Larimichthys crocea (large yellow croaker): 104924723
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Entry
104924723 CDS
T04659
Name
(RefSeq) M-protein, striated muscle
KO
K24495
myomesin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104924723
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104924723
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
104924723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
Ig_J
DUF4249
Herpes_gE_N
DUF4959
DUF1570
PMR5N
Motif
Other DBs
NCBI-GeneID:
104924723
NCBI-ProteinID:
XP_027143048
LinkDB
All DBs
Position
XIII:32623142..32680201
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AA seq
1501 aa
AA seq
DB search
METRMVMRREQEEQSSQMSHSMQLSSQIKKKTFTSSDEEPSYSDFYPIIPADLMSVKEIL
NMDDLPRHRTWEILKETQAADEEYHRDKWTRFGNEVEKVEIDVIRNQRVLRTHVDRLALR
KQAKKKASAHMKYLELLSQKAPDFTIPLRAHMVWEGMTVKLTCTIQGCPPPKVTWYKDGQ
LLRMSDQPWNYSLQQKFGLNSLEIRRCSPDDAGEYKVVARSPLGEAMTFGTLVVNSYQGA
VAGSEHSQTPALTLEPEAQFGIAFPPTWVKEGNSLTLQCTFTSALLPFQQDVSWFRDGIQ
LHQSSNVEITTVDSKTSITLKAAHKEHEGVYTVRLRTWDDFQEHSAFVYVQDASAAVSGG
PASPLDVQVSDVNKDYVFLTWQPPSADGASHVLGYYVEKCDVSQGEWVRCNVHTQKMCHY
PVFGLKEGTLYQFRVRAVNQAGASRPSKATEPVLTADPLEHTRTTVVNVDIGWTITITKD
ELEGHVKAPFPPTDVHACEVSDTYVVLSWTEPEPRGREPLTFYVERSLAGNSSWELASLD
MVVNSPRFPVFDLVKGKQYCFRVRSINKYGVSDPSEPSEPISLGKPQAVPASPHSVMAIS
DTDTSVLLQWKEPKDKDDILGYYLYYNETGKQDWNTVNNKPFTKTRFIVHGLKTQGEYVF
RVKSVSRAGNSSYSDQSQAILVKSAIHVPSAPSAIAMLLCTGSEMVLGWKAPARNGGAHV
RGYYLDQREKGMKTWREVNVKPAKERQFKVCNLSAGHFYQFRVYAANMAGVGKPSEASEA
FLCEKWTMPEPGCPYDLELREVRKSSLVLLWAAPLYEGSSPVTGYFLEISEGDQSDDWTA
LNEKPVSDTHYKVSGLQAGQTYRLRVSAVNEAGVGCASLPTEPVTAQTQPGTKNVEIGVD
NDGFIFLSYQADKMNDTSEFLWSKNYTEAIDAGRAQAETKKNGSVLTFKDASEEDLGLYT
VKMSDNSTLSSSYDFTAEDLERLKELSWQVRNPLIALKSGWQVEVSEKGGVRLWLETESL
SDAAELRLIFNDREISSTPMSCSSTELILVFMTSHYESKTAVSVLMNILEAGGKLRLWRK
DEEQVCEEAERSSELREEKEHTSANVHCNACLQHRKINFDKAKGLVEILFEQLSREDEGS
YTAQLRDGRAKNQFTLVFVDQKFRQTLALANEKLRDIKRKAGPYFQDFLSWSVNEDCELI
MKCKVTNTKKDTSLKWFKEGVAVSQVVYEQSSGVSTLTIPQVTKKEAGSYRAVVSDGRGE
DVSTLELLDDEYDKLLQQLSKQCAMSASPLRIQSTAEGFKLYCSFKYYINYLKTSWYFKE
KRIDQGTRIKPGSSMQKVWIEIVNPTENDKGKYILEMFDGTETHKRYLDLSGQAFADALL
DYQRLKQAAVAEKNRAKVTKGLPDVVAIMEGKSLCLTCYIDGDPAPQIFWLRNDKELIDP
NLYTVTNEQKCSTIDIHKVRLEDSGKYSILVRNKFGSEAACVTVSVYRHGEKPPANAVEM
G
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaggatggtgatgcggcgagagcaggaggagcagtcatcccagatgtctcac
