Larimichthys crocea (large yellow croaker): 104924029
Help
Entry
104924029 CDS
T04659
Symbol
lrig1
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 1
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
104924029 (lrig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_1
LRR_5
V-set
LRR_9
C2-set_2
Ig_5
Ig_C17orf99
LRRNT
LRRCT
LRR_6
Ig_4
Receptor_2B4
HHH_2
Motif
Other DBs
NCBI-GeneID:
104924029
NCBI-ProteinID:
XP_019111372
LinkDB
All DBs
Position
VI:complement(3750643..3785888)
Genome browser
AA seq
1047 aa
AA seq
DB search
MAASLGRLGCVSRCVFYLMLSLELFITYGVSSDLPCALNCTCNGDSVDCSNLELTATPLD
LPVRTVSLNLGHNKLTAINAEAFDNLPNLRELRLDHNELTSIPDLGQVASKIVSLYLHHN
KIRSIDGRRTRELVSVETLDLSNNDITELRGHCFPAGLQIKDLYLSNNKISALELGALDH
LGSTLQVLRLSRNRISQIPVKAFQLPRLTQLELNRNRIRQVEGLTFQGLSSLEVLKLQRN
SISKLTDGAFWDLAKMKVLHLDYNSLTEVNSGSLYGLTALQHLFLSNNSIARINADGWKF
CQKLRELNLSYNNLTRLDEGSLAVLGDLHTLRLGHNSISHITEGAFRGLKAVRVLELDHN
DISGTIEDTNGAFSGLDSLNKLTLFGNKIKSVAKKAFSGLETLEHLNLGDNAIRSIQPDA
FSKMKNLKTLLIQSDSFLCDCQLQWLPDWLVTRGLQAAVNATCAHPESLKGTSIFQAPSS
SFVCDDLPKPQITVQPETTVTVLGSDVHLTCTAASSSSSPMTFAWRKDQELLRHAETENY
AHVRAHHQGTTSDAPTAGGGVMEYTTILHLRHVTFAHEGRYQCIITNHFGSTYSSKARLI
VNVLPSFVKTPRDSTIRTGHTARLECAAEGHPAPQIAWQKDGGTDFPAARERRMHVMPDD
DVFFIMDVKPEDMGVYSCTAKNTAGTVSANATLTVLETPHLAQDLEDRSVVVGDTVALQC
KALGSPPPRITWLRNDQPLRPSDRHHFTPGNQLLVIGSASLEDAGRYTCLMSNTLGTERA
HSQLVVTRRRSPCIPQVGPSTVTIGIIVIAVVTSIVVTSLVWVCIIYQTRKKSEECSVTN
TDETIVPPDVPSYLSSQGTLSERQDVCIRVEAGGGHQPNGHVVDATGFDSAVVCTDCMES
SSSYSKDPDYLTHGYGPGGGMEYQQHSAPPPYSHVHPGEQHDAGSHSSPLCNGTPNGIRK
DIQGFPKNHNTLQPNQHDRKAGRAGQTPAFSPSQEDSFHKPVKLAGVTSHGHLESDCEPE
LRQTLLSNGHTLRASQNESAPLRRASD
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccctgggacggcttggatgtgtttctcgttgtgttttttatttaatgttg
tcgctcgaactgtttatcacttacggagtgagttcagatttaccctgtgccctgaactgt
acctgcaacggagattcagtggactgtagcaacctggagctgacagctacgcctctggac
cttcccgtccggactgtttccttgaatcttggccacaacaagctgaccgccatcaacgct
gaagcttttgacaaccttcccaacttgagagagctgcgactggaccacaatgagctgacc
tccataccagatttaggacaggttgcttccaagattgtatctctctacctacatcataat
aagatccgcagtatagacggcaggcggaccagagagctggtttctgtggaaaccctggac
ctgagcaataatgacatcactgagctcagagggcactgctttcctgcaggcctccaaatc
aaagacctgtacctgagcaacaacaagatcagcgcgttggaactcggtgctctggaccat
ctgggctcaactctacaggtcctgagactgagccgaaatcgcatcagccagatccccgtg
aaagccttccaactcccgaggctcacccagcttgagctgaataggaaccgtattcgtcag
gtggagggtctgaccttccagggtctgtccagcctggaggtcctcaagctgcaaagaaac
agcatcagcaaactgactgacggggccttctgggacctggccaagatgaaagtccttcac
