Larimichthys crocea (large yellow croaker): 104924013
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Entry
104924013 CDS
T04659
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4 isoform X2
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104924013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104924013
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104924013
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104924013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-RING_Vps41
zf-UDP
PHD
Motif
Other DBs
NCBI-GeneID:
104924013
NCBI-ProteinID:
XP_019127646
LinkDB
All DBs
Position
XIV:3597118..3610517
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AA seq
772 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVCHHIEAVIRSDPRCGSVVLGQVDSRLSPYIIDLH
SMHQFRQDTGTLRPVRRSFYDPTSAPGQGWLWEWENDAGSWTAYDTEVGIAIQAARDRQQ
PWLDLAPLGFCYLIDFESMTQINGQTQRCRRIQRRSDLAYPLVSGPLPKSHHAWGPMSMP
SHGGLLGVDVSGVGMGIRMSSSGTGNGSAYPSGALPASAITSLGQPCACQQCMLVLSVKA
GAMSTAHTLGRRPPQTKPPSPKISSHPIPGGSYSLTLPRPPSLSRSFSPHRTSIVGATGG
YSVGGMGGPGGVGIVGGSGVGSATLGYGGGFTHSLSLLGSATAALSISSTRPPPPPLPPP
PPPPPPPSTTLSSAAISPPHPSTSSSLSASCSAPTVPAPGPPLISTAASTCTPSPSARVL
GPVSSSGAAACAAPLPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVH
PALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGK
TPEEVVKRYLQKVRNPPEEDCTICMEALAGPSGYKGPGVGGISRAESVGRLAQCGHQYHL
QCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYN
IPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSSTTG
ESDTVIWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELKAQGITEEECLPRD
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgttactagcgtccgccgtggtggtatgggaatggctgaacgagcacggacgctggcgg
ccctacagcccggctgtctgtcatcacatcgaggcagtcatccggagcgacccgcggtgt
ggtagtgttgtcctcggccaggtggactctcgcctctcgccctacatcatcgatttgcat
tccatgcaccagttccgacaagacacaggtacccttcgaccggtacgacgtagcttctac
gaccccacctcagcgccaggccagggctggttgtgggagtgggagaacgacgctggcagt
tggacggcgtacgatacggaggtgggcatcgccatccaggcagcacgcgatcgtcagcag
ccctggcttgatctggcgccactgggtttctgctacctcattgacttcgaaagcatgacc
caaatcaacgggcagacgcagcgctgccgacgcatccagcgtcgctccgacctggcttac
ccgctggtgtccgggcccctgcccaaatctcaccacgcctgggggcccatgtccatgccc
agccatggaggactgctcggtgtggatgtgtccggagtaggaatggggatcaggatgagc
agcagcgggactggaaacgggagtgcctaccccagtggggcgctccctgcctcggcgatc
acttctttgggacagccctgcgcctgtcagcagtgtatgttggtgctaagcgtcaaagca
ggcgccatgtcgacggcacacactttaggtcggagacctccacagaccaagccacctagt
cccaaaatcagtagtcaccctatcccaggagggtcctactcactaaccctccctcggcct
ccttccctgtcgcggtcattttccccccacaggacatcaatagttggggcgacaggtgga
tacagtgtaggtggtatgggtggtcctggaggtgtgggtatagttggtggtagtggtgtt
ggtagtgccactcttggttatggaggaggcttcacccattctctttccctccttggctca
gctaccgccgccctctccatctcctccacccgtcccccacctccgcctctcccccctcct
ccgccgcctcctcctccaccctccaccaccctctcatctgccgccatctctccccctcac
ccctccacctcgtcctccctgtctgcctcctgttccgcccctacagtgcccgctccgggc
cctcctctcatctccacagctgcctccacctgcacgccctcaccttctgcccgagtcctg
ggtccagtgtcttcatccggtgccgctgcctgcgcagctcctctgccaccccggtccagc
ctagcagggctgagccgacctgcactgcagcgtatcgctatggctcagtcacgtgccctt
atcgcctctggagtgccaacagttccggtcaagaacctgaatggatcaagccccgtgcac
cctgcactggcaggcattacaggcatcctgatgagtgcggcaggacttcctgtctgcctg
acccgccctcccaagctggtgcttcatcctccacctgtcagcaagagtgacatcaagcct
gtgcccggattgggccactgctgtcgcaagaccacaaagaaacaggctcgcaaaggcaag
actcctgaggaggtggtgaagaggtaccttcagaaagtccgcaatcccccagaagaggac
tgcaccatctgcatggaggctcttgccggaccatccggctacaaaggccccggcgtgggt
ggcatctcccgggccgagtcggtaggccgcctggcgcagtgtggtcaccagtaccacctc
cagtgccttgttgctatgtacaacaacggcaacaaggacggcagcttgcagtgtcccacc
tgcaagaccatctacggagtcaagaccggcaaccagcccccgggtaagatggagtaccat
gtcatcccccactcgctacccggccacccagactgcaaaaccatccggatcatttataac
atccctcctggcatccagggcccagagcacccaaatccaggcaaacccttcactgcccgc
gggttccccagacattgctacctccctgacagtgagaagggacgcaaggttctgaggctt
cttctggtagcgtgggaccgccggctcattttctccgtgggtacgtccagcaccaccggc
gagtcagatacagttatctggaacgaggtgcaccacaagacggagttcggctccaacctg
acgggccacggctaccccgaccccggtcatttggacaacgtcctcgaggagctcaaggct
cagggcatcacagaggaggagtgcttacccagagactga
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