agcatgcagctgtcctcccagatcaagaagaaaaccttcacttccagtgatgaggaaccg
tcctactctgatttctatcccatcatccccgctgacctgatgtccgtcaaggagatcctg
aacatggacgacctcccccgccacaggacatgggaaatcctgaaggaaactcaagctgcc
gatgaagagtaccacagagacaagtggaccaggtttgggaatgaggttgagaaggtggag
atagacgtgatcaggaaccagcgtgtgttacgcacacatgttgacagactggcccttcgt
aagcaggcaaaaaagaaggcatctgcccacatgaagtacctggagcttctcagtcagaag
gccccagactttacgatccctctgagggctcacatggtctgggagggcatgacggtcaaa
ctcacatgtaccatccagggctgtccacccccaaaggtcacatggtacaaggatggccag
ctcctgagaatgtccgaccaaccgtggaattacagtcttcaacaaaaatttggtcttaac
tccctggagatcagaaggtgctctcctgatgatgctggcgagtataaagtggtagccagg
agtcccctgggtgaagctatgacttttgggacgctcgtggtgaactcatatcaaggagcc
gtggctggttcagagcactcgcagacccccgccttgacgctcgagccagaagcccagttt
ggcatagcattccctccaacatgggtgaaggagggtaacagcctcactctgcagtgcacc
ttcacctcagctctgctgcccttccagcaggacgtcagctggttcagagatggcattcag
ctgcatcagtcgagcaacgtggagatcacgacagttgacagcaagacctccatcacttta
aaggctgcacataaggagcatgaaggtgtctatactgtccgcctaaggacctgggatgac
ttccaggagcacagtgcttttgtctacgttcaagatgcatcagctgcagtgtcgggaggc
cccgcttctccactggacgtccaggtatctgacgtcaacaaggactacgtctttctcacc
tggcagccacccagtgctgatggagcttcacatgtgctgggttattatgtggaaaaatgt
gacgtcagtcagggtgagtgggtgcgctgcaatgttcatactcagaaaatgtgccactac
ccggtgtttggccttaaggaaggaactctgtaccagttcagggttcgtgctgttaaccag
gctggagcaagtcgcccctccaaggctactgaacccgtcctgactgcagaccccctagaa
cacaccaggaccacagtggtcaacgtcgacataggatggacgatcaccattacaaaagat
gaacttgaaggtcacgtcaaagctcctttccctcccacagacgtccacgcctgcgaggtg
agcgacacctacgtggtgctcagctggaccgagcctgaacccagaggcagggagccgctc
accttctacgtggagcggtccctggcagggaacagtagctgggagttggccagtctggac
atggtggtgaactctcccagattcccagtgtttgacctggtcaagggcaagcagtactgc
ttcagggtgcgctccatcaacaagtacggtgtcagcgatccctctgagccgagtgaaccg
atctccttgggcaagccacaagctgtgccggcttcgcctcactccgtcatggccatcagc
gacacagacacgtctgtgctgctccagtggaaggagcccaaagacaaagacgacatcctg
ggctactatctgtactacaatgagacgggtaaacaagactggaacactgtcaacaacaag
ccttttaccaaaaccagattcatagtccacggcctcaaaactcaaggggaatatgtgttc
agagtgaaatctgtgagccgagcaggaaacagcagctattcagatcagtctcaagccatc
ctcgtcaaatcagccattcatgttccttctgctccctctgccatcgccatgctgctgtgc
accggatcagagatggtgctgggctggaaggcccctgcccgtaatggtggagcccatgtg
cgtggatactacctggaccagagggagaagggcatgaaaacatggagagaggtcaatgtc
aagcctgccaaagagaggcagtttaaggtttgcaacctgtctgccggacatttctaccag
