Larimichthys crocea (large yellow croaker): 104924884
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Entry
104924884 CDS
T04659
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104924884
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104924884
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104924884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Tc-R-P
DSPc
PTPlike_phytase
Y_phosphatase3
PTP_tm
Motif
Other DBs
NCBI-GeneID:
104924884
NCBI-ProteinID:
XP_019122559
LinkDB
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Position
XIII:complement(5104767..5274180)
Genome browser
AA seq
1456 aa
AA seq
DB search
MYSAALLLMLVVRIYADSMEGPTAGCTFDEDSDPGLCEYRQGQDDDFDWQLIRTYNWPHP
TPDLLRGSFMMVNSSQHFGGQRAQLLLLPLSENDTHCIQFSYFLYSRDGHSPGDLQVYIR
VNGGPKGSAVWNISGSQGRQWHQVELAVSTFWPSEYQVIFEATISEERQGYIALDDIVLL
NYPCYKVPHFSRLGDVEVNAGQNASFQCVATGKVSEIEPFLLERRNGMLLDTPLLSRLSH
KRLMATFQVEAQRGEQDLYRCITLSSRGAAVSNFGELIVRVPPTPIAPPQLLRAGPTYLI
IQLNTNSIVGDGPVIRREIQYRASQSMWTETHGVGSLTYKVWHLEPDTEYRISVLLTRPG
DGGTGAPGPPLISRTKCAEPMRALRGLTASEIQPRQLVLQWEPLGYNLTRCHTYTLSLCY
RYSMPTGGSGGNNATVRECLSVERNTSHFTLRDLPPFRSVHVRLALANPEGKKESREVTF
QTEEDIPGGIAPESLTFTPLDDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPGP
RRTVSKLRNETYHMFSGLHPGTTYLVSVRARTTKGFGQTALTEITTNISAPVFDYEDIPS
PLSESESTITVLLRPALARGAPVSAYQVVVVEEDGSRQVKRRELGTSDCFPTPNSHNEAQ
ARGAPHYYTAELAPSSLPEATPFTVGDNHTYNGYWNSPLDPTKNYLIYFQATSNFRGETR
INCIRIARKAACKDSKRALEVSQHAEDMGLILGACAGGLVVLILLLGAIVIIVKKGRDFY
SYPYYPRKKVAINKAAMSYRQEKSRKLSSLDCSMTEQSTLQQDERMAHSFMDAHGCNARN
EQRSSVNESSSLLGGSPHRHCRRKSSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQE
YESFFDGWDVTKKKDKTKGRHDSLLSHDRHRVKLHSLLADPSSDYVNANYIDIRINREGY
QRSNHFIATQGPKQEMIYDFWRMVWQENCFSIVMITKLVEVGRMKCCKYWPDDTELYGDI
KITLLKTETLAEYTVRTFAMERRGYPAKHEVCQFHFTSWPEHGVPYHATGLLAFLRRVKA
STPPDAGPVVVHCSMGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEE
QYVFIHDAILEACLCGETAIPVNEFALTYKEMLKVDSQSNTSQLREEFQTLNSVTPHLDV
EECSISLMPRNREKNRSMDVLPPDRSLAFLVTTEGESSNYINAALADSFLRPAAFVVTPH
PLPGTTTDFWRLVYDYGCTSVVMLNQLNQSNSAWPCLQYWPEPGLQQFGPMTVELLSRTA
DDDVIIRLFRVQNITRLQEGQLVVRHFQFLRWSPYRDVPDSKKAFLSLLAQVHNWQRECG
EGRTIVHCLSRNGGGRSGTFCACTMILEMIRHHSVVDVFFAAKTLRNSKPNMVETMEQYR
FCYDLAQEYLDCLEIR
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagcagcattgctactgatgctggtcgtcaggatctacgcagacagtatggaa
ggaccaacagctggctgtacctttgatgaggactctgaccctggcctgtgcgagtaccga
caaggccaagatgatgactttgactggcagctcatcaggacctacaattggccacaccca
accccggatcttctacgagggtctttcatgatggtcaattcctcgcagcattttgggggc
caacgggctcagctgctacttctcccgctcagcgagaacgacacccactgcatccagttt
agctacttcttgtacagccgtgacggccacagccccggggacctgcaggtctacatccgg
gtcaacggaggccccaagggcagcgcagtgtggaatatctcaggctcccagggacgccag
tggcaccaggtggagctcgctgtcagcactttctggcccagtgaataccaggtcatcttt
gaagcgacgatttccgaggagcgacagggctacattgccttggacgacattgtgctgctc
aattacccctgttacaaggtgcctcatttctctcggctgggtgacgtggaggtgaatgcc
gggcagaatgcctcgttccagtgtgtcgccacgggaaaagtttctgagattgagcctttc
ctcctggagcggaggaacggcatgttgctggacactcccttgctgtctcggctgagccat
aaaaggctgatggcaactttccaggtggaggcgcaacgtggggagcaggacctgtaccgc
tgcatcaccctgtcctccaggggtgccgcggtctccaactttggagaactcatcgtcaga
gtgcccccaacaccaatcgctcccccacagctcctgcgggcaggccccacgtatctgatc
atccaactcaacaccaactccatagtcggggacggaccagtcattcggcgggaaatccag
tacagggccagccagtccatgtggacggagactcacggtgtgggctcactcacctataaa
gtttggcatctggagccagacactgagtaccgcatcagtgttctgcttacccggccaggg
gacggcggtaccggagcacctggacctcctctgatcagcaggacgaagtgtgcagagccc
