Larimichthys crocea (large yellow croaker): 104924856
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Entry
104924856 CDS
T04659
Name
(RefSeq) aryl hydrocarbon receptor
KO
K09093
aryl hydrocarbon receptor
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104924856
Transcription factors [BR:
lco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104924856
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_HIF1A
bHLH_NPAS4
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
104924856
NCBI-ProteinID:
XP_027146569
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All DBs
Position
XVIII:complement(3426036..3462642)
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AA seq
968 aa
AA seq
DB search
MYAGRKRRKPVQRAVKQPPTEGAKSNPSKRHRDRLNGELERLASLLPFPEEVTASLDKLS
ILRLSVSYLRAKNFFSVTLNSRKGVTDGDSKTAGGADTKIPEGDLLLQALNGFVLVITAS
GTIFYSSHTIQDYLGFHQTDVMHQSVYELVHTEDQQELRRNLHWALNPPPPPAASITQDS
PQEMEPDSSSSLVTYNPEQLPPENSSFLERSFMCRFRCLLDNSSGFLALNIHGRLKFLHG
QNQRQENGGKVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFTPMACDAKGKIVL
GYTEAELRVRGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTKENRWKWVQANAR
LVYKNGKPDYIIATQRPLLDEEGGEHLLKRSMHLPFTYATGEALLYQSNHPIAVYRDGSH
EKNGSKSKKSRADSLVRDGLDPGSLLGALMSQDESVYVCQPALEPKMSFHSFFGDQMGFS
DSESSSLHRSWDEPSNGVLDPGNTQATTSFDPLLSTLDSLSLEGQGVVDSEEGGCTISEL
FGALEGLGLSAEDLELLLLDERMIRVEMDPERVPTLDDLLTNEEILSYIYDSIEGKIDST
ECGGQVPPSTSSATATAVSLPNSNQTPDANVQIQFPQHKPPRAEQAPIVQLSQQMQQHLN
MRSSKVAHDWGQRSDHLANTIAVNGDLLGKNHSPIPNGQWTPQDILANAGIQVEHYNTQQ
TIFNGKASELDAKLHQQQMHQRYLQHQQQPRMQNHLSQQCHAKQKAANLNGLCGISSTEH
SAGNPQWQDYGFSGSLGSNLCLDNSQKPLTNASLDSCMDYSMPDINNVDYTISGSLFGRS
GQQHGSESTVSSFQGMNHKQQQQEPIPVPLAQVISSLSQCPPPNASLDQILGVGKPCQQL
DHYGTMMTSEITHDASPNKMENGCFLNSTYPGGCALPNRNGAVPPTVQMPSPETLSSLPD
PPATGFYL
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaggacgcaagaggagaaaaccagtccagagagcggtgaagcagccgccaact
gaaggggccaaatctaacccgtccaaacggcatcgggatcggctgaacggggagctggag
cggctggccagtctgctgcctttccccgaggaggtcaccgccagtctggacaaactctcc
atcctccggctgagtgtcagctacctgcgagccaagaacttcttctctgtcacactgaac
agtcggaaaggagtgaccgatggcgacagcaaaacagcaggaggggcggacaccaagata
cctgaaggcgatcttttgctgcaggctctcaacggttttgtcctggttatcactgccagt
gggaccattttctactcctctcacaccatccaggattacttaggcttccaccagacggat
gttatgcaccagagtgtgtatgaactggtccatacggaggaccagcaggagctcaggaga
aacttgcactgggctttgaatcctcctcctcctcctgctgcatccatcactcaggactcc
ccccaagagatggaaccggacagcagctcatcgttggtcacctataaccctgagcagctt
cccccagaaaactcgtccttcctggagaggagctttatgtgtcgctttcgctgcctcctg
gacaactcctctggcttcctggctttaaacatccatggcagacttaagtttctgcatgga
cagaaccagcggcaagaaaacggaggaaaggtcccgcctcagctcgccctttttgccatt
gcgactcctctgcagcctccatctatcctggagatcaggaccaagaacatgatcttcaga
accaaacacaagctggacttcacacctatggcctgtgacgcaaaggggaagatcgtgttg
gggtacacagaggctgaacttcgggtacgaggatccggctatcagttcatccatgcagca
gatatgttgtactgtgcagagaaccatgtcagaatgatgaagactggagagagtggtctg
actgtgttcaggctcctcaccaaggagaatcgctggaagtgggtccaggccaatgccagg
ctggtgtacaagaacggcaaaccagactacatcatcgccacccagaggcctcttttggat
gaggaaggaggagaacacttgcttaagcgctccatgcatctaccatttacctatgctaca
ggagaggccctgctctaccagtcaaaccaccccatagcagtctatagagatggaagccat
gagaaaaatggcagtaagtcaaagaaaagccgggctgacagcctggtgagggatggtctg
gaccccggctctcttctaggggcgctcatgagtcaggatgagtcagtgtatgtttgccag
cctgccttggagcccaaaatgtcattccatagtttctttggagatcaaatgggcttctct
gactctgaatcctccagcttgcacaggagctgggacgaaccaagcaatggtgtgctggat
ccaggcaacacacaggcaaccaccagctttgacccactgctgtctactctagactccctc
tccctggaaggccaaggggttgtggattcggaagaggggggttgtacaattagtgagctg
tttggggctctggaagggttggggctgagtgctgaggatctagagctgctgctgctggac
gagcggatgatcagagttgagatggaccctgaacgagtgcccactttggatgacctgctg
acaaatgaggaaatcctttcttatatctacgactccatagagggaaagattgattccaca
gaatgtggaggacaggtgcctcccagtacttcctcagcgacagccacagcagtgtcacta
cctaatagtaatcaaactcctgatgctaatgtgcaaatacagtttcctcagcataagcct
ccccgggcagagcaggctcccattgtccagctatcccagcagatgcaacaacacctcaac
atgcgatccagtaaagtggcccatgactggggccagcggagtgaccatttggctaacaca
atagccgttaatggagacctgctggggaaaaatcattccccaatccccaatggacaatgg
acaccccaagacattcttgccaatgcagggatacaagtggaacactataacacacaacaa
actattttcaatggtaaggcctcagagctggatgccaagcttcatcagcaacaaatgcat
caacgctaccttcagcatcagcagcaacccaggatgcagaaccatctctcacagcagtgc
catgccaaacagaaggcagccaacctcaatggactgtgtggcatctctagcacagagcat
tcagccggaaacccccagtggcaggactatggattcagcggaagtctgggcagcaacctt
tgccttgataacagccaaaaacctctgacaaacgcttcactagattcttgcatggattat
agcatgcctgatattaacaatgtggattatactattagtggaagtttgtttgggaggagt
ggacaacagcatgggtcggagtccacagtttcatcattccagggcatgaaccataaacag
cagcagcaggagccgataccagttcctttggcccaagtcatctccagcctgtcgcagtgc
ccgccccccaacgcttcccttgatcagatcctaggagttggcaagccatgccagcagttg
gaccactatggcactatgatgacctctgagatcacccatgacgccagtcccaataagatg
gagaatggttgcttcctgaacagtacttatcctggaggctgtgccctgcccaatagaaac
ggagcagtgccccctactgtccagatgcccagtcctgagactttgtccagcctccctgac
ccaccagccaccggtttctacctctga
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