Larimichthys crocea (large yellow croaker): 104924989
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Entry
104924989 CDS
T04659
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104924989
Membrane trafficking [BR:
lco04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
104924989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
SGL
EGF
EGF_2
EGF_3
Motif
Other DBs
NCBI-GeneID:
104924989
NCBI-ProteinID:
XP_019119951
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Position
III:51692069..51702180
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AA seq
1368 aa
AA seq
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MGGRLFLCAVLLQLSGFSQVVSAGSSPLKCAVGNKPCSDGSECVLYNYVCDGEPDCKDGS
DEEDCASECSEDQFQCAHGKKCIDKDQVCDGVPHCQDRSDELQCMKQTEGCVHHCDNKSR
CLPPKLLCDGERDCIDGTDEANCEDQEEDGHEKEEGTSTTSLPFASVVSPTPIKCPFGSK
PCKDDMECVLYKHECDGEADCRDGSDEEECTLVCAKDQFQCAHGKKCIEQGQVCDGVSQC
QDRSDEMGCAKQMEGCAHQCDNKSRCIPNSFLCDGERDCGDGSDEKNCVDEGCSATDFKC
TSGQCVLATMRCDGHPDCWDRSDEESCTNAPACTTKHRCPKSKECLVQEWICDGDQDCKD
GTDEKDCPLAPLNCAEFQWSCKSKTECIPTAWRCDGMKDCDDGSDETECGVVTCLPHQFQ
CGSQECLDPSLVCNGITNCADGSDEGGSCRINCAEADSRRCSQNCYNTPQGTRCRCAAGF
KLMEDGLTCADIDECESPGVCSQLCYNTPGSYQCDCHPGYIIEADGRQCKITGEPFLLAS
IQTDLFLLGLRSGSLDVLSSSAKKAILSLDYDWREQRVFWVSLDTESIRWSSLDQKTTGT
LIKGVRADSVAVDWLGRNLYWIDGVNSKIVAIRLATTTVNSLNHSVILDEDLDQPRSLAL
LPQKGLMFWTEIGNVVKIERAGMDGSERTAVVNSSLGWPGGVAVDTISDRVYWTDERLRA
IGSATLDGDDIRILQMKETTNPFSLAVFNDILYWSDAKKRVVLAAHKISGKNRQVLLKRP
RQPFGVKIIHPLLQMGIEGLCEKTHCSHMCVLAPGPKAVCKCPSGLLLAENGLTCSSLVN
SAFLLMLSPSTVTQIYLQSRHTAAELNGWPEHLALQVPSVNEAAIMDYSLHDHTLFLTDD
GTTSLSSFKLKDSDLSPQGRLLKLLGDTITAMALDWVTFNVYWSSNKQPRLQVTSITAAH
TAVLIKEGISRVKSIALHPPRGRVCFTNLGLQGTGTVATVECANMDGAGRSVVWKDAVQP
TSLAFSTNGDTIYWVDTGLGTVSSVQLDGSGYRELKAGDGLAAVALSDDALLWMTVSGNG
LYNKTRIWYRDEQQQNKLWFEVGTEVVSLKAFSKSSQTGSNQCTENNGNCQHLCLATPGG
RTCKCAHDHILVNATHCSPEQHCPDGSRPCLDQLSCQPVEKFCNGHTDCYDHSDENCVTL
KQWSGAKVHAPTRPLSSSTPPSSFPALSEVASPNNTLNVGGQLMNLDTQECSQKLCSGNG
RCVVINGDTACVCSLGYSGDSCQDHLLKTLQNPFVYGAAGLCAGMVVIAVMAVVVKRRKS
ANTRRASPAAVKETSMTDLENKAETTQSTQISPAPNTDDPEEVVSSVD
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacgtttgtttctttgtgcagtcttattgcagttgtcagggttctcgcaagtt
gtttcagctggaagcagtcctttgaagtgtgctgtgggcaataaaccatgcagtgatggc
tcagagtgtgtcctctacaactatgtgtgtgatggagagcctgactgcaaggatggttca
gatgaagaggactgtgcatcagaatgcagtgaagatcagttccagtgtgcccatggcaaa
aagtgtatagacaaggaccaggtgtgtgatggtgtacctcactgtcaggaccgctctgat
gaactgcagtgtatgaagcaaactgagggctgtgttcaccactgtgacaacaagagtcgc
tgcttgcctccaaagctcctctgtgatggagaaagggactgtatagatggcacagacgag
gccaactgtgaggaccaagaggaagatgggcatgaaaaggaagaaggaaccagtacaacg
tctctgccttttgcctctgttgtctcaccgactcccatcaagtgtccttttggctctaaa
ccctgcaaggatgacatggagtgtgtcctctacaaacacgagtgtgacggagaagcagac
tgcagagatggctcagatgaggaagaatgcacactagtctgtgcaaaggaccagttccag
tgtgcccatggaaagaagtgcatagagcagggccaggtgtgtgacggtgtgtctcagtgt
caggaccgctctgacgaaatgggatgtgccaagcagatggagggctgcgctcaccaatgt
gataacaaaagccgctgcattccaaacagcttcctctgtgacggggagagagactgcggg
gacggcagcgatgagaaaaactgtgtagatgaaggctgcagtgccacagattttaagtgt
accagtggccagtgtgtgttggccacaatgcgttgcgatggtcacccagactgctgggac
cgctcggatgaggagagctgcaccaacgcaccagcctgtaccaccaaacaccgctgcccc
aagagcaaggagtgtctggtgcaggagtggatctgtgacggggatcaggactgcaaagat
