Larimichthys crocea (large yellow croaker): 104925034
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Entry
104925034 CDS
T04659
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco02010
ABC transporters
lco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104925034 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104925034 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104925034 (abca2)
Transporters [BR:
lco02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104925034 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
Motif
Other DBs
NCBI-GeneID:
104925034
NCBI-ProteinID:
XP_019128644
LinkDB
All DBs
Position
III:626959..712203
Genome browser
AA seq
2567 aa
AA seq
DB search
MWNPLWPSAALACLTSFFLLDSNAESFLLLFHVWSCDFLFMTNPPSVGPHPPLFPHLYPP
PPWIASPPSILLCHIFFLCLSFFLSPPLFPPSCPAFYSAAPLTSAGIIPIMQSLCPDGQR
DEFGFLQYKNSTVTQLLERISEVVEQNRLFTSDWPGLGQELETLQQHLESLSSTPLPPDC
NFNDSQGFTLASVLKNQLVFQQFLVKNLSLSNSTTSLLLNTPVSLREVHSLIFGTSLRDG
GGAQSWIQGTKDSSKKPAHKVLHLEEKLLGGVYSLDGGLIHKALSDPSKAAHRQALLKLM
SQALGLTEVSGNQRNDQQALKEVEGVLLTGAMLEVLTCGEGGAMEFSKILLVPEKQRPVL
QTYRSAVCSGGERQRSERFRQMSLELREQINTQSVIEKLHLEQPNSFVPLSQSHLGALLK
DLADVERLLKDVDLLSGLARLLPKGACIGRTPASPTNMSWPLNATTWGPNMTDIPGEEGE
EGADGGGGAGGGKGKEESENPHSQFSAFVQLWAGLQPILCGNNRIIEPEALKQGNMSSLG
FTSKEQRNLGLLVHLMTTNPKILYSPIGSEVDKVIQKANETFAFVGNVTHYTRVWLNISA
QLRTFLEEGRLHNHLVWLQQLSSELQQHPELLNGTDSELMQGLMEGNYSLPNTSTLLEQL
DTIDNAACGWTRFMSKVSVDVFKGFPDEDSIVNYTLNQAYQDNVSVFASVIFQTKSDGSL
PPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLYGFVWIQDMIERAIINTFVGH
DVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEHRLKEV
MKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRVLLHSNPFIIWLFLTIYAVATI
MFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMSTTA
FGLGSKYFALYEVAGVGIQWRTISQSPVEGDDFNLGLSMMMLIIDAGVYGVLTWYIEAVH
PGMYGLPRPWYFPLQKSYWSGSGRVETWDWPWCGGGAARLSVMEEDQACAMDQRRTEEMR
GIEEEPSHLPLVVCIDKLTKVYKTGSKLALNKLSLNLHENQVVSFLGHNGAGKTTTMSIL
TGLFPPTSGSATIYGHDIRTEMERIRQNLGMCPQHNVLFDKLSVEEHLWFYSRLKGMAEE
DIRKEMDKMIVDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYA
RRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTYGDGYK
LTLVKKQCEGRGQGSQLQPPSSLSPSSSLSPCSESRVTQFIRQFVASCLLVSDSNTELSY
VLPSEAVKKGCFERLFQALEQSLDSLALTSFGVMDTTLEEVFLKVSEEDQSLENSDADMK
GSPGGSSVGKSSVGSAVQGGPQGETGPSVKCEKPEVELSNLVMCSRLSESQSSLKSSSSI
GSVRGDEGGLYADFYGDYCPLFDNGQESDSASLRGDAENPSSPEPEVLEGQGSFKLEGWW
LKLSQFHGLIVKRFHCAKRNTKGLFSQILLPAFFVCVAMTVALSVPEIGDLPPLILSPSQ
YHNYTQPRGNFIPYANENRPQYRSKLSPDASPQKIINTLRLPSGVGATCVLKTPFNSTLD
QLAQTLNPSANNSKTLAARYFDSMCLDSFTQGVPLSNFVPPPPSPAPSDDPDPRFEDGLW
NITVAPPTTVHEPVTSPPTLPLSVHEPVRCTCSMQGTGFSCPSGVGGRPPIMKVVTGDIL
VDITGRNVSEYLLFTSDRLRLHRYGGLTVGNIQKSIPASFGRNIPPMVRKIAVRRSAQVL
YNNKGYHSMPTYLNVLNNAILRANLPSSRGNPAAYGITLTNHPMNRTSASLSLDYLLQGT
DVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCDPVIYWLANYIWDMLNYLVP
ATCCVIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSTAYVFLIVI
