccctgccttatgtctgcctgctgattgccatgctgttc
ttcatttatgccattattgggatgcaggtgtttggcaacattgatctgaacgaggacaca
gctatcaatcaccacaacaacttccgcactttcctccaggctctcatgctactgttcagg
agtgcaaccggtgaggcctggcacgagatcatgttatcatgtttgagtcacagagcctgt
gacgagcgatcggggtcccatgggaaggagtgcggcagtgattttgcctacttctacttt
gtctccttcatcttcctctgctccttcctgatgctgaacctgtttgtggctgtcataatg
gataactttgagtacctaaccagagactcctccattctggggcctcatcacctcgatgag
ttcatccgggtttgggccgagtatgacccagctgcatgtggccgtatcaagtacctcgat
atgtatcagatgctgctccacatgtccccacccttaggtttgggaaagaaatgtccacca
agagtcgcctacaagcgccttgtcaaaatgaacatgcccatcgctgacgacaacactgtc
cacttcacctccaccctgatggccctgattcgcactgccctggagatcaaactggcctca
ggcatggtagcccagcgattatctgacgctgagttaaaaaaggagttgtccacagtgtgg
cccagcctctcccaaaagaccatggacctgttggtgacaccacataaacccaatgaactg
acagtagggaaggtttatgcggccctgatgatctttgactactataagcagaaccgagcg
aggaggctgcaactgcagcagcagcagcaacagagcgcgtcaggctctcagtgcaaggtc
ggggctctgtttaagccattgctgcctctgactcacatgcaggagaaagatctgcctatg
gtgttaaacagtgtggagcctcccagcatgcttcagccccagtccaaatcccatgccaag
tcccagccacagaccagacctagctccaactccctcaacaatggaggcacactgccaggt
catgatcacatcaaggcatcatcttcttgggtgatggagaaacccaaggaagtgccccga
gctaagactaagagaaccatgtccaggggcccatcggacgacacaccggacactactgtt
attcaggagtcggtggaaatgaggaagatggagactagtgccagcagtacaatcccagcc
cctagctcaggtttggaaaaccagggcagagctgcttctatgcctcgacttaatactgac
ctgcagcggagccactcacgccactctccaggaatccatctagcttctgtacctgatgcc
agccctatgaagcgctcagcttccactgtggccccacagcggccccaggaggtcaacctg
agggactacaccttggagaaacccagtcaggatcgaccccaccatcatcaccatcaccac
cgctgccaccaccgcagagacagagataaagaaagagacagagagaagaggcagaggtct
ttggacacaccactgggtggacaaccacctagctctgctggtgcaccaggagaaccagcg
tctgacccagctgcaaccagagagcgagtgcatgaccgtggacgctcccacgagaggaaa
caccaccactcctcggcggacaagcagcgttactactcctgcgaccgttactgcagccgg
gaacactgccaaaccaaatctgccaccgccagctgtgccgcctcccccagtgaggggcag
gaaaccagcaacaagcagggcagtggttgggttaaaggcagcccagtggcactgagctcc
agttctagcacgccaagccgcggacgacggcagctcccccagacccccctcaccccgcgg
cccggggtggcctacaagactgccaattcatcccccgtccactttgtgtccagccaggcc
tctctgagtcctggccggctgagccgcggcctgtcggagcacaacgccctccggcacagc
ggctcccgccacttcccctgccccgtcactcgtatcagctctgagcccttcctgggccag
ggtcacgacgaggccctgggcagcctctacggcagcctctgggaccagctggacgtcttc
caggatgcggcgtcactgacgccgagcccccgtgtcagacactcatctcggactgcactg
cctcgcatgatgggagccctgcttcctgctccgcagcagaaccttggggtgccaaacggg
taccacttcagctttggaggcagcaccagcccaggctctggcgtcagggcacccaggtat
taccaggaggcagaggaggacgaatggtgctag
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