Larimichthys crocea (large yellow croaker): 104924899
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Entry
104924899 CDS
T04659
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65 isoform X2
KO
K12031
tripartite motif-containing protein 65
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104924899 (trim65)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104924899 (trim65)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-B_box
Prok-RING_4
Baculo_IE-1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
104924899
NCBI-ProteinID:
XP_010736681
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Position
XVI:complement(5471955..5479291)
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AA seq
547 aa
AA seq
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MASSGKLHVTGPSAHTDAVHECVCRSEWTALSSEMESQNPNLTCIICFERFRVPVTIPCG
HTFCQKCIATYWDTKSKADIGPHCPICKEEFTTRPTLKRNVSMSVLTEATNSTGASCRES
LMRGGEGARAMLLCDRHKKPLVYYCKQDRMSVCCECGISECESHEKVMLEAERENQELQL
QRKSKEVGKLMEETEKDIKDLAENISQAKVTLQQTSTWVNLKFSTLMKILAEKQEATELF
IEEQQEAAISEAEARLAELQERSKMLRESQGQIEAAQQLSDTELIKESMVIQVPRFKDIP
TDVSPNLQDRLNGVTDVLSRVSKLVSEDLEKAVSTAVGQDKDGSPQDKRPVLAVVPSPAA
PCHPGGKEGLSAYRCSLTFDPRTANGHLFLSQENRRAEHLTSGPRSVPPHEARFDHTWQV
LCFQGFTHGQHYWELEVSKPWAYLGVTYEAIPRKEKGKRCMVGMNELSWSLQLDEHQLSA
WHNGRRETLASHSQHSRIGMLLDYEAGTLTYYGDGQTRLHAFHCAFTQELFPACWIGEGV
SITLCST
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcagggaagcttcatgtgacgggacccagcgctcacacagatgctgtgcac
gaatgtgtctgtcggagtgaatggacagctctttcttcagagatggagtctcagaatcca
aatctgacctgcatcatatgctttgagcgtttccgagtccctgtgaccatcccctgcggt
cacaccttctgtcaaaagtgcatcgccacgtattgggacaccaagagcaaggctgacatc
ggacctcactgtcccatctgcaaggaggagttcaccaccaggccaaccctcaagcgtaat
gtgtccatgtcagtcctgaccgaggccacgaacagcaccggcgcctcgtgcagagagtca
ctcatgaggggaggcgaaggggccagagccatgctgctgtgcgatcgccataaaaagcct
ctggtttattactgcaagcaggacaggatgtccgtgtgctgcgagtgcggcatctccgag
tgcgagagccacgagaaggtcatgctggaggcagagagggaaaatcaagagctgcagctg
cagaggaagagcaaggaggtggggaaactcatggaagagacagaaaaggatattaaagac
ctggctgagaacatcagccaagccaaggtgactcttcagcagacttccacgtgggtcaat
ctcaagttctccaccctgatgaaaatcctggcagagaagcaggaggccacagagctcttc
atcgaggagcagcaggaagctgccatcagcgaggcggaggcacggctagccgaactccaa
gagcgctccaagatgctccgagagagccagggacagatcgaagccgcgcagcagctctct
gacacagagctcatcaaggaatcaatggtcatacaagtcccacgtttcaaagacattccc
acagatgtatctccaaaccttcaagatcgactaaacggcgtcacagatgtcctgtctcga
gtctccaagctggtgtcggaggacctggagaaagccgtgagcacggctgtgggtcaggac
aaagacggttctcctcaggataagaggccggtccttgctgtggttcccagtccagctgct
ccgtgccaccctggtgggaaggagggcctcagtgcttaccgatgctctctgacctttgac
cctcgcactgccaacgggcacctcttcctgtcccaggagaaccggagggcggagcacctg
acctctgggccgcgctccgtcccaccccacgaagcccgctttgatcacacctggcaggtg
ctctgctttcagggcttcacccatggacaacactactgggagctggaggtgtcgaagccc
tgggcctacctcggggtaacctacgaggccatccccaggaaggagaagggcaagcggtgc
atggtgggtatgaatgaactgtcctggagcctgcagctggacgagcatcagctcagcgcc
tggcacaatggccggcgggaaaccctagcgagccactcccagcacagccgcatcggcatg
ctgctggactacgaagcggggacgctcacctactacggggacgggcagaccaggctccac
gccttccactgtgccttcacccaggagctgttccccgcctgctggataggagagggggtc
agcatcaccctctgctccacatga
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