Larimichthys crocea (large yellow croaker): 104923807
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Entry
104923807 CDS
T04659
Symbol
scaf4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104923807 (scaf4)
03041 Spliceosome [BR:
lco03041
]
104923807 (scaf4)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104923807 (scaf4)
Spliceosome [BR:
lco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
104923807 (scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104923807
NCBI-ProteinID:
XP_010735295
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All DBs
Position
XXII:complement(7125311..7136490)
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AA seq
1108 aa
AA seq
DB search
MDAVNAFNHELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV
AGLYVVDSIVRQSRHQFGADKDVFGPRFTKNIMGTFENLCLCPVEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSSSAAAPYTGTDEPGSSPPPAKEPVTAVTANSTTATSAAQLQN
SDAFAAVAQLFQTSQGQQLQQMLQNFQQQPVKPDTNTQPPAHNIQTQAQNVATGLGMVAP
QPPLPTQPTQQKTAFDKKLLDRFDYDDEPEVGEEAKKDELSSQPSFLQQPPAFLQQMEHF
KPQMMNMSQDPSQQVPLPPNGQLQAYGLPPGQSFPVMMPPMGHALPGQPLPGSTGPPGFP
GVYPPHSAAQQQDLSMDMDRSSMRDGRHGRRSHSGSRSPKRRRSRSNSRTRRSRHRRSRS
RSRDRRHHSPRSRSQERREREKERERRQKGLPPPKSETLSICSTTLWVGQLDKRTQQQDV
ACLLEEFGQIESINMIPPRGCAYIVMIHRQDAFRALQKLSRGSHKVNQKAIKIAWALNKG
IKAEFKQYWDVELGVTYIPWSKIREVQLEELKEGGILDVDTLSPEWSGVRKSLDLPEELT
HNGRSEPQQPEETQVIPVASAAPPLAQVPPMQQPMVGVGSLQPPVFPGPIGMPPPSFPPG
VPPPPFIRPGFNPMQMPPGFPPPGAMPLGPPPPSKGGAEDLSLDPAGLGNRKNDEVLESP
NIFNNQMAPMGNQVGAPPSSLPCGPPANLQPPSGGLLGARPGLIPLQRPPVPPPPHMQRF
LPPLGPRPPHPNMPPMPPQMMPRGPHPQMMHHDTPPPKGSFGMLPLHNLRAPFPPHGHGP
PPPFVRPGVPRGPEVPEETDGRQFRGDRPGFRDREPERDRDWDRDRDRERDRGFGGGRRP
FGEGGRGGGSERMDGRDRLGGWQEDGGDHRGGGWERDRDRDRDRDRDRDRDRDRRDWRER
RSSLDSDRERGRGDDGERERGRGEGGERGRGGGGSRERERGRGAEGDRPRRSERRERTTR
WDRDDRLAELENVDRFRTSNSTEQPCLTPVATAETSKEPSVEVSQKKAESELLAPPPEVT
TAAGEPTPSEPLPPAQSEPTETKQDAAS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgcctttaaccacgagttattctcattgatggactccaagcccccg
atatctcgggcgaagatgatctccatcaccaaatcagccatcaaagctatgaaactctac
aaacatgtggtccagattgtggagaagtttatcaaaaagtgtaagcctgagtacaaggta
gcaggcctgtatgtggtggattccattgttcggcagtccagacatcagtttggagcagac
aaagacgtgtttggcccaaggttcactaaaaacattatgggaacctttgagaacctctgc
ctttgtccagtggaggacaggagtaagattgtacgagtgttaaacctgtggcagaagaat
ggagtcttcaagattgaggtcatccagcccctcctggacatggcagctggttccagcagt
gctgctgcgccctacacaggcactgatgagccaggttcttcccctcctccagccaaagag
ccagtcactgcagtaacggcgaactccaccaccgcgacgtctgctgctcagctgcaaaac
tccgacgcctttgctgctgtggcacagctcttccagacctcacagggtcagcagcttcaa
cagatgctccagaactttcagcagcaaccagtgaagcctgacaccaacacacagcctcct
gcgcacaacattcaaacgcaggcccaaaacgtcgccactggcctgggcatggtcgccccg
caacctcccctacccactcaacccacacagcagaagacagcctttgacaagaaactgctg
