KEGG   Larimichthys crocea (large yellow croaker): 104924578
Entry
104924578         CDS       T04659                                 
Symbol
tdp2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
  KO
K19619  tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lco03400]
    104924578 (tdp2)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     104924578 (tdp2)
SSDB
Motif
Pfam: UBA_4 Exo_endo_phos UBA_8 Exo_endo_phos2 TAP_C STIV_turret_3rd
Other DBs
NCBI-GeneID: 104924578
NCBI-ProteinID: XP_010736269
UniProt: A0A6G0HS43
LinkDB
Position
XIII:complement(40497768..40500309)
AA seq 361 aa
MASTSDSDKASVSNVEESRARLCDEFAAVAGTDSAVAQCYLAENEWEMERALNSFFEADM
ERVFAVEDSPERETSPKAKRAKVEEKSSGGCIDLTGDSPASAHKPSEEDDGKLSMISWNV
DGLDEVNLAERARGLCSFLVLYTPDVVFLQELIPPYVQYLKKRAVSYLIIEGGEEGYFTG
MMLKKARVKFLESEIVTYPTTQMMRNLLVAQVDFKGQKLTLMTSHLESCKGHAGERMKQL
QVVMQRMREAPNDVTVLFGGDTNLRDTEVAKVGLPSSVCDVWERLGKQEHCRYTWDTKAN
SNKTVPYVSRCRFDRIYFRPATKEGIPHLSPDHMALVGLEKLDCGRYTSDHWGIYCSFSS
G
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcttctacatcggactcggacaaagcgtcagtttctaacgtggaagaaagcagagct
cgtctctgcgacgagtttgctgcggtagcgggaactgacagcgccgtggctcagtgctac
ctggctgagaatgagtgggagatggagagagctttaaactcattctttgaggctgacatg
gagagagtatttgcagtagaggattctccagagagagaaaccagtccaaaagcaaagagg
gcaaaggttgaggaaaagtcttcaggaggctgtatagatctgactggagacagtccagcc
tccgcacacaaaccctcagaagaagacgacggtaaactgtcgatgatctcctggaacgta
gatggacttgacgaagtcaacctggcagagcgtgccagaggcctgtgctccttcttagtc
ttatacactccagacgtggtgtttctacaggagctcattccaccttatgttcagtacttg
aagaaacgggctgtcagctacctaatcattgaaggtggtgaagaaggttatttcactggg
atgatgttgaagaaggcacgagtcaaattcttggagagcgagatagtaacttaccccacc
actcaaatgatgaggaatctgctcgtagctcaggtggatttcaaaggccagaagctgact
ctgatgacgtcccacctggagagctgtaaaggccacgcaggggagcggatgaaacagctg
caggtcgtgatgcagaggatgagggaggcaccgaacgatgtcaccgtcctgtttggagga
gacactaacctgagggacactgaggtggccaaggtgggtctgccttctagtgtctgtgat
gtgtgggagcgactgggaaagcaggagcactgccgctacacgtgggacactaaagcaaac
agcaacaagactgttccttacgtcagtcgctgccgcttcgacaggatctactttcgcccg
gctacaaaagaaggcatcccacatctgtcccctgaccacatggctcttgtgggactggag
aagctagactgtggacgctacactagtgatcactggggaatctactgcagcttctcctct
gggtag

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