NLFIGITATVATFLLQLFEHDKDLKKVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYY
AKIGQFDKMKSPFEWDIVTRGLVAMTIEGFVGFLITILCQYNFLRKPPRVPVSCQPIDDD
DVDVACERRRVLRGDADNDMLKIENLTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVN
GAGKTTTFKMLTGDECTTGGEAFINGNSILKDLLRVQQSIGYCPQFDALFDDLTAREHLE
LYTRLRGIPWKDQERVVQWALEKLELSKYADKPAGTYSGGNKRKLSTSIALIGYPSLIFL
DEPTTGMDPKARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSI
QHLKNRFGDGYMITVRTKSSSNVKEVVRFFNRNFPEAVLKERHHTKVQYQLKSERISLAQ
VFSKMEQVVEVLGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQEASPPGGGQSPLQCILNL
LKSQPANTELNTLTSEAPEELESDDDEGLISFEEERVQLSFNTDTLC
NT seq
7704 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatcctctctggccatcagctgctttggcttgtctgacgtcgttcttccttctg
gactctaacgcagaatctttccttctgctttttcatgtttggtcctgtgattttcttttc
atgacaaaccctccatctgttggtcctcatcctcctctttttccacatctgtatcctccc
cctccttggattgcctcgccaccctccatcctactttgccacatcttcttcctttgtttg
tctttttttctgtctccccctctctttcctccctcatgtccagccttctacagtgcagcc
ccactcacctcggctggcatcattcccatcatgcagtcgctgtgcccagatggacagagg
gatgaatttggtttcctgcagtacaagaactccactgtgacccagctgctggagcggatc
agtgaagtggttgaacagaatcgactcttcacctcagactggcctggtttgggtcaagag
ctggagaccctgcagcagcacctggagagtctcagttccacccctttaccaccagactgc
aacttcaacgacagccaaggctttactcttgccagtgtgttgaagaaccagttggttttc
cagcagttcctggtcaagaacctttccctgtccaactccacaaccagcctgctgctcaac
actccagtcagcctcagagaggtgcacagtcttatctttggtacatccctcagagatggt
ggaggggcccaaagttggattcaggggacaaaagacagcagtaaaaaacctgctcacaaa
gttcttcatctggaggagaagcttctaggaggtgtttacagtctggatggaggtctgata
cacaaagccttaagcgacccatcgaaagcagcccacaggcaggctctgctcaaactgatg
tcccaggccttaggcctcactgaagtctcaggaaaccagagaaatgaccaacaggccctg
aaggaggtggagggggtcctcctgactggagccatgctggaggtcctcacttgtggggag
ggtggggccatggagtttagtaagatcctgttggtgcctgagaaacagcgaccggtgctg
cagacctatcgcagtgcagtttgcagcggaggggagcgtcaaaggtcagagcgcttcagg
cagatgagccttgagctgagagagcagatcaacacacagagtgtcattgagaagcttcac
ctggagcaacccaactcttttgtgcctctctctcagtctcacctcggggccttattgaag
gacctggccgatgtagagaggctcctcaaggatgtagacctgctctctggcctggcccgc
ctgctgcccaaaggtgcctgtattggtcgaactccggcatcacccacaaatatgagctgg
ccccttaacgccaccacgtggggccccaacatgactgacatccccggagaggaaggggag
gaaggagcagatggagggggaggagcaggaggagggaaagggaaggaagaatcagagaac
cctcattctcagttttcagcatttgtgcaactgtgggccggactgcagccaattctgtgt
ggaaacaacaggatcatcgagccagaggctttgaagcagggcaatatgagttctctgggg
ttcaccagcaaagaacagaggaatctgggcctacttgttcacctgatgactacaaatccc
aagatcctgtactcccccattggctctgaggtggataaagtaattcagaaggcaaatgag
acatttgcatttgtcgggaacgtgacacactatacccgtgtgtggctcaacatctccgcc
cagctcaggacttttctggaggagggtcggttgcacaaccacctggtgtggttacagcag
ctgtcctcggagcttcagcagcaccctgagttgttgaatggcacagacagtgagctgatg
cagggtctgatggagggaaactacagtcttcctaacacctccaccctgctggagcagctg
gacaccattgataacgctgcctgtggctggacgcgcttcatgtctaaggtcagtgtggat
gtcttcaagggctttcctgacgaggacagcattgttaactacaccctgaaccaggcctac
caggacaacgtgtctgtgtttgccagtgtgattttccagactaagtcagatggctccctg
