Larimichthys crocea (large yellow croaker): 104924740
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Entry
104924740 CDS
T04659
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104924740 (trim59)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104924740 (trim59)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
Spectrin
Rootletin
zf-RING_10
MgrB
BAR_3_WASP_bdg
DUF5667
Motif
Other DBs
NCBI-GeneID:
104924740
NCBI-ProteinID:
XP_010736492
LinkDB
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Position
VII:18038951..18043860
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AA seq
429 aa
AA seq
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MDNLEEDLTCSVCYSLFSDPRVLPCSHTFCKTCLDNLLQASTNYSIWRPLRLPLKCPNCR
SVVELPPTGVEALPTNVCLRAIIEKYQSDSEPRPPTCGEHHRQPLNMYCVQDRQLICGLC
LTVGQHQGHTIDDLQVAFIREKQTPSRLLARLSERRWAQVCELGEQLEQEKTRCEDLVRQ
DRQEVNQFFQTLEAVLARKKQAYLQALDKASAEVARVYDPLIHKVKDLQEEQLDLVSLGS
SVEEEDSPLVFLEKVHMFRERVEEFITTPLPSVINLSVIPRAAEYLQQHWPAVTLGSLEE
APVPKLCCCTRCGSVDADGGKDQSDGWAQDLWCELRPTSSVVLLGLLLLLVALWVNPIGG
ASLGFSLVSHFSQFVHGLSSELITSVCDTAGSAYTVMEAAVERWSSHLCSVGETAVQQLA
ALFKTLTSQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctagaggaggacctgacgtgctccgtgtgctactctctgttctccgaccca
cgagtcctgccgtgctcgcacaccttctgtaagacctgcctggacaacttgctccaggcg
tcaaccaactattccatctggcgtccgctccgcctgcctttaaaatgccccaactgtcgc
agcgtggtggagctgccgccgacgggcgttgaagctctgcccaccaacgtatgtctgcgg
gccatcatcgagaaataccagagcgacagcgagccgcgacctcctacgtgtggggagcac
cacaggcagcccctgaacatgtactgcgtccaggatcgacagctgatctgcgggctgtgt
ctgactgtggggcagcaccagggccacaccatagacgacctgcaggtggcattcatcaga
gagaaacaaaccccatcacgactgctggccagactctctgagcgtagatgggcacaggtg
tgcgagctgggggagcagctggagcaggagaagactcgctgtgaggatctggtgaggcag
gaccggcaggaggtcaatcagttctttcagacgctcgaggcagtgctggccaggaagaaa
caagcctacctgcaggctctggataaagccagcgcggaggtggcccgggtttacgaccca
ctcatccacaaagtaaaggatctacaggaagaacagttggacctggtgtccttgggttca
tcagtagaggaggaggactcgccgctggtcttcctggagaaggtgcatatgttcagagag
agggtggaggagtttatcacaacccctctgccctcagtgataaacctctccgtcatcccg
cgggcagcagagtacctccagcagcactggcctgccgtgaccctcggcagcctggaggaa
gcgcccgtccctaagctgtgctgctgcaccagatgcggcagtgtggacgccgacggcggg
aaggatcagtccgacggctgggctcaggacctgtggtgcgagctgcggcccacttcttcc
gtggtgctcctggggctgctgctgctgctggtggcgctgtgggtcaacccgatcggaggg
gcgtcgctcggtttctctctggtctctcacttcagtcagtttgtccacggcctgagcagc
gaactgatcacatcggtctgcgacacggcggggtcggcgtacacagtgatggaggctgct
gtagaaagatggagctctcacctctgctcagtcggcgaaacagccgtccagcagctggct
gccttattcaagactctgacgtctcagtga
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