Larimichthys crocea (large yellow croaker): 104924948
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Entry
104924948 CDS
T04659
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104924948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104924948
Membrane trafficking [BR:
lco04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104924948
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_9
SH3_2
PH
Motif
Other DBs
NCBI-GeneID:
104924948
NCBI-ProteinID:
XP_010736743
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All DBs
Position
XXIII:complement(10547383..10562345)
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AA seq
1261 aa
AA seq
DB search
MSRAEQKDRVLSTSEDPLKCLHNSKADPLLRSRPLSDIYPFHGHADRGAVPYLLSGCGAQ
IQPMTAGPNESRLNGINSSAWSAPVIGQPEGKPYSSRIMKLFSNSKKGPIPAHSPTTDCS
TSNQSSDSNGAQPWPGLSGLGVVDSFKKLRSSVLQGIQSRGAVPSDGEHVPSSNQEMANG
TGVDDARNHFKLAEGHSCSNGNLTDQKLVMSQYGSDIEDYDDEENDEGDGLRRNTRFSRS
IRRAYGAGRISLLDTVNGRVAGRSASEAARGQKLDQTSSSNTQPDNVNENTNVKALSRMS
KSAENLHIFKAPFRLKAPSPGPSSPLEDPQRTSMSNGTPSIQRTASASSVDLRGRKKSPV
KTKGPMLKLVGSMTDLTVRRKRSPSPNPTSPSLMSPLSRLHDDYSRRVPCLTTSERQRRP
SPIRARVLSVGHTPLVLPQPAYDVGPQQHQVLISPVVVEPPERTEATLPGISAHYESAEC
DSSPLNQKEPSQQQEQTEMIPNEVTSDQQRQEAPLQTEDVSPTTSSTPAVSPTCLPEPPT
STSSPTDTSPTSSTETASVKSRRRSGRPRPRPISDYGQLISRKHSIPEEVAELRAEERTA
NALLHKDCSGDDSFENGESPESCSMNGDIQGRRQRPISVIGVVDLFPPDAEEKDDSLPSP
LSRPPIPSHQVPPYRAVSARFRPSTLSQSTPIGLDRVGRRKLHRVLSDGMSECSATLDDS
VSEEEEGSFDELTDVTPHLQPGVELSVLNEWISSGHAVNAEALWDHVTMEEQELAFKAGD
VIRVLDASHTDWWWGRGADREAWFPSSFVRVRVNQEDSSAESVESVADQENPSPRDTHSA
QHKEQMRTNVVQEIMNTERIYIKHLKDICEGYIRQCRKHPDMFTELQLKTIFSNIEDLYK
FQRQFLRDLEKKYNKDQPHLSEIGSCFLMQGEGFSIYSDYCNTHPAACAELQRLMKSGKY
KHFFEACRLLQQMINISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYSGVSKAYEAM
KNVASLINERKRRLESVDTIAHWQVAILHWEGSDVLERSSELIHSGEMTRIVRQGKMQQR
SFFLFDHQLVFCKKDVLRRDLLHYRDRLDMDQTEVVDVPDGRDLDLGLTLRNALRLRNAF
TLEFMCVLCCRKPQDKQRWLEAFAKERYRVKEDQEMGMEISAEQRKQAIVNARRAKQGKS
KSIGYSGSVPPHHQNLHPLHQRHITIPTSVPQQQVFSLAEPPKRKPYHLLYNITRSAFFR
K
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcagaacaaaaagacagggtcttgtccacaagcgaagaccccctgaagtgc
ctccacaactctaaagctgacccgctgcttcgaagccgacccctcagtgatatatatcca
ttccacggtcatgctgacagaggtgcagtcccatatttgctgtctgggtgtggcgcccaa
atacagccgatgactgcaggtcctaatgaaagcagactgaatggtattaactcctccgcc
tggtccgcccctgttataggtcaacccgagggaaaaccctactcgtcaagaattatgaag
cttttttctaactcaaagaagggtcctatccctgctcacagtccaaccactgactgttcc
acctcaaatcagagcagcgacagcaacggcgcccagccctggccaggactttcaggactg
ggtgttgtggactctttcaaaaaactccgctcctctgtgctccagggtatacagagtaga
ggggcagtacccagtgatggagagcacgtcccttcatcgaatcaggaaatggctaatggc
actggtgtagatgatgcaagaaatcatttcaagttggcagagggacacagttgttctaat
ggaaatcttactgaccaaaagttggtgatgagccaatatggatcagatattgaggactac
gatgatgaggaaaatgatgaaggagatggtctcagacgcaacacacgattctcaaggagt
atcaggagagcgtacggagcaggaaggatttctttactcgacacagtgaatgggagagta
gcaggaagaagcgcaagtgaagctgcacgcggtcagaaactagatcagacatccagttcg
aacacccaaccagacaacgtgaatgagaacacaaatgtgaaggcgctgagcagaatgagc