atgcgtgccttgcggggtcttacggcttcagagatccagccccggcagctggttcttcag
tgggagccgttgggctacaacctcacccgttgtcacacctacacattgtccctgtgttac
cgctactccatgccaacaggtggcagcggaggaaacaacgccacggtcagagagtgtctg
tccgtggagcgtaacacgtctcacttcaccctgagggacctgccaccctttcgctcggtc
cacgtccggttggcgctggccaaccctgaaggcaagaaggagagcagagaggtcaccttc
cagactgaggaagacattcccggcggcatcgctccggagtcactgaccttcaccccgctc
gatgacatgatcttccttaagtgggaggagcccgtggagcccaacggtctcatcacgcaa
tacgagatcagctaccagagtatcgagtcatcagatcccggcattaatgtgccaggtcct
cgccgcacagtgtccaagctgaggaacgagacataccatatgttctccggtctgcatcct
ggaaccacctacctggtgtcagtccgagcccgaaccaccaaggggtttggccagacggct
ctcactgagatcaccaccaacatctctgccccggtgtttgactatgaagacatcccatct
ccgctgagcgagtcggagagcaccatcactgtgctgctgcgccctgcgctggcaagaggg
gctcctgtcagtgcctaccaggtggtggtggtggaagaggatggttcccgtcaagtaaag
aggagggaactgggcaccagcgactgcttccccacaccgaactcccacaatgaggcgcag
gccagaggggcgccacattactacacagctgagctggctcccagtagtctgcctgaggct
acgcccttcaccgtgggtgacaaccacacctacaacggctactggaacagccctttagac
cccaccaagaactacctcatctactttcaggccaccagcaacttcagaggggagaccagg
ataaactgcatacggattgctcgcaaagctgcctgtaaggactctaagcgggctctggag
gtatcccagcatgccgaagacatgggtctcatccttggggcctgcgccggcggactggtg
gtcctcattctgcttctcggtgccattgtcatcatcgtcaagaagggaagggacttctat
tcttacccttactaccctaggaagaaggtggccataaacaaggcagccatgtcctacagg
caggagaagagtcggaaactgagctctttagactgcagcatgacagagcagagcactctt
cagcaggacgagaggatggcccactccttcatggatgcccacggctgcaacgctcgaaat
gagcagcgtagctccgtcaacgagtccagcagtttactgggaggctcgccccaccgtcac
tgtcggcggaagagctcgccttatcacacgggtcagctccaccctgctgtgagggtggct
gacctcctccagcacatcaaccagatgaagacagcagagggatatggcttcaaacaagaa
tatgagagttttttcgatggctgggacgtcacgaaaaagaaggacaagaccaaaggaagg
cacgacagcttgcttagccatgatcgccatcgagtcaagctccactctctgctcgcagac
cccagctccgattatgtcaatgccaactacatagacattcggataaacagggaaggctac
cagcgatcaaaccacttcatcgccactcaaggccccaagcaggagatgatctatgacttc
tggaggatggtttggcaggagaactgcttcagtattgtcatgatcaccaagctggtggaa
gtgggcaggatgaagtgctgtaagtactggcccgatgacactgagctctacggtgacatt
aaaataacacttctgaagacagaaacactggcagagtacactgtgcgcaccttcgccatg
gagaggagaggttaccctgctaaacacgaggtgtgccagttccacttcacctcctggcct
gagcatggggtgccataccacgccaccggcctgctggctttcctgcgccgtgtcaaggcc
tcgacacctcctgacgccgggcctgtggtggtccactgcagtatgggggcaggcaggacc
ggctgctacattgtgctggatgtcatgctggatatggctgagtgtgaaggagtggtggac
atctacaactgtgttaagaccctctgctccagacgtatcaacatgatccagactgaagag
cagtatgtgtttatccatgatgccatcctggaggcttgtctgtgtggagagactgccatc
cctgttaatgagtttgcgctcacctataaggagatgctgaaggttgactctcagagcaac
acctcacagctcagagaggagtttcagactctgaactctgtgactcctcacctggacgtg
gaggagtgcagcatttctctgatgcccaggaaccgcgagaagaaccgcagcatggacgtc
ctgccgccggaccgctcccttgccttcctcgtcaccaccgagggtgaaagcagcaactac
atcaatgcggcgctcgccgacagcttcctccggcccgccgccttcgtggtgaccccgcac
ccgctgcccggcaccaccacggacttctggaggctcgtgtacgactacggctgcacctcg
gtggtgatgctcaaccagctcaaccagtccaactctgcctggccttgtctgcagtattgg
cctgaaccagggttgcagcagtttggaccaatgacggtggagcttctgtccaggacagcc
gacgatgacgttatcatccgtctcttccgggttcagaacatcactcggctgcaggaaggc
cagctcgtggtgcgtcactttcagttcctgcgctggtccccataccgcgacgtgcccgac
tccaagaaagccttccttagccttttggctcaggttcacaactggcagagggagtgtgga
gagggacgcaccatcgtccactgcctgagtaggaatggtggcggtcgaagcggtactttc
tgtgcctgcaccatgatcctggaaatgattcgtcaccacagcgtggtggacgtgttcttc
gctgccaaaacgctgcgcaactctaagccaaacatggtggagacaatggagcagtaccgg
ttctgctatgacctggcccaagagtacctggactgcttggaaatcagatag
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