Larimichthys crocea (large yellow croaker): 104924552
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Entry
104924552 CDS
T04659
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
lco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104924552 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104924552 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104924552 (nup153)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104924552 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
104924552
NCBI-ProteinID:
XP_010736235
LinkDB
All DBs
Position
XIII:complement(40352671..40367942)
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AA seq
1535 aa
AA seq
DB search
MTAIRRRNTDRHSDERAMAATGGGKIRSRRYHIASKPYAKSKQQQSGLISRVTDTVKSIV
PSWLQKYFKNEDASEGGGAVLGTDQNCQLPPPPPPNGSEEGPPPLDGRDSPEPSTSNTEP
STSRASLNFQEYVLSRPPLSRSHLHFPPLDVSSPTLGASSSLFSQPSTSSAPGPFSTGFS
LVKEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPQLWSPETDRTNSGPQPAQS
SLKRPAFNLSVFGTSSNSTFNNTVLNSSQLGDSPFYPGKTTYGGAAAVRSARTRPGTPYQ
APVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADARRIPAAASSPLSASMDDTN
LDGSPFQTKKKRMDSSLPPVQKLVVPAAAPVSGNRSVSFRPTLTPGGMSRPLDRTPRDTP
TRQSPQLPEATPGPSQSTMGSSGPTYPLSSTPAASSVSSGGGKMKRERTTARPSSKRADE
EEVAEVPDLPTISLPINTCNMPTFSFISPLPPLTTISNSLNVTPVTPAKETVNKEPPTAL
TPPCVPFTFSSPIVKATAASPPSFSPSAGFTFSAPVAKLGPSMSNGNLATPITAAVKPAA
SKSTEDFEGPFKPAKTLKQGSVLDLLKAPGFASPVARTSQGPDNTPQQTSTQSTAPSSSA
TTTTSSLSSSTGFGDLLKAPPGWTCDTCLVSNKLSDTKCVCCMTPQPNSSSSKSMDSKPS
AITSVGLESSSSSNTTSTTTTTTGFGTVFSKPAGTWDCDTCLVRNKPDAVKCVACETAKP
GTGLKPSLTLPSAFSAVKTVSTPTAPVSTGFSGFGDKFKKPEGSWECDACMVVNKAVDTK
CAACQTAKPGASAAAASSSASSAPVFGLADAFKKPEGAWDCDVCLVQNKAADLQCVACQT
AKPGAKVEPKAFGSSFGSSVGGTSGSSTSTSGGFKFGTSDSTSGSGSGGFKFGGSLSESS
SSSSGGFKFGVPFGSSSSETTSKDTTASSGFKFGSSSEGFKFGVASSDDKKSDQPAADSG
FKFGTSGGIVFGTGSSNTESNTSKGGFTFGLSKPEEKTSDTTTTTTSSSSVSFTPPSSSQ
EKSDSVASSNDTTSTNTNSITTTATTAGSVFARLGERSLATATPQVGSTFGSLQADKEPA
APTFTFGKPEEKKEAAAPSAPSAFLFGAASKDADAAPVPAASGGFSFGKPSAPTEQPPPA
FTFGKPADKSETSTAEAPKPSFTFGQSATDSSAAPKPSFSFMASNPTTTNSTTSSSSIPT
PSLFGATTTTSSSSSSTQAPAPSAASNTFMFGQPAATSTDAPPAKAAFVFGQSQDSQPPA
PSAAPLNSTATPAPAQPFIFGAPASAAAPPPAAAAPPSFGFGAAAPSAASSSAPSAAPAP
FAFSSAPSGGFGANQTPSFGSSFGSPFTATSSQTPTFGAKPNAAPVFGQQANSTPVFGAN
TNSAPGGGFQFGGASAFGATNNASGVFTFGAGSAASPAPSANASITPQSGAPGGGFNFAQ
PPTFNIGSTKSFTPTPAGQPAIAGRKIKTAVRRRK
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacaccgatagacactcagacgaaagagccatggcggcc
acgggtggagggaaaattagaagcaggagatatcatatcgcctctaaaccttacgccaag
agtaaacagcagcagtcaggcctcatcagtcgagtgacagacacagtaaagagcatcgtt
ccctcctggctgcagaaatacttcaagaatgaagatgcttctgaaggaggaggtgctgta
ctggggacagaccagaactgccagctgccaccgcctcctcctcctaatggcagtgaagag
gggcctcctccccttgatggacgcgactccccagagccaagtaccagtaatacagagccc
tctaccagccgggcatccctgaactttcaggagtatgtgctttctcggcctcctctgagt
cgctcccatctccactttcccccactggatgtctcctcccctactctgggggcttccagc
agcctcttctctcaaccttccacctcctcagcccctggacccttttccacaggcttctcc
ttggtcaaagaaattaaggacaacctctcgcagcacgaagatgataacatctccaccact
agtggcttctcatcccgcgcctctgacaaagatgtccccacttccaaaacggcatcactt
cctcaactttggtccccagagacagacagaacaaactctgggccacagcctgcccagtcc
agtctgaaaaggcctgcgttcaacctgtctgtatttggaacttcttccaactcgacattc
aacaacacagtgctgaactccagccagcttggagattcacccttctatccggggaagacc
acgtacggcggggccgctgcagtcaggagcgctcgcactcgccccggaacaccgtaccag
gctccggtgaggagacagatcaaggccaagcctgctggtgctcagccctgcggggtgacc
agtgccacagccagacgcatcctgcagtctttggagcgcatgtcgagccctttggctgat
gccaggagaatcccagcagcagcctcatccccgttgtctgcatcaatggatgacacaaat
ctagatggttcacctttccaaacgaaaaagaaacgaatggattcctccctccccccggtg
cagaagctggtggttcctgctgcagcgcccgtgtcaggaaaccgctccgtgtcctttagg