ctggactacaacagcctgacagaggtgaacagtggctccttgtacggcctgactgccctt
cagcatttatttctcagtaacaactctatagcccgcatcaacgctgatggatggaagttc
tgccaaaagctgagagaactgaatctgtcgtacaacaacttgactcgtctggatgaaggc
agcctggctgtgctgggggatctccacactctacgtctgggccacaactccatcagccac
atcaccgagggagccttcagaggcctcaaggccgtacgcgtcctggagctggaccataac
gacatctcgggcacaatagaggacaccaatggggccttctctggattggacagcctcaac
aagctgactctgtttggaaacaagatcaagtcggtggccaagaaagccttctctggcctg
gagaccctggaacacctgaacttgggagacaacgctattcgttccatccagcccgatgcc
ttcagcaaaatgaagaacctcaaaacactgctcattcagagcgacagcttcctgtgtgac
tgccagctgcaatggctgcccgactggctggtgacacgtggtttgcaggccgccgtcaat
gccacctgtgcccacccagagagccttaaggggactagcatcttccaggctccatccagc
agctttgtttgtgacgaccttccaaagccccaaatcaccgtgcagccagaaactacggtg
acggtcctcggcagcgacgtgcatctcacctgtacggccgcgagcagcagctcctccccc
atgaccttcgcgtggcgtaaggaccaggagctgctccgccacgcagagacggagaactac
gcccacgtccgcgctcaccaccaaggcacaacatccgacgctcccacggctggaggaggg
gtgatggagtacaccactatcctgcacctgcgccatgtcaccttcgcccacgagggccgc
taccagtgcatcatcaccaaccactttggctctacctactccagcaaggcccgcctcatc
gtcaacgttctcccatccttcgtaaagactcccagggacagcaccatcaggacaggccac
accgcgaggcttgagtgcgccgcagagggccacccggcgccgcagatcgcctggcagaag
gacggcggcacggatttccccgctgcacgggagcgtcgtatgcacgtcatgcccgatgac
gacgtgttcttcatcatggacgtcaagccggaggacatgggcgtgtacagctgcactgcc
aaaaacacagcgggcaccgtctccgccaacgccaccctcacagtgctggaaacaccccac
ctggcccaggacctggaagaccgcagcgtggtggtcggggacaccgttgccctgcagtgc
aaggccctcggcagcccgccgccccgcatcacctggctgcgcaacgaccagccgctgcga
ccctccgacagacaccacttcaccccggggaaccagcttctggtcatcggctcggcctcg
ctggaggatgccggacgctacacctgcctcatgtccaacaccctgggaacagagcgcgct
cacagccagcttgtggtgacccgacgccgcagcccctgcataccgcaggtggggccgagc
accgtcacgatagggatcatagtcatcgccgtggtgacaagcatcgtggtgacgtcgctg
gtgtgggtgtgcatcatctaccagacgaggaagaagagcgaggagtgcagcgtcactaac
acagatgagacgatagttcctccagacgtgcccagctacctctcctcccagggcactctg
tctgagcggcaggacgtgtgcatccgcgtggaggccggcggtggacatcagcccaacgga
cacgtcgtagatgccacaggtttcgacagtgcagtcgtgtgtacggattgcatggagagc
agcagcagctactccaaagatcctgactatctgacgcacgggtacggccctggtggaggc
atggagtaccaacaacactctgctcccccgccctactctcacgttcacccaggggaacag
catgatgcggggtcacactcgtccccgctgtgcaacgggacacccaacggaatccgaaag
gacattcaaggatttccaaaaaaccacaatacgttacaaccgaaccaacacgatagaaaa
gcgggcagggcgggacagacgccggcgttctctccatcacaggaagactccttccacaag
ccggtgaagctggccggcgtgacgagccacggccacctcgagagtgactgtgagcctgaa
ctcaggcagactctgctgtccaacggacacaccctcagagcctctcagaatgagagcgcc
cccctaaggagagccagcgactag
DBGET
integrated database retrieval system