ccacctcatgttctgtacaaaattagacaaaactccagctttacggagaagaccaatgag
atcagacgggcatactggcgtcctgggcccaacaccgggggcaaattctactttctctat
ggttttgtttggatccaagatatgatagagagagccatcatcaacacgtttgtgggccat
gatgtggtggaacctggtaactacgttcagatgttcccctacccgtgttacaccagagat
gacttcctgtttgtgatcgagcacatgatgcctctgtgcatggtgatttcctgggtttac
tcagtagccatgatgattcagcacattgtggctgagaaggagcaccggctcaaagaggtg
atgaagatgatgggtctaaacaacgctgtgcactgggtagcttggttcatcaccggcttt
gtccagctttccatctctgtcactgctctgacagccatcttgaagtacggccgggtatta
ctccacagcaaccccttcatcatctggctcttcctcactatctatgccgtggccaccatc
atgttctgttttttggtgtcagttatctactcgaaggccaagctggcttcagcctgtgga
ggaatcatctacttcctcagctacgtgccctacatgtatgtggccattagggaggaggtg
gcccatgataagatcactgcctttgagaaatgcatcgcttcgctgatgtccaccacagcc
tttggccttggctccaagtattttgcgttgtatgaggtagcaggtgttggcatccagtgg
cggaccatcagccagtcaccagtagaaggtgatgactttaacctgggcctgtccatgatg
atgctcatcatcgacgctggtgtgtatggtgtgctcacctggtacatagaagctgtgcat
ccaggaatgtatgggctaccccggccatggtacttccctctgcagaagtcctattggtca
ggcagtgggcgtgtcgagacctgggattggccatggtgtggaggtggggctgccaggctc
agtgtgatggaggaagatcaggcttgtgcgatggatcagcggagaactgaggagatgcgg
ggcatagaggaggagccgagccacctaccattggtggtgtgtatagacaagctgaccaag
gtgtacaagactggcagcaaactggccctcaacaaactgagcctcaacctccatgaaaat
caggtggtctccttcctgggacacaacggtgctggcaagaccacaaccatgtccatcctg
acaggcttgttcccgcccacctctggttctgctaccatatatggacatgacatccgcaca
gagatggagcgtattcgtcagaacctgggcatgtgtccacagcacaacgtcctgtttgac
aagctgagtgttgaggagcatctgtggttctactccaggctcaaaggcatggctgaagaa
gacatacgcaaagagatggacaagatgattgttgacctggagttatccaacaagcgtcat
agcttggtgcagactttgtccggtgggatgaagaggaagttgtctgtggccatcgccttc
gttggcggttcaagggccgtcattctggacgaacccacagcgggggtggacccctacgct
cgcagggccatctgggacctcatcctcaagtataaacagggccggacaattctgctgtcc
acccaccacatggatgaagcagacctcctgggagatcgcattgccattatctcacatgga
aaactcaagtgctgcggctcgccactctttctgaagagcacctatggagacggatacaaa
ctgacgctggtcaaaaagcagtgtgaaggtcgaggacagggcagccagctacagcctccc
tcgtctctttctccctcctcctctctgtcgccttgctcagagtctcgtgtcacccagttt
attcgccagtttgtggcatcctgcctgctggtgtccgactccaacactgagctgtcttac
gtcctgccctctgaggctgtcaagaagggctgctttgagaggctgttccaggctttagag
cagagcttagacagcctggctttgaccagctttggagtgatggatacaaccctagaggag
gtcttcctcaaagtgtctgaagaggaccagtctctggagaacagtgatgctgacatgaag
ggatcaccagggggaagctcagtggggaaatcctcagtgggttcagcagtccaggggggg
ccacagggtgagactggaccttcagtaaagtgtgagaagccagaggtggaactgagtaat
ttggtgatgtgctccaggctgagcgagagccagtcctccctgaaatcctcttcgtctatc
ggctcagtgagaggggatgaagggggactctacgcagacttctacggagattactgtcca
ttgtttgacaacggccaagagtctgactctgccagtcttagaggcgatgcagagaacccc
tcgtcaccagagccggaggtcctggaggggcagggcagcttcaagttggagggctggtgg
ttaaagctaagccagtttcatggcctcatcgtcaagaggttccactgtgctaaaaggaac
accaagggcctcttctctcagatcctccttcctgccttctttgtctgtgtggccatgact
gtggctttatctgtgcctgagattggagatttgccgcccctgattttgtccccatctcaa
tatcataactatacccagcctagaggcaacttcattccttatgccaatgaaaacagacct
cagtacaggagtaagctgtcaccagatgccagcccacagaagatcatcaacacgctccgt