cctactctgactcctggaggaatgagccggcctctggacaggactccaagagatacgcct
acacgacaatcaccacaactacctgaagcaaccccaggtccatctcaaagcacaatgggt
tccagtggcccaacctatcctttgtccagcacgcctgcagccagcagcgtgagctctgga
ggcggaaagatgaagagagagaggaccactgcacgaccttcatctaaacgcgctgatgag
gaagaggtggctgaggtgccagaccttccaaccatttcacttcccatcaacacctgcaac
atgcccaccttcagcttcatctcccctcttccacccctcaccaccatcagcaactccctc
aacgtcacgcctgtgactcccgctaaggaaacagtcaataaggagccaccaacagccttg
acacctccctgtgtaccttttacattttcctcccccattgtcaaagcaactgctgctagt
ccaccttccttttccccctcagctggattcacttttagtgcacctgtagcaaagttgggt
ccctccatgtcaaatgggaatctggccactcccatcacagcagcagtaaagccagcagca
agcaaaagcacagaggattttgaaggacctttcaaaccagccaagaccctgaagcagggc
agcgtgctggatcttctcaaagcacccggctttgcgtctcctgttgctcggacttcccaa
ggcccagacaacactccacagcagacctccacacaatccactgccccctcctcctccgct
accactaccacctcctccctctcttcttcaacagggtttggtgatttgttgaaagcccca
ccaggctggacctgtgatacctgcttggtgtcaaacaagttatcagacacaaagtgtgtt
tgctgtatgaccccgcagcccaactcctcctcatccaaatctatggacagtaaaccttca
gccatcacctcggttgggctcgagagcagcagcagctctaacaccacctccaccactaca
accaccacaggttttggcacagtgttctccaaacctgcaggaacttgggactgtgatacg
tgtcttgttcgaaacaaacctgatgcagtaaagtgtgtggcctgtgaaacggccaaacca
ggtacagggctcaaaccctcactgactcttccttctgccttctcagctgttaagactgta
tccacccccacagcccctgtttctacagggttcagtggatttggagacaaattcaaaaaa
cctgagggctcatgggaatgtgatgcgtgtatggtagtaaacaaagcagtggacacaaag
tgtgcggcctgccagaccgctaaaccaggagcttcagcagcagcagcctcttcttcagcc
agcagcgctccggtgtttgggttggcagacgcattcaagaagccagagggtgcctgggat
tgtgacgtctgtcttgtacagaataaggctgctgatttacagtgtgttgcctgtcaaaca
gccaaacctggagctaaggtggagcccaaagctttcggttcgtcttttggttcatcagtc
ggtgggacttcaggctcttctacctctacatctggaggttttaagtttggcacatcagac
agtacctctggctccggatctgggggtttcaagtttggaggctcattgtcggagtcgtcc
tcttcatcatcgggtggattcaaatttggagtgccatttggaagctcctcatcagaaacc
acttctaaagacactactgcctcttcagggttcaaatttggcagctcatctgagggcttt
aaatttggcgttgcctctagtgatgacaaaaagtctgaccaacctgccgcagattctggg
tttaagttcggaaccagcggtgggatagtgtttgggactggatcatctaacacagaaagt
aacacctctaaaggcggcttcacctttggactgtcaaaacccgaagagaaaacatcagac
accaccaccaccaccacctcctcatcctctgttagtttcacacctccttcttcatctcaa
gagaagagtgacagcgtggcttcatcaaatgacacaacatcaacaaacaccaactcaatc
accaccacggctacgaccgctgggtcagtttttgcgagattgggcgagcggagtttggcg
accgccacgccacaagtgggctccacgtttggatccttacaggcagacaaagagccagct
gctcccacgtttacctttgggaagccagaggaaaagaaggaagctgctgccccctcggct
ccgtctgctttcctctttggtgctgctagtaaagatgcagatgctgcaccagtgccggcc
gcttcaggaggcttttccttcgggaagcccagtgctccaacagaacaacctccacctgca
ttcacttttggcaagcccgcagacaagagtgaaacatctactgcagaggccccaaagccc
tcttttacctttggacaaagtgctacagattcttctgctgctccaaaaccatcattttct
tttatggctagcaatcccaccaccaccaactccaccacctcgtcctcctccatcccaacc
ccaagtctgtttggtgctaccaccaccaccagcagcagcagcagttccactcaggctccc
gctccttctgcagcttccaacacttttatgttcggtcagcctgctgcaacctccactgac
gctccaccagctaaagcagccttcgtctttggccaaagtcaggacagccagccacctgcc
ccatcagctgcccctcttaactctactgcaaccccagccccagctcagccctttatcttt
ggtgctcctgcaagtgctgctgctcctcctcctgctgctgctgctcctccatcctttggt
tttggagcagcagcaccctctgctgcctcatcctcagctccatctgcagctcccgctcca
tttgcattcagctcagctccctctggtggatttggggccaaccagactccttcattcggc
tcatccttcggatctcccttcacagccacgtcttcccagaccccaaccttcggagccaaa
cccaacgccgcccctgtctttggacagcaggccaactccacacctgtatttggagccaat
actaattctgcaccagggggaggctttcagtttggaggagccagtgcatttggagccaca
aacaacgcttcaggtgtgttcactttcggagcaggatcagcagcatctcctgccccttct
gccaacgcctccattacaccccagtcaggagctcctggaggtggattcaattttgcacaa
ccccccactttcaatatcggatcaacgaaatccttcacccccactcctgctggacagcca
gcaattgctgggcgcaagatcaagacagctgtgcggcgcagaaagtag
DBGET
integrated database retrieval system
