Larimichthys crocea (large yellow croaker): 104924145
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Entry
104924145 CDS
T04659
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
lco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104924145
03015 mRNA surveillance pathway
104924145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104924145
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104924145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_5
RAP1
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
104924145
NCBI-ProteinID:
XP_019111250
LinkDB
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Position
XVI:13127817..13131141
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AA seq
275 aa
AA seq
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MAPSPTKRKEDDKSKQRGKEKSGAAKEAGDKGRGREKNRTRRSASSGSSRSSSSSSSSSG
SSSGSSSGSSSSASSHSGSSSSRSSSSSSSSSSPSPSRQRHNNRRRSRSKSKSAKKDDRD
RRRRSPTPKPTKVYLGRLTRNVIKEHIQEIFATYGKIKMIDMPMNRVHPHLSKGYAYVEF
ETPEEAEKALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMWRRSPPRM
RRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttccccgacaaagaggaaggaggacgacaagagcaaacagcgaggtaaagag
aagtcaggagccgcgaaagaagcaggtgacaaaggccggggccgagagaagaaccgcaca
cggcgcagtgcctccagtgggagcagcaggtccagctcgagctccagcagcagctcaggc
tccagctcaggttcctccagtggctccagctcctctgcctccagtcactcgggctcatcc
agctcccgctcctcttcctcctcctcctcgtcctcttcaccgagccccagccgccagcga
cacaacaacagacgacgctcgcgctcaaagtcaaaatcagcgaagaaggatgaccgggac
cggcgacgtaggagccccacacccaaacccaccaaggtgtacctgggccggctgaccagg
aatgtcattaaggaacacatccaggagatcttcgccacttacggcaagattaagatgatc
gacatgcccatgaaccgcgtccaccctcacctgtccaaaggctacgcctacgtggagttt
gagacgcccgaggaggcggagaaggccctgaaacacatggatggaggtcagatcgacggt
caggagatcacagtcacagctgtgctgactcccacagtgcgtcctccccctcgcaggctg
tccccgccccgcaggatgcctcccccaccaccaatgtggcgacgcagtccacctagaatg
aggagaaggtctcggtctccacggcgacgttctccagtgcgtcgcaggtctcgttcaccc
gggcgccgccgccaccggtcacgctctagttccaactcttcccgctag
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