aaaagtgcagaaaatcttcatatatttaaggcacctttcagactcaaagccccatctcca
ggaccttcctcgcctctggaagacccacagaggactagcatgtcaaacgggacgccgagc
atccagaggacagccagcgcctcctctgtggacctccggggccgcaagaagagccctgtg
aagaccaaggggccgatgctgaagctggtaggcagcatgactgatctgactgtccgacgc
aagcgaagtccctcccccaatcccacatctccatctctcatgtcacccctgagccgtctc
cacgacgactactcccgccgcgtgccttgcctaacgaccagcgaacgacagcgccggccc
tcgcccatcagagcccgggtcttgtctgtcggacacacccctcttgttcttccacagcct
gcgtacgatgtaggcccacagcagcaccaggttcttatcagcccggttgttgtggagccc
ccagagagaacagaggcgactttacctggtatctctgctcattatgaatcggcagaatgc
gattcatctccactcaaccaaaaagagccttcacaacaacaagaacagactgagatgata
ccaaacgaggtgacatcagaccaacaaaggcaagaggcacctctccaaacagaagacgtc
tctccaacaaccagtagcacccctgctgtctctccaacatgcctcccagagccacccaca
tcgacctcatctcccacagatacatccccaacctcttccacagaaacagcctccgtcaag
tccagacgaaggagtgggcgcccgagacctcggcccatctctgactatggccagctcatt
tccagaaagcactccattcctgaggaagtggcagaactgcgagctgaagaaaggaccgca
aacgcattgttgcataaagactgtagtggtgatgattcatttgagaatggggaaagtcct
gagagctgcagcatgaacggagacattcagggccggaggcagcgaccaatctcagtgata
ggagttgtggatctgttccctcctgatgccgaggagaaggacgacagccttccatctcct
ctgtcgcggccgcccatcccctcccaccaggtgcccccctaccgagcagtgtcagccagg
tttcgcccctccaccctctcccagagcacccccatcggactggaccgcgttggacggcgt
aagctccacagagtgctcagtgatggtatgtctgagtgctcagcaacacttgatgacagc
gtgagtgaggaggaggagggcagctttgatgagctcactgatgtcacgccccacctccag
ccaggggtggagctctccgtgctcaacgagtggataagctctggccatgcggtgaatgct
gaggctctctgggaccatgtgaccatggaggagcaggagctggccttcaaagctggggat
gttatccgcgttctggatgcctcgcatacggactggtggtggggcaggggagctgacagg
gaggcctggttcccctccagctttgtgagggtccgagtgaaccaggaggactcgagtgca
gaaagtgtggagagtgtagcagaccaggaaaatccatctcccagggacacgcacagcgct
cagcacaaagagcagatgagaaccaacgttgttcaggaaatcatgaatactgaacgtatt
tacatcaaacacctaaaggacatctgtgagggttacatccgtcagtgccgcaaacacccg
gacatgttcactgagctgcagttgaagaccatcttcagtaacatagaggacctttacaag
tttcagaggcagtttctcagagacctggagaagaagtacaacaaagaccaaccacatctc
agtgaaataggctcttgttttctcatgcagggagaaggattctctatctactcagactac
tgtaacactcatccagcagcctgtgctgagcttcagcgcctcatgaagtcaggcaaatat
aagcatttctttgaggcctgccggctcctccagcagatgattaacatttccattgcgggt
ttcttgctcacgcccgtccagaagatctgtaaataccctttacagctgggagagctgctc
aagtacacccccaaagaccacagtgactacagcggagtgagcaaagcgtacgaggctatg
aagaatgtggccagtctgataaatgagaggaagagacgactcgagagtgttgacaccatc
gctcactggcaggtggccattctgcactgggagggctctgatgtgctggagcgcagctca
gagctcatccactccggcgagatgactcgaatcgtccgacaaggcaaaatgcaacagcgc
agcttcttcctgtttgaccaccagttggtcttctgtaaaaaagacgtcctgcgaagagac
ctgctccactaccgggaccggctggatatggaccagaccgaggtggtggatgtgcccgac
gggcgggacctggacctgggtctgaccctgaggaatgctctgcgcctgcgaaacgccttc
actctggagtttatgtgcgtgctgtgctgcaggaagccccaggacaagcagaggtggtta
gaggcctttgccaaggagagatacagagtcaaggaagaccaagaaatggggatggagatc
agtgcagagcaaagaaaacaggccattgttaatgccagaagagccaaacaggggaagagc
aaatccatcggttactctggttctgtcccaccacaccaccaaaaccttcacccgcttcac
cagcgtcacatcaccattccaaccagcgtgcctcagcagcaggtcttttcactggccgag
cccccaaaacgaaagccttatcacctgttgtacaacatcacccgcagcgcttttttcagg
aaatga
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