Larimichthys crocea (large yellow croaker): 104924760
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Entry
104924760 CDS
T04659
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lco03009
]
104924760 (utp20)
Ribosome biogenesis [BR:
lco03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104924760 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
FANCI_S2
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
104924760
NCBI-ProteinID:
XP_019108872
LinkDB
All DBs
Position
XX:14680252..14699424
Genome browser
AA seq
2822 aa
AA seq
DB search
MKIKSKSSYHKSENTYRFLTFAERLANVNIDVIHRIDRTGSYAEEVETYFSEGLTKWRDL
NLTEHFTTFLKEVSSKSQSFNLLVFHQKSIVESLKTHLSVKDSLAYQPLLDLVVQLARDL
QTDFYPHFPDFFILITSLLETKDTEVLEWAFTCLSYLYKYLWRLMVKDMSNIYSLYSTLL
EHKKEHIRNFAAESFSFLMRKVPDLEALLSYVFSDLQQHPDKAEGAGQLLFEMCKGVRNM
FHSCAANAFPIALRKLGPTTSPGVSLPWDTVKDALDHMAQAAANHVDREHLLVLWESLQV
SVVEVLGVMEAKGEEADQATEQLERLLFILHTLVSHRDGAKITKPEAVCQAVLRLTQSSS
LSASCSRLLLQITSSLLLGENVTLSNALIQETVQKVFGSTMGQDLILEFTKEMFTMKQFE
QLFLPTLLRFTAGLFSCGDPLSRHCGLDALVSLILAKAPPPTDGSMAFETYPLLFTGQTT
GRVFSSKEAGTTSEQPAVPELVLSLIRFSDGENQSITDLSLPWAALVLLPHLRPLSPASV
VPAVTALLNHLLREIETDKLGKAGLFVARQAMSCLLTLDGSAELLSLITVDKINSILRKF
PTDLSALLLGDLYYTRLSLSGVSEHLSHNALLELYQILHANLSSNISKIRLLTLRILSQF
EAELPPQAEGEENVEVQPVFAVCLQAELVPASVQDYREKLLHLRKLRHDLVQRSLPQGPA
ATFQQVPLRYLIAMLFINFRPLWDAVIELLVTHARGMDNKDFWGVYHEHLEMVAGLAEKE
LQEDGEDDDDDEEGLGLEGEPGCDVIESGDVGVLFLEQLKLTSDPNERTDFPNFRSLLWR
SMTQFPERVEPRSRELSPLLLRFIRNEFYPADLLVAPTQDLRKKNDAALEESGMAVEEEE
DRDEEEQEEERGKQQRKALPRRAAAKQLITHLKVFAKFSNPRSLYLESSLSELYNELLCH
QDQQIQRVALECVLTYKDPNIVPYKENLEKLLDDKHFKEEIVHFNISEETGVVDASHRTK
LIPLLMRILFGRLRSKAGSKFQGKASAASRSSIILRFLAGCQAEELGIFIDLLLQPVCHH
SQGSCLAAVDRAIAETDLCAVLPLGRQHSLLNIINVVIHKLGHLIDIYLPKVLQILLCIT
ASVSTILDNRDQLRSGCISPLKNLRRFGILRIQDFFDAFDSYSFSPDELDAVFQAVVWPQ
VCRLPTESTYSPTPLLKLIHVWCKNARYFPLLAKQRTNQPECDVLLNVFALLSAKKASPV
TIAMVMDIAESLATTEDFVASEAETELSVNGCVFPKPQEGAADSLRQGSRLLLPHITTLL
QYLSGVVRNTDRLKKKKFRAQVAKELNILSKVSRFVSDKEQSSMLISLLLPYLQKAHNPQ
ETEIDILATVQNLLRQCVQPSAFLRPLSKLFSIIHNKLPRQALTNVFQTLSDLEPSLTYI
TDLATKLNAFDSRHLDEIYFDVRLTAFQKATKRVKEMTTLDLDYISTIIHNCFHTFEIGD
MSLADNATLCLSAVITQLTVVKAGEQLYKDIIQHTILDAVHKGLRSKTESVQHEYTTVLA
CLVKTFPSKKEFRDLVQLTNYNDLESDFFEHMKHIQIHRRGRALRKLAKQLTEGQVVMTP
RSLQNYIMPYAMTTLLDEKMLKHENMISASVEVVGAVCRRLTWSKYLYYLKHFVHILQTA
QADQKLAVSLLVTVLEAFHFDHETLSREMEAAKAREAGSVAVDADDEEQLAADELDTSDD
EETMEVDSKTAPSDVPMETDTTSGEKDVVSKEAVATGAKGPAAPKSAAISSGLPQSKEEL
ETLISTIHQTVNNSVLPRLHKCLNAKVKRDEEHKAVKSKDVKEEEVVRVPIAFAMVKLMQ
