Larimichthys crocea (large yellow croaker): 104923885
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Entry
104923885 CDS
T04659
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104923885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104923885
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
104923885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Prokineticin
Motif
Other DBs
NCBI-GeneID:
104923885
NCBI-ProteinID:
XP_019123558
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All DBs
Position
XVI:complement(15123723..15186948)
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AA seq
1484 aa
AA seq
DB search
MSVMAVCVWAAAPLLFLGLCLCSVGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSDGHWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSKRRDMTVFSHTFMGGVTPDLHSSPLRLTSPSVREHPA
FHGWITAVSINGSLVMLDSSEGVTVTAGCGPDHQCQNGGVCSVVNDQAVCDCSDTGYQGN
DCSEEHSYTPGLAHLMIGDQAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQR
NGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLR
QHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGC
LKEVVYKNNDVRLELSRLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESFVALSKWT
AKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPTIKVDFFAIEMLDGHLYLLLD
MGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDDTLYL
GGLPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPSCSRE
PPKQCLSNPCQHNGICREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQLPVAM
HTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTTSKGP
ETIFAGSGLNDNEWHTVRVVRRGKSLKLTVDDLQPVEGQMAGDHTQLEFHNVETGIVTEK
RFMPAVPSNFIGHLQGLALNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPVTFRSRSSF
VTLPTLQAYYSMHLFMQFKTTSPDGLILYNRGDGNDFIVVELVKGYLHYISDLGNGAHLI
KGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYIGGISKEM
YRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATMGQVERGCEGPSTTCQEDSCSNQ
GVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGVVVYTWPPNERPSTRADRLALG
FSTQQKHAILLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKFVNDGKYHII
RFTRSGGNATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTI
FNSQTTVRVGGGERSAGMFQGQLSGLYYNGLRILNMAAEGHPHIKVEGSARLVGDMPSSS
ITPQSSAAAGGNRSDSAPSISDITTTTATNRKQGTTQQSADDLLVASAECPSDDEDIDPC
DPSSARPPLPEVKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGS
YHVDESRNYISNSATQPNGSTKDKPLGITKISKNKKNKDKEYYV
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatggcggtgtgtgtttgggcggcagcccccctgctcttcttggggctgtgc
ctgtgcagcgtggggggccaggcccaaggggaggtgctggaattcggaggtgtgtccagc
cagtgggggcggtttccagtgtggaacgcctgctgcgagagtgtgctgagcttcagcctg
cggactcacagccaggagggcctgctgctctacctggatgatgagggcttctgcgacttc
ctggagctgctgcttctccacggccacctccgcctgcgcttctccatcttctgtgctgag
ccggccgagctacagtcaggcgtggcggtcagtgacgggcactggcacgcagtgcgtgtc
aagagggactggaggaacacctcgctggaggtggacgggcgactggaaggatgggcggaa
gtgaagagcaagagaagagacatgacagtattcagccacaccttcatgggcggggtgacg
ccagatctacactcctcgccattgcgcctcacatccccttcggtacgggaacacccagcc
ttccatggctggatcacggcggttagcatcaatggctcgttggtgatgctggacagctca
gagggcgtcacggtaacagctggctgtgggccggatcaccagtgccagaacggaggggtg
tgcagcgtggtcaacgaccaggccgtctgcgactgctccgacaccggttaccaaggcaac
gactgcagcgaagagcacagctacactccaggtctggcacacctgatgattggcgaccaa
gctcgtgaggagtacgttgccaccttcaagggctctgagtacttctgctatgacctatcg
cccaaccccatccagtctagcagcgatgaaatcacgctctccttcaagacgctgcagcgc
aacggcctgatgctgcacactggcaagtcagccgactacgtcaacctggcactgaagaac
ggtgccgtatcgcttgtcatcaatctcggctccggggccttcgaggccttggtggagccc
gtcaacggcaagttcaacgacaacgcctggcacgacgtcaaggtcacccgcaacctgaga
cagcactcaggcattggacacgctatggtgacgatctccgtggacggcatcctgaccacc
