Larimichthys crocea (large yellow croaker): 104925138
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Entry
104925138 CDS
T04659
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04260
Cardiac muscle contraction
lco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104925138
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104925138
04261 Adrenergic signaling in cardiomyocytes
104925138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104925138
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104925138
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
dCache_1
VWA_3
VWA_2
MCP-like_PDC_1
WAK_assoc
VWA_CoxE
dCache_2
Motif
Other DBs
NCBI-GeneID:
104925138
NCBI-ProteinID:
XP_027134722
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Position
VI:complement(10504818..10536616)
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AA seq
1163 aa
AA seq
DB search
MLGDWRILFSHMCSTSLPLLWILVGFNVVEVAGSQQGIPLSVVKLWASAFGGEIKSISAK
YSGSQLLQKELWAITAPRPGTNSSSEASASVKGNSRINAKTSAACLWEESGATRGSPRKH
GESVQTAYRKRLQGPNLGPPCSEKYKEFEKSVRVEEIDGVKLVKTLAVKMEEVFRKKAEA
TRRLVEAAEEAHHQHEENPDLQYEYFNAVLINEVDEMGNNVELGGEFLLEPNDHFNNLSV
NLSLSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVDNFERDPTLIWQYFGSAKGFFRQYP
GVKWHPDEHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDT
LGDDDFFNIIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLDKLFAKGIGLLGEALAEA
FTILNDFNQTGRGSVCSQAIMLVTDGATEMYDDVFEKYNWPERKVRIFPYLIGRESAFAD
NLKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALSQAH
KLRDKAGPSLMTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKLIPKHMLGIHGYAF
AITNNGYILTHPDLRPLYQDGQKRRKPNYSSVDLSEVEWEDKDDALRNAMVNRRTGTFSM
EVKKTVDRGRRVLKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSVEAGLRDLEQP
DVALADEWTYCNTEEQHEHRHLTQIQAIKLFMTGRRQHLKCDRELIQEVLFDAVVTAPLE
AYWTGLALNKSENSDKGVEIAFLGTRTGLSRTNLFVPADQLSNQDFLTAEDKEGVFNADH
FPLWYKRAAEQVPGTFVYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLEF
FQRKFWTACRQCTALDGKCSISCDNDDINCYLIDNNGFILVTEEQSQTGLFFGQVEGAVM
NKLLQMGSFKRITLYDYQALCKEYAGSSDSARTLSDPFTVVKWLLTELVIFLLEFNLYSW
WNIDLSVKAQRSRGKTMMVPCDTEYPAFVSERTIKETTGNIDCEGCVRSFVIQQIPSSNL
FMVVVDNKCDCSSAPPVTMDPIEIMYNESLKCDRLKFQKDRKKPESCHPFHPEENAMECG
SATRLSSTLTAALLPLIAATISR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtgactggaggatcctgttctcgcacatgtgcagcaccagtctccccctgctc
tggatcctcgtcggcttcaatgtggtggaggtggcggggtcccagcaagggatccctctg
tcagtcgtaaagctctgggcctcagcgtttggtggagaaattaaatcaatttctgcaaaa
tattctggatctcaactactgcaaaaggagctatgggctatcacagcgccgcgtccgggg
accaactccagttctgaggccagtgcctcggtcaagggcaatagcaggattaatgctaaa
acctctgctgcatgtctgtgggaggaaagcggagcaaccagaggaagtccacgcaaacat
ggggagagcgttcaaactgcgtatagaaagcggctccagggtccaaacctaggacctcct
tgctctgagaaatataaagaatttgaaaagtcagtcagagtggaagaaatcgatggtgtg
aaactggtcaaaactctggccgtgaagatggaggaagtgtttcggaaaaaagcagaggcc
accaggcggctggtggaggcggcagaagaagcgcaccatcagcatgaggaaaatcctgac
ctgcagtatgagtacttcaacgctgtgctgatcaatgaggtggacgagatgggcaataac
