Larimichthys crocea (large yellow croaker): 104924596
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Entry
104924596 CDS
T04659
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104924596 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104924596 (nfrkb)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
104924596 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
104924596
NCBI-ProteinID:
XP_010736293
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All DBs
Position
XXII:complement(2235322..2243414)
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AA seq
1272 aa
AA seq
DB search
MDALTQMLTDPLDPKEENYGQITEECMLGNCTVNLPEDLLEDPEIFFSVMSESTWSEVLS
DSQRQHLRQFLPQFPNTNVAEQDSTVRDLFNNRDFNFGNPLHLAQKLFRDGYFNPEVVKY
RQLCGKSQRKRQLYCLQQYCHRLLKQILVSRKELLEFAVHNGLDFPPKKKLPSKTHAEMR
ETRVRRRLSRILKEVKSECGDGNASSDDDDISLWTPGPQSPSSPTPTVSLRVLPSLSTLD
MKTNEKIELGEQDLKVMLQNHREKRKRQPDHPDMMTSDIHLGDILSRTNIGRKGTVPLFD
LSLPKRKIKDERRKKKMRTIKVESEDPCESLTPSDTPSAPPANIINSLPDPPSAPLPNIK
EEIVEECQSSPVVVEEMAVSFFSLLETILKAEHLSSTSTLEDKVHMWQSSPASSLNVWFS
SVPCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFSDESQQWRWIGPTQDTEKDLSAL
CQLWLDSKDLVVKTENEDMLEITSPAPRVSTDYVVRPSTGDERQVFQIQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRSRS
QEEFERIHQAQAAAAKARKALQLKPKPASKPKAGSKDGGSKIPGCLEAGQDIGSNPMSPT
PTTPTINTPGTPKSPLPCTATTPTKTGVPDTIKSSPGVLLVSPPSLPQLGAILPSSQAGP
PASQPVTSQNAARIVSHLAAGSLPQVRVVSSHPGLSSLAGSQQATLVHQTSHQIRMPVSV
AAKGISQAVVSVPLRSQSASSPLQVTTTQSVSAVAKPQTGSPGSPANNPASPAVLQGVAS
PNIKQVSITGQLGMKTSGGAGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITPDM
MATLAKSPVATVKLTPDFLSTASSGSKSISATLHVTPPHPSPSSASATSCVGEVQTTKAG
STLLKAAGDTAIRLMPTLAVTVGDQKSRNFTTVSSPDKSGATIRIMPGLGVIPQKQGQTI
TMTTTTGSKTLTASTCANVVTMAASVVAGAKGITVAPGVSGSPLTLGTATATVRQVPATV
VTTQTGKLPTRITVPLSVLNQPLKSKSVVTTPLVKGSLNTNISTLGRNIILTTMPAGTKL
IAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQHMATGSPKSVSTVVVTTAPSP
KCAPDPPPAPQQ
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcacccagatgctgacagaccctctggaccccaaagaagaaaactatgga
cagataaccgaagaatgcatgctggggaactgtacggtgaacctcccggaggacctgctg
gaggatcctgaaatcttcttctccgtgatgagcgaaagcacgtggagcgaagtgctgtcc
gattcccagaggcaacacctccgtcagttcttgccacagtttcccaacaccaacgtggcg
gagcaggacagcaccgtcagggacctgttcaacaacagagactttaacttcgggaatccc
cttcatctcgcgcaaaagctgttcagagatggttacttcaatccagaggtggtcaagtac
agacagctgtgcggcaagtcccagaggaagcgacagctgtactgccttcagcagtattgc
cacagattgttgaagcagatcctcgtctccagaaaggagctgctggagttcgcagttcac
aacggcctggactttccacccaaaaaaaagctaccgtccaaaactcatgctgaaatgcgg
gaaacgagggtgagaaggagactgagtcgtatattgaaggaggtcaaatcagagtgcgga
gacggcaatgcttcatctgacgacgacgacatatcattgtggactccaggaccgcaatca
ccttcctctccgacacccaccgtctcgctcagagttcttcccagcctctccacactagac
atgaagactaatgaaaaaatcgaactgggggagcaggatttgaaagtcatgctgcaaaac
caccgggaaaagagaaagcgacaaccagaccatccagacatgatgacctctgacatccac
cttggagatatactctcaagaacaaatattggtcggaaggggacagtgccgctgtttgat
ctgtctctgcctaagaggaagataaaagacgagagaaggaaaaagaaaatgaggacaata
