Larimichthys crocea (large yellow croaker): 104924478
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Entry
104924478 CDS
T04659
Symbol
slc6a5
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104924478 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104924478 (slc6a5)
Transporters [BR:
lco02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104924478 (slc6a5)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104924478
NCBI-ProteinID:
XP_027136860
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Position
VIII:complement(6313059..6336233)
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AA seq
784 aa
AA seq
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MFQDFSDQRDMAKQPPSAPTGYIPTQQPDGAAGLTTNKPDNTAACPAPAPHHHPAPQPPP
PCNESKTFCLTENKPGELDSNKAYGTFKNPPPAVPGSVAVNSAFRKDSTGSARGGAAQYG
DPLRATAEQNNTAGNWTAMSQTTIILGTDGNTSVQPGTVTGTDDDDDGGEENKARGNWSX
KLDFILSMVGYAVGLGXVWRFPYLAXQNVGGAFLIPYLTMLGIAGIPIFLLEVSLGQFAS
QGPVSVWKCIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCRNEWN
TVECKDKDMLLLDTCILRDRNITSIKNSTFCLSANAVGNLTKLINMTVDGNKTYVSPSEE
YFKYNVLHISKGIEYPGDIRWPLAGCLLLAWLIVYASLAKGIKSSGKVVYFTATFPYVVL
VILLIRGVTLPGAFDGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNK
FHNNCYRDTIIVTCTNSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEA
LTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKYLRKHKPLFTLVCCASF
FILGFPMITESGMFMLQLVDTFAASYSLVIIAIFELVGISYLYGLQRFCEDIEMMIGFQP
NRFWRICWAFVTPTILTGILGLSLYQWKVMTYEDYTYPTWSMVMGWLMVICSVIWIPIMF
VIKMYLAPGTIIERLKLVCSPQPDWGPFLMKHRGERYKNMIDPLGTNSLGLKLPPKDFQL
GSYQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggatttctctgaccagagagacatggccaaacagccgcccagcgctcctacc
ggctacatcccgacgcagcagcccgacggagctgcgggacttacaacaaacaaaccggac
aacactgctgcgtgcccggcgcccgcccctcaccatcacccggcgcctcagccgcctcct
ccgtgcaacgagagcaaaactttttgtctcacggaaaataaaccgggagaattggacagc
aataaagcgtatgggacgtttaaaaaccccccaccggctgttcccggatccgtggccgtc
aactcggccttcaggaaggattccaccggttcggcccgcgggggggcggctcagtacggc
gacccgctccgggccaccgcggagcagaacaacaccgcgggcaactggacggctatgagc
cagaccaccatcatactgggaacagatgggaacacgtctgttcagcccggcaccgtgacg
gggactgacgatgatgacgatggtggagaggagaataaagccagaggaaactggtccnna
aaactggattttattctgtccatggttggctatgcggtgggactggggnaagtgtggagg
tttccttatctcgccntccaaaatgtgggaggagcttttttgatcccctacctgacaatg
ttgggcattgctgggatcccaatctttctcctggaggtgtccctgggtcagtttgccagc
cagggccccgtgtcagtgtggaaatgcatcccagctctgcaaggttgcgggattgccatg
ttgataatatctgtcttgatagccatatactataatattattatgtgctggacactgtac
tacctgttcgcttcgttgaagggctcactgccatgggctaactgtaggaatgagtggaac
acggtggaatgtaaggacaaagacatgctgctgttagacacgtgcatcctgcgggacaga
aacatcacctccatcaagaactccacgttctgtctgtccgcaaacgctgtgggaaacctg
acgaaactgataaacatgactgtggacggcaacaagacctacgtcagccccagtgaggag
tacttcaagtacaacgtgttgcacatctctaaaggaattgaatatccaggagacatccgc
tggcctctggcaggctgtctgctcctggcttggttgatcgtttacgcctctttagccaaa
ggaatcaagtcatcaggaaaggtggtttatttcacagccacattcccctatgtggtgctg
gtcatcctgctgatcagaggagtgaccctccccggtgcctttgacggcatcctttacttt
atcacaccaaagtgggagaaactgaatgatgcaaaggtgtggaaagacgcagccactcag
atcttcttctctctgtcggctgcttggggaggcctcatcactctctcttcctacaataag
ttccacaataactgctacagggacactattattgtgacatgtactaacagtgccaccagt
atatttgccgggtttgtcatcttctcggtcattggtttcatggcacatgagttgaaagtg
cccatagagaaggtggcagatgaaggtccaggcatagcgttcgtggtgtatccagaggct
ctgaccagacttcccctgtctcctttctgggcgataatcttcttcctcatgctcctgact
cttggtctggataccatgttcgccaccatcgagaccatcgtaacctccgtgtcagacgag
ttccccaaatacttgaggaaacacaaaccgctgttcaccctggtctgctgcgccagcttc
ttcatcctcggatttcccatgatcacagagagtgggatgttcatgctgcagctggtggac
acgtttgcagcctcctactctttggttatcattgctatctttgagctggtggggatttcc
tacctttacggtctgcagaggttttgcgaggacattgaaatgatgattggtttccagcca
aaccgattctggagaatctgctgggcctttgtgactccaaccattctgacgggcatcctt
ggactgagcctgtaccagtggaaggtgatgacctacgaggactacacctaccccacctgg
tccatggttatgggctggctcatggtgatctgctccgttatctggatacccatcatgttc
gtcattaagatgtacctcgctcccggcaccataatcgagcgtctgaagctggtctgctcc
cctcagcccgactggggtcctttcctgatgaagcaccgtggagaacggtacaagaacatg
atcgaccctctgggaactaactccctgggcctcaaactgccccccaaggactttcagctc
ggctcctaccagtag
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