Larimichthys crocea (large yellow croaker): 104925058
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Entry
104925058 CDS
T04659
Name
(RefSeq) Usher syndrome type-1G protein homolog isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lco03037
]
104925058
Cilium and associated proteins [BR:
lco03037
]
Primary cilia and associated proteins
USH complex and associated proteins
104925058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
ABC2_membrane_7
Motif
Other DBs
NCBI-GeneID:
104925058
NCBI-ProteinID:
XP_010736893
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All DBs
Position
XII:complement(24955022..24960831)
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AA seq
470 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAQDEDGMTPTLWAAYHGNLEALRLIVARGGNPDK
CDIWGNTPLHLAAANGHHNCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDSI
ASKQTALNTKLVNKLKDRAFRDAERRIKQCVKMQKKHHKRMERKFHKEASEASASDAMSF
SSFTGSSISHKLRNFNPASVSVPYSQATLHATNRGKTKIQKKLEKRKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYVNPKDRGHRNIRDMFPRDNYDAISRAMSEPDLHGPDV
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGLFDLGSRDEASVSGSNVRLRSRLQQYP
GLDEDSIGSAHSLQERNVVEVPWEEIELGLDDDDEPDSSPLEVFLATQSMVEFFSIFKRE
KIDLEALLLCSDNDLKSIHIPLGPRKKILDACKTRLETIEDPDCIEDTEL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtaccacaaggcggcccgggacggctacctggacctgcttaaggaggcg
actaggaaggatctcaacgcgcaggatgaggatggcatgacaccgacgttatgggctgct
tatcacggcaacctggaggctctgcggctgatcgtggcgaggggaggaaaccctgacaag
tgtgacatatgggggaacacaccgctccacctggcagctgccaatggtcaccacaactgt
cttttcttcctggtatcttttggtgccaacatatggtgtctggacaacgactatcacacg
ccgttggacatggccgccacaaagaatcacatggattgcgtccgctacctggattccatt
gcttccaagcagacagccctcaacaccaagctggtcaacaaactaaaggatcgagcgttt
cgggatgctgagcgacggatcaaacagtgtgtaaagatgcaaaagaaacaccacaaacgc
atggagcggaagtttcataaagaggcttcagaggcttctgcttcagacgccatgagcttt
tccagcttcaccggcagctctattagccacaaactgcgcaactttaatccagcttccgtc
agtgtgccatattctcaggctactctccatgccacaaaccgagggaagacaaagattcag
aagaagctggagaagaggaaacaaggagatgggacttttaaaatctacgaggatgggagg
aagagtgtccgctccctgtctggcctccagctgggcaacgatgtcatgtttgtcaaacag
gggacttacgtcaacccgaaggaccgtggccaccgcaatattcgtgacatgttccccaga
gacaattacgatgccatttcccgtgccatgagtgagccggacctccacgggccagatgtg
gactattctgagatcagcactgactctggacatgattccctgttcaaccggcccggtctg
ggcaccatggtgtttaggaggaactatgtgagtggggggttgtttgaccttggcagtcgg
gatgaggccagtgtatcaggtagtaatgtacgtctacgcagccggttgcagcaataccca
ggtctagatgaagacagcattggcagtgcacacagcctgcaggagaggaacgtggtagag
gtgccctgggaagaaatcgaattagggctggacgatgatgatgagccagactcaagccct
ctagaggtcttccttgccacacagagcatggtcgagtttttctccatcttcaagagggag
aagattgaccttgaagcactgttgctatgctctgacaatgaccttaagagtatccatatc
cccttaggaccaaggaagaagattttagatgcctgtaagacaaggctggagaccatagag
gacccagactgcattgaggacacagaactgtga
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