Larimichthys crocea (large yellow croaker): 104924481
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Entry
104924481 CDS
T04659
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104924481 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104924481 (gtf2f1)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
104924481 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
104924481
NCBI-ProteinID:
XP_010736136
LinkDB
All DBs
Position
XII:complement(20955657..20961107)
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AA seq
532 aa
AA seq
DB search
MTSLGSSSSSATEYTVRVPKNTSKKYNIMAFNAGDRVNCSTWTQARMERDMSARRIYGEE
ETQEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGQKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPLAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RFREQERGEDDEDEGEKSGKKKKKGGGRGGDLRIHDLEDDLEMSSDDSDSSMGDDGESKT
KAKKDTGKGKGKKKKKKSSEEALEDSDDGDYEGLEVDYMSDESSSDEEPEKGVKPSKGED
LPKGIDEASESEEESEEEKPNEEEAKEEEEEEEGKKTPVQVEKKKKKDSSGESDSSDDSD
IEGETASALFMKKRTPPKRAGGRGSAGSSRTGSRPGTPSIDSASTSSTLRAAASKLEQGK
RQTQGPATDSPAAKRLKMEPSSQSPAPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRYLIR
KPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacttcactggggagcagcagctcttcagccacagaatacaccgtgcgggtccccaag
aacaccagcaagaagtacaacataatggctttcaatgcaggagacagagtcaactgttca
acctggacgcaggcccgtatggaaagagacatgagcgctcggcggatatacggcgaggaa
gagacgcaggaaggtgcggctggcagtgagtttggcaaaaaacaacgcgaggaagcgcgg
cggaagaagtttggcatcgtgacacgtgagttcaaagtggaggaccagccctggatcctc
aaggtcaacggcaaggccggcaaaaggttcaaaggtcagaagaagggcggcgttacagaa
aatgcatcctactacatctttacacagtgtcctgatggagcgttcgaggctttccccgtc
cacggctggtacaacttcaccccactggccaagcaccgaactcttactgctgaggaggct
gaggaggagtggggcaggaggaacaaggtggtaaaccacttcagcatcatgctgcagaga
cgtttccgagagcaggagcgtggtgaggatgatgaagacgagggagagaagtcagggaag
aagaaaaagaaggggggtgggcgagggggcgacctgcgcattcatgacctggaagacgac
ctggagatgagcagcgatgacagtgacagcagcatgggggacgatggagagagcaaaaca
aaggcgaagaaagacacgggcaaaggaaagggaaagaagaagaagaagaagagcagtgaa
gaggccctggaggacagtgatgacggcgactacgagggtctagaggtggactacatgtca
gatgaaagcagttcagatgaagaaccagaaaagggagtaaaacccagcaagggagaggac
cttcctaaaggcattgatgaggcgtctgaaagtgaggaagagagcgaggaggagaagcca
aatgaagaggaagcgaaagaggaggaagaagaagaggagggaaagaaaaccccggtccaa
gtggaaaagaagaagaaaaaagacagcagcggagagtcggacagctcagacgacagtgac
atcgagggagagacggcttctgctctatttatgaagaagcgcacacctcctaaacgtgca
ggtgggcgtggttctgcaggcagctccagaactggcagtcgccccgggacaccatccata
gactctgcttctacctccagtacactccgtgctgctgcaagcaagctagagcaagggaaa
agacagactcagggtcctgccactgactcaccagctgccaaaaggttgaagatggagccg
agcagtcagagccctgctccttctgggaagagtacgcctcaacccccatcgggcaaatcc
actcctagctcaagtgatgtgcaactaacagaggaagcagtccggcggtacctgatccgt
aaaccgatgaccaccaaagacctgctgaagaagttccagaccaagcgcacaggtttaagc
agtgagcagactgtcaatgtgctggcacagatcctgaagcgcctaaacccagagcgcaaa
aatgtcaatgacaaaatgcacttctacctcactgaataa
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