gtagagctgggtggagagttcctcctggagcccaacgaccatttcaataacctgtcagtc
aacttgagcctcagtgtggtgcaggtgcccaccaacatgtacaacaaagatcctgacata
gtgaatggagtttactggtcggaggctctgaataaagtattcgtagataattttgaaaga
gacccgacactgatctggcagtactttgggagcgccaagggtttcttcaggcagtaccca
ggagtgaagtggcatccagatgaacacggtgtaattggctttgactgtagaaacaggaag
tggtacattcaggcagcaacgtctcctaaggatgttgtcatcttagtcgatgttagtgga
agcatgaaaggattgaggctgaccatcgccaggcagactgtctcctccatattagacaca
cttggtgatgacgacttcttcaatatcattgcatataatcaggagatccactacgtggag
ccttgtttgaatggcacgctggtccgagccgacagaaccaataaagatcatttccgtgag
catctagataagctgtttgccaaagggatcgggctcctgggtgaagctctggccgaagcg
ttcacaatcctgaatgattttaatcaaactggacggggcagtgtgtgcagccaagccata
atgctcgtgactgacggggcgacagaaatgtatgatgacgtttttgaaaagtacaattgg
ccagaaagaaaggtgcgaatattcccttacctgattggacgagagtctgcatttgctgat
aacctcaaatggatggcttgtgccaacaaaggatattttagtcagatctccacattggca
gacgttcaggagaatgtgatgaggtatcttcatgtcatgagccgcccaaaggttattgac
cacgagcacgacacagtgtggacggaagcttacgtggacagtgctctttcccaggctcat
aagttgagagacaaagccggcccaagtctgatgactacagtcgccatgcctgtcttcagc
acaaagaatgaaacgaagaaccagggtattctgttgggcgtcgttggaacagacatccct
ctgcaggagctgatgaagctcatccccaaacatatgttaggaatccatgggtacgcattt
gctatcacaaacaacggctacatcctgacacacccggacctcagacctttgtatcaggac
ggtcagaagaggagaaagcccaactacagcagcgtggatctctctgaggtggagtgggag
gacaaagacgatgctctgcgcaacgctatggtgaataggaggacagggactttctctatg
gaggtgaagaagacagtggatagagggagacgtgtcctgaagatgcacaatgactattac
tacactgacatcaaagggacaccattcagtgtcggagtggctctctccagaggtcatgga
aaatacttcttcagaggaaatgtgtcagttgaagccgggctccgtgatctggaacagcca
gatgtcgccctggcagatgaatggacttactgcaacacagaggagcagcacgagcaccgt
cacctgacccagattcaagcgatcaagctcttcatgacgggccgcagacaacacctcaaa
tgtgacagagagctgatccaggaggtgttatttgatgctgtggtcactgctccactggag
gcctactggactggactggctctcaacaaatcagagaactcagacaaaggagtggagatt
gctttcctgggtacacgcactggcctgtcaagaaccaacttgtttgtacccgccgatcaa
ctctccaatcaagattttctgacagcggaggacaaggaaggagtgtttaatgctgatcac
ttccctctgtggtacaagagagcggcagagcaggtccccggcacatttgtctactccatt
cccttcagcacagctctagaaaataagagcgtggttttggccagcacagcaattcagctc
cttgatgacagaaagtctccaattgttgcagctgttgggatccagatgaagcttgagttc
tttcagaggaagttctggactgcctgcagacagtgtacagctctggacggaaagtgtagt
atcagctgtgataacgacgacattaactgttatctcattgataacaatggcttcattctt
gtcacagaggagcaatctcagacagggctcttctttggacaggtggagggtgctgttatg
aataaacttctccaaatgggctcctttaaaaggatcacactgtatgactaccaggccctt
tgcaaagagtatgctgggagcagtgatagtgcacgcactttatcagatcccttcactgtt
gttaagtggctcctgactgaacttgtcatttttctgttagagtttaacctgtacagctgg
tggaatatcgacctttcggttaaagctcagagatctcggggtaaaaccatgatggtgccg
tgtgacacagaatatcctgccttcgtctctgaacgcaccatcaaagaaaccacaggcaac
attgactgtgagggctgtgtcagatcttttgtcatacagcagattcccagcagcaacctc
ttcatggttgttgtggacaataagtgtgactgcagcagtgctcctccagtaaccatggat
cccattgagatcatgtacaacgagtcactaaaatgtgacagactgaagtttcagaaggac
agaaagaagcctgaatcatgtcatcctttccatccggaggaaaatgccatggagtgtggt
tcagcaacacgcctttccagtactctaacagcagctctgctccctctgatagcagcaacc
atcagcaggtga
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