Larimichthys crocea (large yellow croaker): 104924913
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Entry
104924913 CDS
T04659
Name
(RefSeq) protein Tob1
KO
K14443
protein Tob/BTG
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104924913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104924913
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104924913
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104924913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
T2SSM
SinI
Motif
Other DBs
NCBI-GeneID:
104924913
NCBI-ProteinID:
XP_010736703
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Position
XVI:complement(5234537..5237356)
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AA seq
338 aa
AA seq
DB search
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKKKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEQAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
GSELDKEIKNSFNPEAQVFMPISDPVGASSESSSPSPPFGQSAAVSPSFMPRSTQPLTFT
TATFAATKFGSTKMKSSGRGNNASGGSSSKVARTSPTNNLGLNVNTLLKQKAISTSMHSL
YGLGLGQQQQQQQQQQKASALSPNAKEFVFPSLQGQASPGTVFPGEGSLGLGPLQYNNAF
DMFAAYGSLNDKSLMDGLNFSLSNMQYSNQQFQPVMAN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaaattcaagtagcactcaactttattatttcctatttatacaacaaactc
cctcgacgacgcgtgaatatcttcggcgaagagctcgagaggcagctgaagaaaaaatat
gaaggccactggtatccggataagccatacaaaggttcagggttcaggtgcatccatgta
ggggagaaagtggaccctgtggtggagcaggcagccaaagagagcgggctggacatcgaa
gacgtccggaataatctccctcaggaccttagtgtgtggatcgacccgtttgaggtttcc
taccagattggggagaagggaccggtcaaggtgctatatgtggatgataacaatgagaac
gggtcagagctggacaaggagatcaagaacagctttaatcctgaggcccaggtcttcatg
ccaatcagcgaccccgtcggtgcttcctcagagtccagctccccctcccctccttttggt
cagtccgctgctgtgagcccctccttcatgccacgctccacccagcccttaaccttcacc
actgccaccttcgccgccaccaaattcggctccaccaagatgaagagcagcggccgcggc
aacaacgctagcggcggcagtagcagcaaggtggcccgcacctcccctaccaataacctg
ggtctgaatgtcaacaccctgctgaagcagaaagccatctccacctccatgcactcactg
tacgggctgggcctgggtcagcagcagcagcagcagcagcagcaacagaaggcctctgct
ctttcccccaacgccaaggagtttgtgttccccagcctccagggccaggccagccctgga
actgtgttccctggggagggctcccttggactcggccctctgcagtacaacaatgccttt
gacatgtttgcagcctacggaagcctcaacgacaagtcccttatggatggcctcaacttc
agtctgagcaacatgcagtattctaaccagcaattccagccagtcatggctaactaa
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