Larimichthys crocea (large yellow croaker): 104924831
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Entry
104924831 CDS
T04659
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104924831 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104924831 (prpf38b)
Spliceosome [BR:
lco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104924831 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
104924831 (prpf38b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
104924831
NCBI-ProteinID:
XP_010736599
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Position
XII:complement(15500008..15506129)
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AA seq
462 aa
AA seq
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MANVGNQLPAQAVSKPAPGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQLMGLITHTDSPYIRALGFMYIRYTQPPADLIEWYDGFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKIIDQQMKARPRKVAQKEPQEEEAASAEAGRQGERR
RSRTPRRTPSPRRSPKRSRSRSHHRERDRHGPSFDRELERERDRQRKERDGRDRDRDRGD
RGDRERRRSRSADRNQDRRERGSRERKNERRDKERDGGDDKSRRKDREHHKDRGAERERS
RDKKNRGETDDRRHKDDRERHREERKAKRSSRSRSRERRHKGGGEEKSRKRERSHSRDRE
RERDGDQRSHKRSGSKERSHHQRESSNDHSKHSERRRSQSTE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcgggaaccagctaccagcacaggccgttagcaagcctgcgccggggaaa
catggaaacgtattgcccctgtggggcaacgaaaagactatgaacctcaacccaatgatt
ctcacaaacgtgctgtcttcgccgtattttaaagttcagctttacgaactgaagacctac
cacgaagtcgtggacgagatctatttcaaggtgactcacgttgagccctgggagaaagga
agcagaaagaccgcgggccagactggaatgtgcggaggggtgcgtggagttgggactggc
ggtattgtgtccactgctttctgtcttctatacaaactgtttactctgaagctgacacgc
aaacaactgatgggtttgatcacccacacggactctccatacatcagagcacttggcttc
atgtacataagatacactcagcctccagcagatttgatagaatggtacgacggcttcctg
gatgatgaggaggaactcgacgtgaaggccggaggcggctgcgtgatgaccgttggagag
atgctgcgctccttcctgaccaaactggagtggttctccactctgttccctcgtatccca
gtgcctgtgcagaagattattgaccagcagatgaaggctaggccgaggaaggtcgctcag
aaggagccgcaggaagaggaggccgcgagtgcagaggcagggaggcaaggggaacgacgt
cgctccaggacacccaggcgaacaccgagcccccggaggtcacccaagcggtcaaggagc
aggagccaccaccgcgagagagaccgccacggccccagctttgacagagagctggagagg
gagcgtgaccgccagagaaaggagagggatggcagggaccgggatagggacagaggggac
cgaggggacagggagagacggcggtcccgcagcgccgacaggaaccaagaccggcgagaa
cgcggcagccgggagcgaaagaacgaacgcagagacaaagaaagagacggcggagatgat
aagagcaggaggaaggacagggagcaccataaagatagaggcgctgagagggagaggtcc
agggataaaaagaacagaggagagactgatgacagaaggcataaagacgacagggagagg
cacagagaagagaggaaggccaaaaggtcgagccggagtcgaagccgggagaggaggcac
aaaggtggaggagaggaaaagagcaggaaaagggagcgcagccacagcagagatagagag
cgtgagagagacggagatcagcgttctcacaaacgtagtggtagcaaagagaggagccat
catcagcgagagtccagtaatgaccatagtaaacatagtgaacgcagaaggagtcagagc
actgagtaa
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