KEGG   Larimichthys crocea (large yellow croaker): 104924156
Entry
104924156         CDS       T04659                                 
Name
(RefSeq) cullin-3 isoform X1
  KO
K03869  cullin 3
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04120  Ubiquitin mediated proteolysis
lco04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104924156
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    104924156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lco04121]
    104924156
   03400 DNA repair and recombination proteins [BR:lco03400]
    104924156
Ubiquitin system [BR:lco04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     104924156
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104924156
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 104924156
NCBI-ProteinID: XP_010735711
LinkDB
Position
VII:8884550..8897319
AA seq 825 aa
MNNYRIWRLAVNNKLAVPGRGATRSSESSSAAPYTCSRPPSLPGEYFHVNTEPTDEATMS
NLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAYT
MVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDIL
MYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAI
RNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINE
EIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTDDLACMYKLF
SRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNND
RLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQ
EKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTT
MDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLGKH
SGRQLTLQHHMGSADLNATFYGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILM
LFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTVND
QFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLV
AEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgaacaactatcggatttggcgtttggctgtcaacaataaactcgcggtgccgggacgc
ggagctacgaggtcgagtgaaagctcgtcggctgctccatatacctgtagtcgccccccg
tccctccccggagaatactttcatgtgaatacagagccaacggacgaggcaaccatgtcc
aatctcagcaaaggcggcaccaagaaggacaccaagatgaggatacgggcctttcctatg
acgatggatgagaagtacgtcaacaacatctgggaccttctgaagaatgccatccaggag
attcagaggaagaacaacagcggcctgagcttcgaggaactatacaggaacgcctacaca
atggtgctccacaaacatggagagaagctgtacacaggcctacgggaggtcgtcactgaa
caccttatcaacaaagtacgagaagatgtcctcaactcgctaaacaataacttcctccaa
accctaaatcaggcctggaatgaccatcaaacagcgatggtgatgatcagagacatcctg
atgtatatggaccgggtgtacgtacagcagaacaacgtagagaatgtctacaacctgggt
ctaatcatctttagggatcaagtggtgcgttatggctgcatcagagaccaccttcgacag
accctgctggacatgatcgcacgtgaaaggaagggggaggtggtggacaggggggccatt
agaaatgcctgccaaatgttaatgatcctcggccttgaagggagatctgtttatgaagaa
gattttgaggcaccgttcttagaaatgtctgcagaatttttccagatggagagccaaaag
ttccttgcagaaaacagtgccagcgtgtacataaagaaagtggaagccaggatcaatgag
gagattgaacgggtgatgcactgcctggacaaatctacagaggagcctattgtcaaggtg
gtggaacgtgagctcatctccaaacacatgaagacaatcgtagagatggagaactctggc
ctggtccacatgctcaaaaacggcaagacagacgatttggcgtgcatgtacaagctgttc
agcagggttcccaatgggctgaagaccatgtgtgagtgcatgagctcatatctccgggag
caaggcaaagccctcgtgtcagaggagggagagggaaagaaccctgtagattacatccag
ggtttgctggacctgaagtcacgtttcgaccgtttcctccaagagtcctttaataatgac
cggctcttcaaacaaactattgcaggcgactttgagtacttccttaacctcaactctcgc
tcgcctgagtacctctcactctttattgatgacaaactgaagaaaggagtaaaagggttg
acggagcaggaggtggagtctatactggacaaggccatggtgctgttccgcttcatgcag
gaaaaggacgtgtttgagaggtactacaagcagcacctcgctcgcaggctgctcaccaac
aagagcgtctccgatgactctgagaagaacatgatctcaaagctcaagactgagtgtggc
tgtcagttcacctctaaactggagggcatgttccgggatatgagcatctccaacaccacc
atggacgagtttaggcaacatctacagacaactggggtgtcacttggaggggttgacctc
actgtgagagtcctgaccacgggatactggccaacacaatcagcaacacccaagtgcaac
atccccccttcaccgcgacacgcgtttgaagtctttagaaggttttatcttggtaagcac
agcggcagacaactcacactgcagcaccatatgggctctgcagatctaaacgccaccttc
tacggccccatcaaaaaggaggacgggtcagaggtcggagttggaggagcccaagtaact
ggctccaacaccaggaagcacatcctgcaggtctccaccttccagatgaccatcctcatg
cttttcaacaacagagaaaaatccacctttgaggagatccagcaggagacggacatccca
gagagggagttagtgcgggcgctgcagtctctggcctgtgggaagcccactcagagagtt
ctcaccaaggagccaaagtccaaggagatagaaaatggccatgtgtttacagtcaatgac
cagtttacctccaaactgcaccgtgtcaagatccagacagtggccgctaaacagggggag
tccgacccagagaggaaggaaacacgacagaaagtggacgacgacagaaagcatgagatc
gaagctgccattgttcgcatcatgaagtccagaaagaaaatgcagcacaacgtcctagta
gcagaggtcacacagcagttgcgagcacgattccttcctagtcccgtagtcatcaagaag
cgcattgaaggactcattgagagggaatatttggcacgaacaccagaggaccgcaaagtg
tacacatacgtagcataa

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