TLPPHIMEANLPGILIKVCVLLRNRFQEIRDVARGTLVKIIETLGRRYLHYLLKEMQSVL
VKGYQVHVLTFTVYQLLSVLRPTLKSGDLDPCMNMLIDIFNNELFGAVAEEKEVKGIVSK
LMEARHSKSMDSYEFLAQFCSKESITKFILPLKEILETSSSLKVCNRVGAVLRRLVLGLL
VNEGMTSQDILLLCHGLVSESLPLLTKRDRDKASAKPPPDPRLPPPSCLLLPPTPKRGGQ
KAPVSSRTNMHILVDAGLKLLHLSLKKSKVTSSEASTLEMLDPFVALLLDCINSMHVKVI
TEALVAFTWLLKFPLPAVAQNAGQLTKQLFVLLKDYSKAGAARGENYHLVQNCFKAITIL
VKNVKSNKISETQLQVLLGYAEEDIYDQSRQATAFGLLKAILSRKLIVPEMEEVLKKVAR
LSVTGSNAMIRIHCRQIYLKYLLDYPLGRKLKVHLDFVVSQLHYEHDTGRESVLEMLAYI
FQTFPKNLLLNHSGLFFAPLALVVVNDDSARCKKMAAMAIKALLIQLDLNHQNTLFSLVN
TWLKAEKTSLRRLGAQMCGLFVEVEEEKFARRLDDLLPLLEKEINPDKYEDIEEEQEEKG
ADRLLFTFLTLITKLSKHCSLLELSKPHHDTLCRIWGHIEAHLRYPHCWVWLTASQLFGQ
LFAAHQAEQLIAVWRGEAGDATPPPPATAFIANNLDKKMRELALSFCHQLQSKFLDTASG
EQVIKNLLFVGKVIYLLSPESDIPSPQEEVKEEEEEEEEEQTENGNEEDEEEGEEKEKEE
EEEEEEDDKDDRPPSLMWLIKKLSLMAKREAAYTPKVPLKRTCVFKFLGAIAMDLGKERL
GPYLTTIITPLYRELDSTYADQNPTLKNLAQELIELLKKQVGLERFSLAFSAVQKEFSQR
RAARKRHRAMQAVANPDIAAKKKLKKHKNKIEAKKRKIEFLRPGYKAKKHRSHALKDLAM
VQ
NT seq
8469 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaatccaagtcttcgtatcacaaatctgagaacacctacaggtttctcacc
tttgctgaaagacttgccaatgtcaacatcgatgtcatccatcgcattgacaggactgga
tcttacgcagaggaagtagaaacgtacttctcagagggactgacaaaatggagagacctc
aacttgacagagcatttcactacatttctgaaagaggtgtccagcaaaagccagtcattc
aacctgctggttttccatcagaagtcgatagtggagagtctgaagacgcacctgagcgtc
aaagacagtctggcctatcagccgctgctggacctcgtggtgcagctcgccagagacctg
cagaccgacttctacccgcacttccctgacttcttcattctgatcacctcgctgctggag
accaaagacacagaggtgctggagtgggctttcacctgtctctcttacctctacaagtac
ctgtggaggctcatggtgaaggacatgagcaacatctacagtttgtacagcacgctgctg
gaacacaagaaggagcacatccgcaattttgcagcagagagcttctctttcttgatgaga
aaggttccagatcttgaggccctgctgagttatgtgttctcagatctgcaacagcacccc
gacaaggcagagggagcgggtcagctgttgtttgaaatgtgcaaaggagtcagaaacatg
tttcactcctgcgctgcaaatgctttccctatagctttgcgtaagctcggacccacaacc
agcccaggagtctctctgccgtgggacacagttaaggatgctctggatcacatggcccag
gcagcagccaatcacgtcgacagagaacacctcctggttttgtgggagtccttacaggtc
agtgtggtggaggtcctgggtgtcatggaggcaaaaggagaagaagcagaccaggcaaca
gagcagctggagaggctgctgttcattctccacacgctggtgtctcaccgggatggagcc
aagatcaccaagccggaggctgtctgccaggcggtgttgcggctgactcagagctcgtct
ctgtcggcttcatgttcccgtctactcctccagatcacctcctctctgctcctcggggag
aacgtcactctgtccaacgcactcatccaggagacagtccagaaggtgtttggcagcaca
atggggcaagacctgatactcgagttcaccaaggagatgttcaccatgaaacagtttgaa
cagctcttcctccccaccctattgcgcttcaccgctgggttgttcagctgtggcgatccc
ctgtctcgccactgtggcctggatgcactggtcagtctgatccttgccaaagccccaccc