gaccgtttcgactacgatgacgaaccagaagttggggaagaagcaaagaaggatgaactc
tcatcacagccctcgtttttgcagcagccgccagccttcctacagcagatggagcacttt
aaaccacaaatgatgaacatgtcgcaagacccctcacaacaggttcctctccctcccaac
ggccagctccaggcctatggtttaccgccaggacaaagcttcccagttatgatgcctcct
atggggcatgctttgccagggcagcccctccctggatctactgggcctccaggcttccct
ggagtataccctccccacagtgccgcacagcaacaggatttgtcaatggatatggaccgt
tcatctatgagggatggcagacatggtcgacggtcacactcaggctccaggtctccaaag
cggaggaggtcgcggtctaattcccgcacacggagatccaggcacaggcgctcccgctcg
cgctccagggaccgccgtcaccattctccacgctctcgctcgcaggagcgcagggagaga
gagaaggagcgagagcgacggcagaaaggccttccacctcccaagagcgaaacactaagc
atctgtagtacaactctctgggtgggtcagctggacaaaagaacacaacaacaagatgtt
gcctgtttactggaggagtttggacagatagagtccatcaatatgatccctccacgtggt
tgcgcctacatcgtcatgatacatagacaagatgccttcagggctctccagaaacttagc
agaggatctcacaaagtgaaccagaaagccatcaagattgcttgggctttgaacaagggc
ataaaggctgagtttaaacagtactgggacgtggagctgggcgtcacctacataccttgg
tctaaaatccgagaagttcagttggaggagctgaaagaaggaggcatactggatgtagac
accttatcaccagagtggagtggggtgaggaagagtcttgaccttccagaggaactcacc
cacaacggtcgttcagagccacagcagcctgaggagactcaagtaatacccgtggcttct
gcagctcctcctcttgctcaggttcctcccatgcagcagcccatggttggtgtgggttct
ctccagcctcctgtctttcctggtcccataggcatgcctccgccttccttccctccaggc
gtccctcctcctcctttcatcagacctggcttcaatcccatgcagatgcctccaggtttt
cctccaccaggtgccatgcctctaggtcccccacctccttccaaaggtggagctgaagac
ctgtctctggacccagcaggtctgggcaacaggaaaaatgacgaggtcctggagagtcca
aacatcttcaacaaccagatggcacctatgggtaaccaggttggtgcacctccaagttct
ctcccatgtggtcctccagcaaacctccaacctccctctggtggtctgctcggcgcacgg
cccggtttaatcccactccagcgtcccccggttcccccaccaccacacatgcagcgtttc
cttccaccccttgggccacgaccccctcaccccaacatgccacccatgccaccacagatg
atgcccagagggccacaccctcagatgatgcaccatgacacccctccacctaaaggaagc
tttgggatgctccctctccataatttaagggctccttttcctccacatgggcacggccct
cctcctccatttgtcaggccaggtgttcctcgcggccccgaggtgccagaggagacggat
ggcaggcaattcaggggagacaggcctggattcagagaccgagagccagaaagggacaga
gactgggatcgagacagggatagagaaagagaccgaggatttgggggtggaaggcgtcca
tttggtgaaggagggagagggggaggtagcgaaagaatggatgggagggacaggctcgga
ggctggcaggaagatggtggtgatcaccggggaggaggatgggagcgagacagagatcgg
gacagagatcgagacagagaccgcgatcgggacagagacagacgggactggagggagaga
cgaagcagcctggatagcgacagggaacgagggaggggcgatgatggcgagagggagcga
gggagaggggagggaggagaaaggggaaggggaggaggcgggagtcgagagagagagagg
gggagaggagctgaaggggacaggccaaggcggtcggagcggcgagaaaggaccacgcga
tgggacagagacgatcgattggctgagctggaaaacgtggacagatttcggacctcaaac
agcacagagcaaccgtgtttgactcctgtggccaccgcggaaaccagtaaagaaccaagt
gtggaagtttctcaaaagaaggctgaatcagaacttttagctccgcccccagaggtgact
actgctgcaggagagccgacgccctccgagcccttacctccagctcaaagtgagcccaca
gaaacaaaacaggacgcagcatcatag
DBGET
integrated database retrieval system
