Larimichthys crocea (large yellow croaker): 104924215
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Entry
104924215 CDS
T04659
Symbol
ctnna1
Name
(RefSeq) catenin alpha-1
KO
K05691
catenin alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04520
Adherens junction
lco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104924215 (ctnna1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104924215 (ctnna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104924215 (ctnna1)
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104924215 (ctnna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
HTH_psq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
104924215
NCBI-ProteinID:
XP_010735791
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All DBs
Position
I:39054465..39130020
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AA seq
907 aa
AA seq
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MTSINTANINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHV
LAASVETATQNFLEKGEKIAKESQFLKDELTAAVEDVRKQGDSMRQASGEFAEDPCSSVK
RGNMVRAARALLSAVTHLLVLADMSDVYKLLLQLKLVEDNLVKVRNAGTEQDLGIQYKAL
KPEVDKLNIMAAKRQQELKDVHHKDQMAAARGVLQRNIPMLYTASRACLQHPDVAAYKAN
RDLIYKQLQHAVSGISNAAQATTTEDSALSQPAGGGELAYALNNFDKQIIVDPLAFSEER
FRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNAGRKDR
SDALNTAIDRMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYA
QVFREHANKLIEVANLACSISNNEEGVKLVRMAASQLESLCPQVINAALALAAKPNSKVA
QDNMDLFKEQWEKQVRVLTDAVDDITSIDDFLCVSENHILEDVNKCVIALQEKDVDGLDR
TAGAIRGRAARVVHVVTSEMDNYEPGVYTEKVLEATKLLTDTVMPRFTEQVESAVEALSA
NPTLPVDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTED
DQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMC
MIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADNCPDSTCKQDLLAYL
QRIALYCHQLNICSKVKAEVQNLGGELVVSGLDSAMSLIQAAKNLMNTVVSTVKASYVAS
TKYQKNKGMEALNMPAISWRMKAPEKKPLVKREKQDDGQTNRVKRSSHKKHINPVQALSE
FKAMDSI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcatcaacacagccaacatcaactttaaatgggatccaaagagtctagagatc
cgtactctggctgtggagcggctgctggagcccctggtgacccaggtcaccactttggta
aactccagcaacaaaggcccatctaacaagaagaaaggacgctccaagaaggctcacgtt
ttggcggcatcggtggagactgccacccaaaacttcctggagaaaggagaaaagattgca
aaggaaagtcagtttcttaaggacgagctgactgctgctgtggaagatgtccgcaagcaa
ggtgactcaatgcggcaggcttctggagaatttgcagaagacccctgctcgtccgtgaag
aggggcaatatggttcgtgctgccagagccctcctgtcagcagtcacacatctgttggtt
ctggcagacatgtctgatgtctacaaacttctactgcagcttaaactggtggaggacaat
ctggtgaaagtgcgtaatgcaggaacagaacaggaccttgggatccaatataaggccttg
aaaccagaggtggacaagctgaacatcatggcggctaagagacagcaggagcttaaggat
gtccaccacaaggaccaaatggccgcagctcgcggggtgctacagaggaacatccccatg
ctgtacacggcgtcccgtgcctgtctgcagcaccctgacgtggcagcctacaaggctaac
cgtgacctgatctacaagcagctgcagcacgcagtctctggcatctccaacgctgcccag
gccactaccactgaagactcagcactcagtcagccagcagggggtggagaactcgcctat
gccctcaacaattttgataaacaaatcatcgtggaccccctggcgtttagtgaggagcgt
ttccgtccctccctggaggagcgcctcgagagcattatcagtggtgctgccctcatggct
gactcttcttgcacgcgtgacgaccgcagggagcgcatcgtggctgaatgcaattctgtg
cgccaggctcttcaggaccttctgtctgagtatatgggcaatgcgggaaggaaggacagg
agtgatgctctgaacacagccatcgacaggatgaccaagaagaccagagacctgcgcaga
cagctgcgtaaagctgtaatggaccatgtctctgactctttcctggagaccaatgttccc
ctcctggtcctgattgaggctgccaagaacggcaacgagaaagaagtcaaagaatatgca
caggtgttccgcgagcacgccaacaagctgatcgaggtggccaacctggcatgctccatc
tccaacaatgaagagggagtgaagctggttcggatggcagcatctcaactggagagtctt
tgcccccaggtgattaatgcagcgttggcccttgctgccaagcccaacagtaaggtggcc
caggacaatatggatttgttcaaggagcagtgggagaagcaggtccgcgtcctcactgat
gctgttgatgacataacatccattgatgacttcctttgtgtgtctgagaaccacatcctg
gaggatgtgaataagtgtgtcatcgctctgcaggagaaagatgtggatggtttggatcgc
actgctggggctattcgaggccgtgctgccagagtcgtccatgtggtcacttctgaaatg
gacaattatgaacctggagtgtacacagagaaggtgttggaggccaccaagctcctcact
gacacagtcatgccacggttcacagagcaggtggagtctgcagtagaggccttgagcgca
aaccccacactacctgtggatgagaatgagttcattgacgcgtcccgtctggtgtatgat
ggcattcgcgacattcgcaaggctgtcctcatgatcagaactccagaggagttggatgac
tctgactttgagactgaagactttgatgttcgcagcaggaccagcgtgcagaccgaggat
gaccagcttattgccggccagagtgctcgggctatcatggcccagttgccccaggagcag
aaggcaaagattgcagaacaggtggctagcttccaggaagagaagagcaagctggatgct
gaagtatccaagtgggacgacagcggcaatgacatcattgtgttggccaagcagatgtgc
atgatcatgatggagatgacagactttaccagggggaaagggccactgaagaatacgtct
gatgtcatcagcgctgccaagaaaattgccgaggcaggatcaagaatggacaagctgggc
cgcaccattgctgacaattgccctgactccacctgtaagcaggacctgctcgcctacctg
cagcgtatcgccttgtactgccaccagctcaacatttgcagcaaagtcaaggctgaggtg
cagaacctggggggagagctggtcgtgtctgggttggacagcgccatgtccctcatccag
gccgctaagaacctgatgaacacagtggtgtccaccgtcaaggcctcctacgttgcatct
actaaataccagaagaacaaaggcatggaggcccttaatatgccagccatctcctggaga
atgaaagctccagagaagaaaccactggtgaagagagagaagcaggacgacggccaaacc
aacagagtcaagagatcctctcacaagaagcacatcaaccctgtgcaggctctgagcgag
ttcaaagccatggatagcatctag
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