Larimichthys crocea (large yellow croaker): 104924053
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Entry
104924053 CDS
T04659
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X2
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104924053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104924053
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104924053
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104924053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-UDP
zf-rbx1
zf-RING_2
zf-LITAF-like
WWE_5
Motif
Other DBs
NCBI-GeneID:
104924053
NCBI-ProteinID:
XP_010735585
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Position
III:complement(39302039..39319499)
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AA seq
569 aa
AA seq
DB search
MAIVSGSCARVNGSRNGPSVSATPSGSVGQSQPMIAVWEWQDDLGYWRPYSGQVSAYIER
CLAPRGQRGGGPGSTSICLGQSDPSLSPYLIDIPSLKQFRQDTGKTRSVRRSLFAQSSGL
GSGVYWEWANDEGGWTPYETRTSILLEHSYQARQGTADLGPHGYNYIVDLTSLAQVNKST
GFRRQVRRQCNLPYPLASSGPPAIPSGPACSCQQCLSHSSTGPMPSRSRHSFSSGSLNRP
SLQGPGRAVAAHPTSVYSPYPRRPLSVGGMSWGSPWPPPPSGSQLSAPLLTSSTSANGLS
VPSISVQLNGSTSVSSALAASAQRPEEVIQRYMEVVAGAPDEDCIICMDQLSNPSGYETP
STEEGGQSILSDTVGKFIKCGHTLHMLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGTQPK
GKMEIYSIAQSLPGHPDCGTIQIIYSIPPGIQGPEHPNPGQPYTCRGFPRFCFLPDNDKG
RKVLELLKVAWMRRLIFTVGTSSTTGEPDTVVWNGIHHKTEMMSNLSGHGYPDPNYLDNV
LSELASQGVTEECLKPPGGGGGGGGSTTN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgtgtctggctcctgtgctcgggtaaacggctccagaaacgggccgtccgtg
tcagctacaccttctggatccgttggacagtctcagcccatgatagcggtgtgggaatgg
caggatgacttagggtactggcggccttacagcggccaagtgagcgcctacatcgagcgg
tgtctggcaccgcggggccagagaggaggaggacccggctcgacgagcatctgcctcgga
caatcagaccctagcctgtcgccttatctcattgacataccgagcttgaagcagtttcgg
caggacacgggaaagacgcggtcagtacgtcgctcactgttcgcccagtcctcaggcctc
ggcagtggtgtttactgggaatgggccaacgacgaaggaggatggactccatacgagact
agaacctctatccttttggagcacagctaccaggcccgtcaagggacggcagacttgggg
ccgcatggatacaattacatagtggatctcacatctttggcccaggttaacaaatccacg
ggctttagacggcaggtccggcggcaatgtaacctcccttacccactggcctcctctggt
cccccagctatcccctcgggcccggcctgctcctgccaacagtgtttgagccacagcagc
acaggaccaatgcccagccgttcacgacattccttttcatcaggcagtctgaaccggccc
agcctccaagggccaggaagggctgtagctgctcaccccacttcagtgtactcgccgtac
cctaggagacccctctctgttgggggaatgtcctggggtagcccatggcctccaccgccc
tctggtagtcaactgtctgcaccacttctgaccagctctaccagtgcaaacgggttaagt
gttccttccatctctgtgcagctgaatggatccaccagcgtcagctctgcccttgcagcc
tccgctcagagacccgaggaggtgattcagcgctacatggaggtagtggccggagcaccg
gatgaggactgcatcatctgcatggatcaactgtccaatccatctggctacgagaccccc
tccacagaggagggaggccagagcatcctgtcagacactgtggggaaattcatcaagtgt
gggcacaccctgcatatgctctgcatgctggccatgtacaacaacggcacaaaggacggc
agtctgcagtgcccctcatgtaagacaatctacggagagaagaccggcactcagcccaaa
ggcaagatggaaatttacagcatcgcccagtcgctgccgggtcacccggactgtggcacc
atccagatcatctacagcataccacctggcatacagggccccgagcatccaaacccagga
cagccgtacacctgtagaggcttccctcgcttctgttttctaccggacaacgacaagggc
aggaaggtgctggagctgctgaaggtggcgtggatgcgacgcctcatcttcaccgtggga
acgtccagcacgacaggcgagcccgacacagtggtgtggaacggcatccaccacaaaaca
gagatgatgtccaacttgtcgggccacggctatcccgacccaaactatttggacaatgtt
ctgtctgagctggcctctcagggcgtgacagaggagtgcctcaaacctccaggcggtggc
ggtggtggaggcggcagcactaccaactag
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