Larimichthys crocea (large yellow croaker): 104924768
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Entry
104924768 CDS
T04659
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104924768 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lco03009
]
104924768 (wdr43)
Ribosome biogenesis [BR:
lco03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104924768 (wdr43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
Utp12
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_NOL10_N
EIF3I
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Beta-prop_SPT8
ASA1
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Paf1
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
BBS2_GAE
AHSA1
Tricorn_2nd
LysX_preATP_grasp
MinC_C
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
104924768
NCBI-ProteinID:
XP_019123103
LinkDB
All DBs
Position
XXIV:complement(18236222..18248539)
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AA seq
652 aa
AA seq
DB search
MAADGGSSPLQLPCVFSPKSRQYLALCAQDGRLRVWNTDSKTLHQEYVPSAHLSATCVCI
AWGPCRTVKEGPQRKKRKSEAVQVEEKADLLAMGTAAGTVLIYSTAKGALHCTLDGGHSA
GVNCVQWHPEDSLLYSGSDDTNIVEWDLQTGKTRSKWKADRASVTSLCVSPDGKLLLSAG
QIIKMWDLETKEVYRKFTGHSTAVTTLCFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
RKDKNSVVSFTLTDEPQHVDLVTSNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPMSPS
CTVQMSDTKDSPVPIPLLAAALRADTRTVQLAYGNHLQPVMEKVEINTAERHVCLTRDVQ
TSLSLSIETAVSKVKTPIVNAKSKVLVPGLPGHQAPIKGISQGSEKRKKDTDTKEVSIAE
RLGEIDLSSVSAEKGAPKGTASLQTDNFAVLLVQGLESRDANILNKVFQTRKDMVIKKTV
ARLPLPAVLPLVQELTNRLQGHPFTAVLMVRWLKAVLMHHTSYLASLPDLVTQLGVLYHM
IESRVKIFHKLTKLHGKLYLLMTQVATNDSTNTVTDVDHTAKLVYEEESSDEDEASGDEG
LPDNDSDNWEEEAMEDDKEEQADEEDDDPDSKTDSKANGEEDMEHGNESEEE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgatggtggcagctccccgctgcagctaccctgcgtcttttcacccaaatca
cgacagtacttagcgttgtgtgcccaggacggcagacttcgcgtttggaacacggacagt
aaaacacttcaccaagaatacgtgccttcagcccacctgagcgccacctgtgtgtgcata
gcctggggaccatgccggacagtgaaggagggccctcagaggaagaagaggaaatcggag
gcggtgcaggtggaggagaaggcagatttgttggcgatgggcacggcggcgggcaccgtg
ctcatctacagtacagcgaagggagcgctgcactgtaccctggatggaggccacagtgca
ggagtaaattgtgtccagtggcaccctgaagacagtttactgtacagcggctcagatgat
acgaacattgtagagtgggacctgcagacaggaaagacgcggagtaagtggaaggcggac
cgtgcatcagtgaccagtctgtgtgtgagccctgatggcaaactgctgctttcagctggg
cagatcatcaagatgtgggacttggaaaccaaggaggtttacaggaagttcacagggcac
tccacggccgtgacgaccctgtgctttgccaccacgagacctccagacagcaacggcctc
tatttcctgtccggcgctgcacacgatcgactgctcagtgtttggcaagtacgagaggac
agaaaggacaagaattcagtggtgtccttcacgctgacggacgagccacaacacgtcgac
ctcgtcacgtccaacagcaaggaagaggcggtgaggctggcagtggtgtgtaaggacgga
cagctgcatctctttgagcactttttaaatgggccctgtaagaagcccatgtcaccctcg
tgtacagtgcagatgtcggacacaaaggattccccagtgccgatcccactgctggctgct
gccctcagagctgacacacggactgtgcagctggcctacggcaaccacctacagcctgtc
atggagaaagtggagatcaacacagcagagcgacatgtctgtttgacccgggatgttcag
accagcttgtccctttccatagaaaccgctgtttccaaggtgaagaccccaatcgtcaat
gccaagagcaaagtgttggtcccagggcttcctggtcaccaagccccaatcaaggggatc
tcacaggggtcagagaagaggaaaaaagacacagacaccaaagaggtgtcgatagcagag
cgactaggagaaatcgatctgtcttcagtctccgctgagaagggggcacctaaaggaaca
gcgtctttacagacagacaattttgcagtgctgctggtgcagggcctggagagcagagac
gccaacatcctaaataaagtttttcagactcgcaaagacatggtgataaagaagacagtc
gctcggttacccctccctgctgttttacctttggtgcaagagctcacaaaccgactccaa
gggcacccttttacggcagttttaatggtacggtggctgaaggctgtactcatgcaccac
acatcatacctggcatcgcttccagacttggttacccagttgggcgtgctgtatcacatg
attgagagcagagtgaagatattccacaaactaacaaagctgcacgggaagctgtatctg
ctaatgacacaagtggcgacaaatgacagcacgaacacagttacagatgttgaccacacg
gccaagctggtgtatgaggaggaatcatccgatgaagatgaggcctctggtgacgaagga
cttcctgataatgactcagataactgggaagaggaggcgatggaagacgacaaggaggaa
caagcggacgaggaggacgacgatcctgacagcaaaacagattccaaagctaacggggag
gaagacatggagcacggaaacgagagcgaggaggaatga
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