KEGG   Larimichthys crocea (large yellow croaker): 104924139
Entry
104924139         CDS       T04659                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04137  Mitophagy - animal
lco04144  Endocytosis
lco04145  Phagosome
lco04148  Efferocytosis
lco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104924139
   04145 Phagosome
    104924139
   04137 Mitophagy - animal
    104924139
   04148 Efferocytosis
    104924139
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104924139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lco04131]
    104924139
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lco04147]
    104924139
   04031 GTP-binding proteins [BR:lco04031]
    104924139
Membrane trafficking [BR:lco04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    104924139
 Endosome - Lysosome transport
    104924139
Exosome [BR:lco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104924139
  Exosomal proteins of other body fluids (saliva and urine)
   104924139
  Exosomal proteins of colorectal cancer cells
   104924139
  Exosomal proteins of bladder cancer cells
   104924139
GTP-binding proteins [BR:lco04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    104924139
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_16 B12-binding
Other DBs
NCBI-GeneID: 104924139
NCBI-ProteinID: XP_010735689
LinkDB
Position
XVI:17919769..17924910
AA seq 221 aa
MAGRGGGATRPNGATVANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKEL
QRQASPNIVIALAGNKADIANKRAVELQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNDPQAGAGQGGRTRIGVDLQEAAPQGHSRQCCGGGN
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctgggcgcggtggaggagcaaccaggcctaatggtgccacggtagcaaacaagatc
tgccagttcaaactggtgctgctgggcgagtcggcggtgggaaagtccagcttagtgctg
cgctttgtcaaaggccagtttcatgaattccaggagagcaccattggagctgccttcctc
actcagaccgtctgtctggacgacaccactgtgaagtttgagatctgggacacggcaggt
caggagcgctaccacagcctggctccaatgtactacagaggcgctcaggctgccatcgtg
gtttacgacattaccaacacggacacatttgcacgagcgaagaactgggtgaaggagctg
cagagacaagccagtcccaacatagtgatcgctctggctggaaacaaggcggacattgca
aacaagagagctgtagaacttcaggaggcacaagcatacgctgatgacaacagtctactc
ttcatggagacctcggccaagaccgccatgaacgtcaatgaaattttcatggctattgcc
aagaaactaccgaagaacgaccctcaggccggagccggacaaggtgggcggaccaggatc
ggagtggatctacaggaagctgctccacaggggcacagcagacagtgctgcggcgggggc
aattag

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