ctgccttcaggtgtgggtgctacctgcgtcctcaaaacccccttcaacagcaccctggac
cagctggcccagaccctcaaccccagcgccaataactccaagaccctggctgcccgctac
tttgactccatgtgtcttgactccttcacccaaggggtccctctctccaactttgtaccc
ccacctccatcaccggcaccttcagatgacccagaccctcgcttcgaagatggactgtgg
aacattacagttgcccctccaaccacggtccatgagcctgtgacatctcctcctaccctg
cccctttccgtccatgagccggtgcgttgtacctgctccatgcaggggacaggcttctcc
tgccccagtggggtaggaggccggccgcccatcatgaaggtggtgacaggtgacatcctg
gtggacatcacaggccgaaacgtttctgagtatctgctgttcacatcagacagactgcgc
ctgcacagatatggtggtttaacagtggggaacatccagaaatcaatcccagcatccttt
gggagaaacatacctccgatggttcgcaagatagcagttcgcagatcagctcaggttctg
tacaacaataagggttaccacagcatgccaacatacctgaacgtcctcaacaacgccatc
ctgcgtgccaacctgccatcatccaggggcaaccctgcagcttatggtatcacactgaca
aaccacccaatgaatcgaaccagtgccagcctctctttggactacttactccaggggaca
gatgtggtgattgccatcttcattattgtggccatgtcttttgtgccagccagctttgtg
gttttcctggttgcagagaaatccacaaaggccaaacacctgcagtttgtcagtggctgt
gaccctgtcatctactggctggctaactacatatgggacatgctgaactacctggtacct
gccacatgctgtgttattattctgtttgtgttcgacctgccagcatacacctccccaacc
aacttccctgctgtcctctcactctttcttctctacgggtggtccatcacccccatcatg
tacccagcatccttctggttcgaggttcccagtacagcttatgtgttcctcatagtcatc
aacctcttcataggcatcactgcaactgttgccacctttctgctccagctctttgaacac
gataaggatctgaaaaaagtcaacagttacctgaagtcctgtttcctcatcttccccaac
tacaaccttggccatggtctgatggagatggcctacaacgagtacataaacgaatattac
gctaaaataggccagtttgacaagatgaagtctccgtttgagtgggacattgtgactcga
ggacttgttgccatgacaattgaaggttttgttggcttcctcatcaccatcctctgtcag
tacaacttcctcaggaaacctccgagggtgccagtcagctgccagcctatagacgatgat
gatgtagatgtggcctgtgagagacgaagagtgctgcgaggagatgccgacaatgacatg
ctgaagatcgagaatctgacaaaggtgtataaatccaggaagatgggtcgtatcctggca
gtggacaggctgtgtctgggcgtccggcctggtgagtgttttggactgctgggagtgaat
ggagctgggaagaccaccacgttcaagatgctgacaggcgatgagtgcaccaccggagga
gaggccttcattaacggaaacagcatcctgaaggacctgttacgcgtgcagcagagtatc
ggctactgtccacagtttgacgctctgtttgatgatctgaccgccagggaacatctggag
ctttacacccgccttcgtggcattccttggaaggaccaggagagggtggtgcagtgggca
ttagaaaagctggagttgtctaagtatgcagacaagcctgctggcacgtacagcggagga
aacaaacgcaagctttccacttctattgctctgattggatacccatcactcatcttcctg
gatgagcccaccactgggatggatccaaaggcccgcagatttctctggaatttaattctc
gacataattaagactggacgctctgtagtgctgacatcacacagcatggaagagtgtgag
gctctgtgcacccgactgggcatcatggtaaacggcaggtttaaatgcctgggcagcatc
caacacctcaagaacaggtttggggacggctacatgatcacagtgagaaccaagagcagc
tccaacgtgaaggaggtggttcgattcttcaacagaaacttccctgaggctgtgctgaag
gagcgtcaccacaccaaggtgcagtaccagctgaagtcagagcggatctccctggctcag
gtcttcagtaagatggagcaggtggtggaagtgcttggcatcgaggactactcagtcagt
cagaccactctggacaatgtgtttgtcaactttgccaagaagcagagtgacaacctggag
cagcaggaggcgtcgccccctggtggtggacagtctcccctgcagtgcatcctcaacctg
ctgaagtcgcagccggccaacacagagctcaacactctgaccagcgaggcgccggaggag
ctggagagcgacgatgatgaaggactcatcagttttgaagaggaaagggtgcagctctcc
ttcaacacagacactctctgttga
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integrated database retrieval system