cccacagacggctccatggcctttgaaacctacccgctgctcttcaccggacagaccaca
ggcagagtgtttagcagtaaggaggcaggtacaacgtcagagcagcctgcagtgccagag
ctggtgctgtctctcatcagattttctgatggggagaaccagtccatcactgacctgtca
ctgccctgggccgccctggtgcttctgccacacctcaggcctctctctccagcgagtgtc
gttcctgctgtgactgctctcttaaaccacctcctgcgtgagattgagacagacaagctg
ggaaaagctggtctgtttgtagcgaggcaggccatgagctgcctcctcactctggacggc
tctgctgagctcctctctctgatcaccgtggacaagatcaactcgatcttacggaagttt
cccacagacctgtctgctctgctgctcggagacctgtactacacccgtctgtcactcagt
ggggtttcagagcatctgtcccacaatgcactgctggagctctaccagatcctgcatgcc
aacctctcctccaacatctccaagatccgcctgctgactctgaggattctctctcaattt
gaggcggagctccctccacaggccgagggtgaggagaatgtggaggtgcagccggtgttt
gcggtttgcctgcaggctgagctggtgccggcttcagtacaggactacagggagaagctg
cttcacctccggaagctgagacacgacctagtgcagcgcagtctgccgcaggggccggca
gccaccttccagcaggtgcctctgcgttacctcatcgcaatgctgttcatcaacttcagg
ccactttgggacgctgtcattgaacttcttgtaacccatgccagagggatggacaacaag
gatttctggggggtctaccatgaacatctggagatggtggcggggctggctgaaaaagaa
ttgcaggaggatggcgaggacgatgatgatgatgaggaagggttgggcctcgagggtgag
ccgggctgtgatgttattgaaagcggggacgtgggggtgttgttcttggagcagcttaag
ttgacctctgaccccaacgagaggacagactttcccaacttccgcagcctgctgtggcgc
tccatgacccagtttcctgaaagagtagaaccacgcagccgggaacttagccctctgctg
ctcaggttcatcaggaatgagttttatcctgccgacctgttggtggctcctactcaggac
ttaaggaagaagaatgatgctgctctggaagaatctgggatggctgtggaggaggaggag
gacagagatgaagaggagcaggaggaagaaagaggcaaacaacagaggaaggcacttcca
aggagagctgctgccaaacagctgattacccatctgaaggtattcgccaaattcagcaac
cctcgatctctgtatctggagagcagcctcagcgagctctacaacgagttgctgtgccat
caggaccagcagatccagcgagtggcgctggagtgtgtcctcacctacaaagaccctaac
atagtaccatacaaggagaatcttgagaaacttctggacgacaaacactttaaagaagag
attgtccatttcaacatttccgaggagactggagtggttgatgcttcacacagaaccaaa
ctcattccactgctcatgaggatcctttttggtcgcttgcgcagtaaagcaggcagcaag
tttcaggggaaagcgagtgccgcctcccggtcctccattattctgcgtttcctggcaggt
tgccaggctgaagagctgggaatattcattgacctgctgctgcagcctgtgtgccatcac
agccaaggttcctgcctggcagcggtggacagagcaatagctgagacagatctgtgtgcc
gtcctgccgctgggccgtcagcacagcctgctgaacatcatcaatgtggtgattcataaa
ttgggccacctcatcgacatctacctgcccaaagtgcttcaaatactgctgtgtatcacc
gcctctgtgtccaccatcctggacaacagggaccagctgcgatcaggttgcatcagtcct
ctgaagaacctgagacgattcggcatcctgaggatccaggacttttttgatgcctttgac
tcgtacagcttcagtccagatgagctggacgctgtctttcaggctgtggtctggcctcag
gtgtgtcgtctgcccacagagagcacttactccccgacccctctgctgaaactcatccat
gtgtggtgtaaaaatgccaggtacttccccctcttggccaagcagaggacaaaccagcca
gagtgtgatgttctcctcaatgtcttcgccctcctctcagccaagaaagcttccccagtg