acgggctacacccaggaggactacaccatgctgggctcagacgacttcttctacgtggga
gggagcccaagcacagctgatctgcccggctctccagtcagcaataacttcatgggatgt
cttaaagaggttgtgtacaagaacaatgacgtacgattggagctgtctagactggctaaa
cagggagacccaaagatgaaggtaagcggggtggtgtccttcaagtgtgagagtgtggcc
acgttggaccccgtaacctttgacaccccggagtcttttgtggcgttgagcaaatggaca
gcgaagaaggcgggatcgatctcattcgacttcaggaccacagagccgaacgggttgatg
cttttcagccatggcaaaccccgacagcagcaacgcaaggacccacgcacacctccgaca
atcaaggtggatttcttcgccattgagatgctggacgggcacctttacttgctgctggac
atgggctcaggaaccaccaagaccaaggccatcgacagaaaggtcaatgacggggaatgg
tatcatgtggacttccagagggacggacgctcaggaaccatttcggtgaacagtgtgagg
acagcgtacacagctccgggagacagtgagatcctggacctggatgacactttgtacctc
ggaggactacctgaggatcgcgctggactcatcttccctacagaggtgtggacggctctg
ttgaactacggttatgtgggttgcatcagagacctgtttgtggacgggcagagcaaagac
atccgacggctggcagaggcccagagagcggtgggtgtgaagccctcatgctctagagag
ccacccaaacagtgtctgtccaacccctgccagcacaacggcatctgcagggagggctgg
aaccgctacgtttgcgactgctcagggacaggatacctgggacgctcctgtgagagagat
gcgactatcctgtcgtacgacggcagcaagtttatgaaggtgcagctgcctgtggcgatg
cacaccgaggcggaggacgtctcgctacgctttcgctcccagcgggcctatggcgttctc
atggcaaccacatcccgtaactccgcagacacccttcgtctggagctggatgggggccgt
gtccgactcactgtcaacctagactgtatcaggataaactgtacaaccagtaaaggccca
gagaccatctttgcggggtcgggcctcaatgataatgagtggcacacagtgagggtagtc
cggcgtggcaagagcctcaaactcaccgttgacgacctgcagcctgttgaaggtcagatg
gcaggcgaccacacccagttggagttccacaatgtggagacgggtattgtgacggagaag
cgcttcatgcctgccgtcccttccaatttcatcggccaccttcagggcctggcactgaac
ggcatgccctacatcgacctgtgcaagaacggcgacatcgactactgtgagctcaacgct
gttatcggctacaagagcatcgtggctgaccccgtcaccttccgatcacggtccagcttc
gtcacgctgcccacgctgcaggcctactactccatgcatctcttcatgcagttcaagaca
acgtcccccgacggccttattctgtacaacaggggagacggcaatgacttcatagtggta
gagttggttaaaggttacctacactacatctctgatctgggcaatggagcacatctgatc
aaaggcaactctaacagtcctctgaacgataaccactggcacaacgtgcatatatcccga
gacactaacaatctccacacagtcaagattgacaccaaagtcaccacgcagaccaccatg
ggcgccaagaacctggacctgaagggtgacctgtacatcgggggcatctccaaagagatg
taccgagacctgcctaagctggtccactcccgcgagggattccagggttgcctggcaaca
gttgatctaaatggccgtctccctgaccttttggctgatgccttggcaaccatgggacaa
gtagagagaggctgcgaaggtcccagcactacatgtcaagaagactcctgctcaaatcag
ggagtttgtttgcagcagtgggagggcttcacctgtgactgcagcatgacttcgtatgct
ggcccactatgcaatgacgctgggaccacttatatctttggccgtgatggaggtgtggtg
gtttacacgtggcctcccaatgaacgtcccagcaccagagcagaccggcttgcccttggg
ttcagcacccaacagaaacacgccattctgctccgggtggacagcgcgtctggcctggga
gactaccttcagctgcagatagataaaggcaacattagagtagtgtttaatgtcggcact
gatgacatcaacatcgaggagagctccaagtttgtcaacgatgggaagtaccacataata
cggttcacccgcagcggaggcaatgcaaccctccaactggacgatctgccggtcatagag
cgttatccctcaggcaacattgataacgagcgcctggccatcgccagacagcgaatcccc
tatcggctcggtcgagtagttgacgattggctactcgacaaaggtcgccagctgaccatc
ttcaacagccagacgacggtgcgcgtgggtggaggtgagcgaagtgcaggtatgttccag
ggtcagctgtctggcctctactacaacggcctccgcatcctcaacatggccgccgagggt
cacccgcacatcaaagtggagggaagcgccagactggtcggtgacatgccgtcctcctcc
atcaccccgcagtccagcgctgcagctggaggcaaccgctccgactccgccccctccata
agtgacatcacgaccaccacggccaccaacaggaaacagggcaccacacagcagtcggca
gacgacctgctggtggcgtcggctgagtgtcccagcgatgatgaagacatcgacccctgt
gaccccagttcagcccgtcctcccctgccggaggtgaaggtgttcccgggtccgtctgag
gtggtgcgggagagcagcagcaccacgggtatggtggtgggcattgtggcggccgcggcc
ctctgcatcctcatcctcctctacgccatgtacaagtatcgtaaccgcgacgagggctcc
taccacgtggacgagagccgcaactacatcagcaactcggccacgcagcccaacggcagc
accaaggacaagccgctgggcatcaccaagatctccaagaacaagaagaacaaagacaag
gagtactacgtctga
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integrated database retrieval system