ggcacagatgagaaggattgtcctctggctccactgaactgcgctgagttccagtggtca
tgtaaatccaagaccgagtgtatccctacagcctggaggtgtgatggcatgaaggactgt
gatgatggcagtgacgagactgaatgtggggtggtaacatgcctccctcaccagttccag
tgtggcagccaggagtgcctggatccatccctggtgtgcaacggcattaccaactgtgca
gacggctcagacgagggaggcagttgtcggataaactgtgcagaggcagatagccgccgc
tgttcccagaactgctacaacacgccacagggaacccgatgtcgctgtgcagcaggattt
aagctcatggaagacggactgacctgtgctgatattgatgagtgtgagagtccaggggtg
tgcagtcagctgtgctacaacactccaggctcttaccaatgtgactgtcaccccggctac
ataatcgaggcagacggacgccagtgcaagatcaccggtgaacccttcctgttggcgtca
atccaaacagacctcttcttgttgggcctacgcagtggcagcctggatgtgttgtcctcc
tctgccaagaaggccatcctctccctggactatgactggagagagcagagggtcttctgg
gtcagtctggacactgagagcattaggtggtcctcattggaccagaagaccacaggaact
ctgattaaaggtgtcagagctgattctgtagctgtggactggcttgggaggaacctgtac
tggatcgatggagtaaacagcaagattgttgctatcagactggccacaaccactgtgaat
tcactgaaccacagtgtcatcttggatgaagacctggatcagcctcgctcgctagcactg
ttgccacagaaagggctgatgttctggacagagattggtaatgtggtgaagatagagcgt
gctggaatggacgggtcagagaggacagcagtggttaactccagtctgggctggccgggt
ggtgtggctgtcgacacaatctctgacagagtctactggacagatgaaaggctgagggcg
attggatctgcaacactagatggagatgacattcggattctgcagatgaaagagacgacc
aatccattctccctggcagtgttcaatgacatcctgtactggtctgatgccaaaaaacgt
gttgtgctggctgctcataaaatctctggcaaaaaccgccaagttctcctgaaaagaccg
agacagccatttggcgtcaagatcatccacccgttgctccagatgggtattgagggcctc
tgtgagaagacgcactgttcccatatgtgtgtgttggccccaggacctaaggctgtgtgc
aagtgtccctctgggcttttactggctgaaaatggcctgacttgctccagcctggtcaac
tctgcattcctgctgatgctgtctccctccactgtcacccagatctatttgcagtccaga
cacacagcagccgagttgaatggctggcctgaacacttggccctgcaggtgcccagtgtc
aatgaagcagccatcatggactacagcctacatgaccacaccctgttcttgacggacgat
ggcacaacttcactcagctccttcaaactgaaggactctgacttgtctcctcagggccgg
cttctaaaactcctgggagacacaatcaccgccatggccctggactgggtaacatttaac
gtctactggagcagcaacaaacaaccccgtctgcaggtcacctccattaccgctgcacat
accgctgttctcataaaggaaggtataagtagagtgaagtccatcgccctccaccctccc
aggggaagagtttgttttactaacctgggcctgcagggtacaggtactgtggctactgta
gagtgtgccaacatggatggtgctgggcggagcgtggtgtggaaggatgctgtccagccc
acatctctggccttctccactaatggggatacaatttactgggttgacactggtttaggg
accgtcagctctgtccagcttgacggctcaggatacagagagttgaaagctggtgatggc
ttggctgctgtggctctgagcgatgacgcactactctggatgactgtcagtggtaatggc
ctatataataagaccaggatctggtatagagatgagcagcagcagaacaagttgtggttt
gaggtcggcacagaggtggtcagcctaaaggcgttcagcaagtccagtcagactggttcc
aaccagtgcacagaaaacaatggcaactgccagcacttgtgcctcgccaccccaggaggt
cgaacatgcaagtgcgcacatgaccacatccttgtaaatgccacccactgcagcccagag
cagcactgcccagatggcagcaggccctgtctggatcaactctcatgccaacctgttgag
aagttctgtaacgggcacactgactgttatgaccactcagatgagaactgcgtcacactt
aagcagtggtcaggagccaaggtccatgctcccaccagacccctcagctcctctactcca
ccctcttctttccctgctctctctgaggtcgccagcccaaacaacaccctgaatgtaggc
ggtcagctgatgaacttggacacccaggagtgcagccagaaactctgcagtggcaacgga
cgctgtgtggtgatcaatggagacactgcgtgtgtgtgttcactgggctacagtggcgat
tcctgtcaagaccatctcttgaagaccttgcagaatccttttgtctatggtgccgcgggc
ctctgtgcaggaatggtggtcattgctgtgatggcagtggtggttaagaggaggaagagt
gccaacacaaggagagctagccccgcagcagttaaggaaaccagtatgactgacctggag
aacaaagcagagaccacgcaaagtacacaaatttccccagccccaaacacagatgatcca
gaggaagtggtatcttctgtggattga
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