accatcgccatggtaatggacatagctgaatctctagcaaccactgaagactttgtcgcc
tcagaggcggagacagagctgagcgtcaacggctgtgtgttcccaaagccacaagagggc
gctgcagactctttaagacagggctccagactgttgctgcctcacataaccaccctgctg
cagtacctcagcggggttgtacgcaacaccgacagactcaagaagaagaagttcagggca
caggtggccaaagagctcaacatcctctccaaggtcagtcgatttgtgagcgacaaggag
cagagctcgatgctcatcagcctgctgctgccctacctccagaaagcccacaatcctcaa
gagacagaaatcgacatcctggccacagtgcagaacctgctgcgtcagtgtgtgcagccc
tccgccttcctgcggccgctcagcaaactcttctccatcatccacaacaagctgcccaga
caggcccttactaatgtcttccagactctgtcagatctggagccttccctcacgtacatc
actgatttagcgacaaagctcaacgcatttgacagtcgacacttggatgagatctacttc
gacgtgcgtctgacggctttccaaaaagccaccaagcgagtcaaagagatgaccacactg
gacttggactacatcagcaccatcatacacaactgcttccacacttttgagatcggcgac
atgtcactggcagacaacgccaccttgtgtctgtctgcggtgatcacccagctgacggtg
gtcaaggctggagaacagctctacaaggacatcatacagcacaccatcctggatgctgta
cacaagggactacggagcaagacagagagtgtgcagcatgaatacaccactgtactggcc
tgcctcgtgaagaccttcccctccaagaaggagttcagagacctcgtgcagctcactaac
tacaatgaccttgagtctgacttctttgagcacatgaaacacatccagatccaccgtcga
ggtcgcgccctcaggaaattggccaagcagctgaccgagggtcaggtggtgatgacccct
cgttctctccagaactacatcatgccgtacgccatgaccacgctgctcgatgaaaagatg
ctcaagcatgagaacatgatatcagcatcagtggaggttgtgggcgcagtgtgtcgtagg
ctgacctggtcaaagtacctctactacctgaaacacttcgtccacatcctgcagacagcg
caggcggatcagaaactggctgtcagtttgctggtcacagtcctggaggctttccacttt
gaccatgagaccctcagcagagaaatggaggctgccaaagccagagaggctgggagtgtt
gcggtcgacgcagatgatgaggagcaactcgcagctgacgaattggacacaagcgatgat
gaggagacgatggaggtagacagtaagaccgctccatccgatgttcccatggaaacagac
accaccagtggagaaaaggatgtcgtctcaaaggaagcagttgccactggagccaagggg
ccagcagctcctaaatctgccgcaatatccagcgggctgccgcagagcaaagaggagctg
gagactctgatcagcaccattcaccaaacggttaataacagcgtgctgccacgtttgcac
aagtgtctcaatgcaaaggttaagcgtgatgaagagcacaaggcagtgaagtcgaaagac
gtcaaagaagaggaggtggtgagggtacctatagccttcgccatggtcaaactgatgcag
actctgcctccacacatcatggaggccaacctgcctggtatcctgatcaaggtgtgtgtg
ttgctgaggaaccgcttccaggagatccgtgacgtggcgaggggaactctggtgaagatc
atcgagactttaggccgcaggtacctgcattacctgctcaaagagatgcagtcggtcctg
gtcaagggctaccaggtccatgtgctaacattcacagtataccagttgttgtcagtcctc
cgtccaaccctgaagagcggtgacttggacccatgtatgaacatgctcatcgatatcttc
aacaacgagctgttcggtgctgtggctgaggagaaggaggtgaaggggatcgtctccaag
ctgatggaggctcgacacagcaagagcatggactcctacgagtttctggcccagttttgc
agcaaggagagcatcaccaagttcatattgcccctgaaggagatcctggagacttcatcc
agtctgaaggtgtgtaatcgggtgggtgctgtgctgcggcgactagtcctaggtctgcta
gtcaacgaaggcatgacctcacaggatatcttactgctttgccacggcctggtcagcgag