aaagtggaatctgaagatccctgcgaaagcctcacgccttcagacactccatcagctccg
ccggcaaacatcatcaactccttgccggacccaccatctgctccactgcccaacatcaag
gaggagattgtggaggagtgtcagagcagtccggttgtagttgaggaaatggctgtgagt
tttttcagcttgttggagaccatcctaaaggcagaacacctctctagcacttcaacgttg
gaggataaagttcacatgtggcagtcgtctccagccagctcactcaacgtgtggttttca
tccgtcccttgttggtcggacttggttcttcaggcgctgcagtttctcgcaggagagact
aaagatggcatgatggcacttcctagtggcttttcaccatttgtggagttttcagatgag
tctcagcagtggaggtggatcggtcccactcaggatacagagaaagatctcagtgcactc
tgtcagctgtggctggactccaaagatttagttgtcaagacagaaaatgaagacatgttg
gagattacttctcccgcaccaagagtttctactgattatgtagtgcggcccagcactggg
gatgagagacaagtctttcaaatccaggagcagcagcgatacaaccagccacataaagcc
ttcaccttcaggatgcacggctttgagtctgtggtcgggcccgttaaaggagtgttcgac
aaagagatgtctctcaacaaagccagggagcacacgctgctccgctcggaccggccgcca
tacgtcaccattctctctctggtgcgggacgctgcagccaggttacccaatggagaagga
acaagagcagagatctgtgaactgttgaaggactcacagtttcttgctccagacgtgacc
agtgcacaggtgaacacggttgtcagcggggctctggatagacttcactatgagaaagac
ccctgtgtgaagtacgacattggccgcaaactctggatttacctgcaccgcagtcgcagt
caagaggagtttgagaggatccaccaggctcaagctgctgctgcaaaagcaagaaaagcc
ctacagctgaaacctaaacctgcatccaagcctaaggctggaagtaaagacgggggtagt
aaaatccctggatgtctggaggcaggacaggatataggttctaatcccatgtcaccaacc
cctacaacacccaccataaacacacccggaacccctaaatcacctttaccctgcacggcc
accacaccaacaaagactggagtcccggatacaatcaagtccagcccaggcgttctcctt
gtgtctcccccctcgttgccccaactgggagccatcctacccagcagtcaggccggtcca
ccggcctcgcagccagtcacgtcccaaaacgcggcccggatagtgagtcacctggcggca
ggctccctccctcaggtgcgggtcgtctcttcacaccctggtttgagttctttggcggga
agtcagcaggccacgctggtacatcagacctctcaccagatcaggatgcctgtgtctgtg
gcagccaaggggatttcacaggcagtggtttccgtgcctctgaggagtcagtctgctagt
agtccactccaggtgacaaccactcagtctgtgtctgctgtagccaaaccacaaactgga
tcacctggtagcccggcgaacaacccggcctcccctgctgtgctgcagggagtcgccagc
ccaaatatcaaacaggtttccatcacaggccagttaggaatgaagacttcaggaggagca
ggaattccaataacggctacaaatctgcgcatccagggtaaagacgtcctacgtcttcca
ccatcctccatcaccacagacgccaaaggtcaaacggtgctgcggatcacccctgacatg
atggcgacgcttgccaaatccccagttgcgaccgtcaaactcaccccggacttcctgagc
accgcctcctcaggcagcaaaagcatatcagccactctccacgtgacgccgccccaccct
tcaccttcctcagccagtgccacatcctgcgtgggggaagtacagactaccaaggcaggc
tccaccttgctgaaggctgcgggagacacagccatacgcctgatgcccacattggccgtc
actgtgggcgaccagaaatctaggaacttcactactgtgtcctccccggacaagagtgga
gccaccatccggataatgccgggcctcggcgtcattccgcagaaacagggtcagaccata
acaatgacgaccaccaccggcagcaagacgctcacggcgtctacgtgtgctaacgtagtg
accatggctgccagtgttgtggctggtgctaaggggatcactgtggctcccggagtctca
ggttcacctctgacattaggaacagctacagccactgtgcggcaggtccctgctacagtg
gttactacacaaacggggaagttacctacacggatcactgtgcccctctctgtcctcaac
caaccactgaagagtaagagtgttgtgaccacgccgctagtcaaaggaagccttaacaca
aatatcagcactctgggcaggaacatcattctgaccactatgcctgctggcaccaaactg
attgcagggaacaaacccgtcagttttgtcacagcacaacagttccagcagcttcagcag
caaggacaggccacgcaggttcgcatccagactgttcaggcgcagcagctccagcagcac
atggcaacaggctccccgaaatctgtttccacggttgtagtcacaacagcgccttcgccc
aaatgtgcacccgatcctccgcctgcacctcaacagtga
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