Larimichthys crocea (large yellow croaker): 104925094
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Entry
104925094 CDS
T04659
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104925094 (dhx35)
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104925094 (dhx35)
Spliceosome [BR:
lco03041
]
Complex C
Other components
Complex C specific factors
104925094 (dhx35)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
nSTAND3
AAA_30
AAA_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
104925094
NCBI-ProteinID:
XP_010736940
UniProt:
A0A6G0IQJ6
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All DBs
Position
XV:20851466..20858644
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AA seq
699 aa
AA seq
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MAAPLSTMKFWKPGAEAPGISEERELNTETTGSPIIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESFQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRVAE
ERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRQDLRLIVASATLDAKKFHDFFNLNESGDPNKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQDQARTLS
RYGMKKHLKILPMYSGLPYAEQMKVFERAPSTVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYNPRTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPPNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILKCIVFGFFANAARIHHSGSYRTLRDDRELHIHPNSVLFGEKPPKWVVFNEVVQTA
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctttccacgatgaaattttggaagccgggagctgaggcaccagggatc
tcagaggagagggagctcaacacagagaccaccgggtcccccatcatcttcaacccgcac
accgccctctctatagagaaacaacgacagaaactccccgttttcaagcacagaaacaac
atcttatacttagtggagagcttccagacggtcatcatagtcggtgagactggatgtggg
aagacaacacagatacctcagtacctgctggaagctggctgggcagcggaggggaaggtg
atcggagtgacacagcctcgacgtgtggctgctatctctgtagctaatcgtgtagcagag
gagcggggggccctgctgggacatgaagttggttatactatccggtttgatgactgctct
gatccccacgccacgaggatcaaattccttacagatggcatgctggtgcgggagatgatg
gctgatcctcttttgaaaaaatacagtgtgctgatgctagatgaagcccacgagagaacc
ctgtatacagacatagccatcggtctactaaagaagattcagaaaaagcggcaagacttg
aggctgattgtggcctctgccactctggatgccaagaaattccacgacttcttcaacctg
aacgagtccggagatcccaacaaggacacatgtgggattctgacagtggagggacgcacc
tttccagtggacgtcttctacactgtcagtcctgtcccagactacgtgaaggccacagtg
gaaacagtgctgaagatccatgagacagaggatgatggagatgtcctggcttttcttact
gggcaggaagaggtggagaaggtggtgtcccttctgcaggaccaggccaggactctgtca
cgatatggcatgaagaaacacctgaaaattttgcccatgtactctggtctaccttacgct
gagcagatgaaggtctttgagagggcaccctccactgttcgcaaggtcgtggtggccact
aacatagctgagacctccatcactataaatggagttgtatttgtcatcgactgtgcgttt
gtgaagttgcgagcctataatcctcgcactgccattgaatcgctggtggtcacccccatc
tccaaggcttcagccagccagagagctgggagagccggacgaaaccgacctgggaaatgc
tttagactatacacggaggaggactttgagaaactgcctgcctctactgtgccagagatg
cagcgcaccaatttggctcctgtcatcctgcagctcaaagcattaggcattgacaacgtg
ctgcggttcagcttcctttctcctcctccagctcaaaccatggttcaggctttagagctg
ctctacgctctgggaggtctggaccattacggccgtttgacagatcccatgggtgtgcgg
atggcagagtttcctctcagtcccatgtttgccaagatgctcctggagtctggaaacttt
ggctgctccaaagagattgttaccattgcagcaatgatgcagattcagaatatatttgtc
gtgccacccaatcagaagaaagctgccgctcgagagcacaggaagtttgcggtggctgag
ggagaccacctcaccatgctgaatgtgtatgaagcattcattaagcaccagaagagctcc
cagtggtgtcaggaacacttcctcaattataagggtctgctgcgggctgtgactgtacga
gagcagctccggcgtctcatgaataagtttaaggtaccacggacttccagtgaaggtgac
cctgatgtgatcttgaagtgcattgtgtttggttttttcgctaatgcagctcgcattcac
cattctggttcctaccggactttacgagacgatcgtgagcttcacatccaccccaactca
gtgctgtttggagagaaacctccaaaatgggttgttttcaatgaggtggtgcagacggca
aaatactacatgcgtgatgtgactgctgttgagtcttcctggttggttgagttggcccct
catttttacaagcaggccaagcatggttcactggccagcaagaggtcccgggtcctctaa
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