ttcagagtgtacgctgccaacatggctggcgtcgggaagccctctgaggccagcgaagct
ttcctgtgtgagaaatggacgatgcccgagccaggttgtccttatgacctggagcttagg
gaggtgaggaaaagctccctcgtgctgctctgggcggctccattgtatgaaggaagcagc
cctgtcactggttatttcctggaaatcagtgagggcgaccagtcagacgactggactgct
ttgaatgagaagccagtctctgacacacattacaaggtgtcaggtcttcaggcaggtcag
acctaccgtctccgtgtgtcggctgtcaatgaggctggagtgggttgcgcttccctgcca
actgagccagtcacggctcagacccaaccaggcaccaaaaacgttgagatcggagtggac
aatgatggtttcatatttctgagttaccaggctgataagatgaacgacacgagcgagttc
ctctggagcaaaaactacacagaggccattgatgccggaagagctcaggcagaaaccaag
aagaacgggtcagtcctcacattcaaagacgcctctgaagaggatctgggtctctacacg
gtgaagatgagcgacaactcgaccctgtcatccagctacgacttcactgctgaagacctt
gaacgactcaaagaactcagctggcaagtcagaaatccactgatagctctgaagtccggc
tggcaggtggaggtttctgagaaaggtggggttcgtctttggcttgagacggagagtctg
agtgacgctgctgaactccgcctcatctttaacgacagagaaatctccagtactccaatg
tcttgtagctctacagagcttatcttggtgtttatgaccagtcactatgaatccaaaaca
gctgttagtgttttaatgaacatcctggaggcaggcgggaagctgaggctgtggagaaaa
gatgaagagcaggtgtgcgaggaagcggaaaggtcgagtgagctgagggaggagaaggag
cacacatctgctaatgtgcactgtaatgcttgtttgcagcaccgtaagatcaacttcgac
aaggccaaaggtctggtggagatactgtttgagcagctctctcgggaggacgagggctca
tacacggctcagctgcgggacggccgcgccaaaaaccagttcactttggtctttgtggat
caaaagtttcgtcagacgttggccctggctaatgaaaaactacgtgacatcaagagaaag
gctggaccttatttccaggacttcttatcatggagtgtgaatgaggactgtgagctcatt
atgaagtgtaaggtgacaaatacaaagaaggacacgtctctcaagtggtttaaagaaggc
gtggcggtgagccaagttgtgtacgagcagtcgtcaggggtcagcacgctcaccatccca
caggttacgaagaaagaggcaggttcgtacagagctgtggtgtcagatgggagaggagag
gatgtcagcaccttggagctgctggatgacgagtatgacaagcttctccagcagctgagt
aaacagtgcgcaatgtcagccagcccgctgaggattcagagcaccgctgaaggtttcaag
ctctactgctcattcaaatactatataaactacctgaagaccagctggtacttcaaggag
aagaggattgaccagggaaccaggataaagcctggcagcagtatgcagaaagtctggatt
gagatcgttaacccgacagagaatgataaaggcaaatacatcttggagatgtttgacggc
accgagacacacaaacggtatcttgacctttctggacaagcctttgctgatgccttgctg
gactaccagaggttgaagcaagcggccgtcgctgagaaaaatcgagccaaagtgacaaag
ggtcttcctgatgtggtagccatcatggagggaaagtctttgtgtctgacatgctacatc
gacggtgacccagcaccacagatcttctggctcaggaacgacaaggagcttattgacccg
aacctttataccgtcaccaatgaacaaaagtgcagcaccatcgacatccacaaggtcagg
ctggaagattctgggaaatacagcatccttgtgcgcaataagtttggctcagaggcggct
tgtgtgaccgtgagcgtttacaggcacggggagaagcctccagcaaacgctgtggagatg
ggttaa
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