agtctgccgctgctcaccaagagagacagagacaaagcctcagctaagcctcctccagac
cccagactgccccctcccagctgcctgctcctgcctccaactcctaagagagggggtcag
aaagctccggtcagcagccggaccaacatgcacatcctggtggacgctggccttaagctg
ctccacctgagtctgaagaaatccaaagtgacatcgtccgaggcctccacccttgagatg
ctggatccttttgtagcgctgctgcttgactgcatcaactctatgcatgttaaggtgatc
acagaggctctggtggcattcacttggctgttgaagttccctctgccggcagtggcgcag
aacgccggccagctgaccaagcagctctttgtcctgctgaaggattattccaaagccgga
gcggcccgcggagaaaactaccacctggttcagaactgcttcaaggctatcaccattctg
gtgaagaatgtcaaaagcaacaaaatctcagagacacaactgcaggtgctgctgggatac
gccgaggaagacatctacgaccagtctcgccaggccaccgcctttggcctgctgaaggct
attctctccaggaagctcattgttccagagatggaagaggtgttgaaaaaagtggccagg
ctgtcagtcaccggcagcaacgctatgatcagaatccactgccgacagatctatctaaaa
tacctgctggactacccgctggggaggaagctgaaagtgcacctggactttgtggtgtcc
cagctgcactacgagcacgacacaggcagagagtccgtgctggagatgttggcctacatc
tttcagactttccctaagaacctgctgctgaaccacagcggcctgttcttcgccccgctg
gctctggttgtggtgaatgatgactcagcgcgctgtaagaaaatggccgccatggctatc
aaagcgttgctgatccagctggacttaaaccaccagaacaccctgttctccctcgtcaac
acctggctgaaggcagagaagaccagcctacgccgtctcggtgctcagatgtgtggtctc
ttcgtggaggtggaggaggagaagtttgcccgtcgcctggacgatttgctgcctctgctg
gagaaagagataaaccctgacaaatacgaagatatcgaggaggagcaggaggagaaagga
gcagacaggctgctgttcacctttctgactctcatcaccaaactgagcaaacactgcagc
ctgctggagctcagcaagcctcatcatgacacgctctgtcgtatctggggtcacattgaa
gcccacctacggtaccctcattgctgggtgtggctgactgcctcgcagctttttggtcag
ctgtttgcagcccatcaggcggagcagctaatcgctgtttggagaggagaggcaggagat
gctacacctccgccaccggccacagccttcatcgccaacaacctggacaaaaagatgaga
gagttggcattgtctttctgccatcagctacagtccaagttcctagacacggcgtcagga
gagcaggtgatcaagaacctgctgtttgtcggcaaggtgatctacctcctttcccccgag
tccgacatcccctcccctcaggaggaagtaaaagaggaggaggaggaggaggaggaggaa
cagacggagaatggaaatgaagaagatgaagaggagggggaggagaaagaaaaggaagag
gaggaagaagaagaggaagacgacaaagatgaccggcctccttccttaatgtggttgatt
aagaagctgtcgctgatggccaagagagaggcagcatacacacccaaagttccactgaag
agaacgtgtgtgtttaagttcttgggagcgatagctatggatctggggaaggagcgactc
ggcccgtatctgaccaccatcatcactcctctgtacagggagctggacagcacctacgca
gaccaaaatcccacgctgaagaacctggcacaggagctgatagagctgctgaagaaacaa
gtggggctggagagattctctctggccttctctgctgtccagaaggagttttcacagagg
agagcggcacgcaaacgacacagagccatgcaggcggtggctaacccagacatcgcagcc
aagaagaagcttaagaagcacaagaacaaaatcgaagccaagaagagaaagatcgagttc
cttcggcctggttataaagcgaagaagcacaggagccatgcactcaaagacttggccatg
gtccagtga
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integrated database retrieval system
